RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 SLC39A12Q504Y0 691 aa16.15■□□□□ 0.18
USB1-214ENST00000568848 SDHAF4Q5VUM1 108 aa16.15■□□□□ 0.18
USB1-214ENST00000568848 ERICH6BQ5W0A0 696 aa16.15■□□□□ 0.18
USB1-214ENST00000568848 SCARA3Q6AZY7 606 aa16.15■□□□□ 0.18
USB1-214ENST00000568848 IL31Q6EBC2 164 aa16.15■□□□□ 0.18
USB1-214ENST00000568848 USP37Q86T82 979 aa16.15■□□□□ 0.18
USB1-214ENST00000568848 WDR5BQ86VZ2 330 aa16.15■□□□□ 0.18
USB1-214ENST00000568848 TTC16Q8NEE8 873 aa16.15■□□□□ 0.18
USB1-214ENST00000568848 SLC46A2Q9BY10 475 aa16.15■□□□□ 0.18
USB1-214ENST00000568848 FOXP1Q9H334 677 aaPredicted RBP16.15■□□□□ 0.18
USB1-214ENST00000568848 C8orf33Q9H7E9 229 aaPredicted RBP16.15■□□□□ 0.18
USB1-214ENST00000568848 HPS4Q9NQG7 708 aa16.15■□□□□ 0.18
USB1-214ENST00000568848 INVSQ9Y283 1065 aa16.15■□□□□ 0.18
USB1-214ENST00000568848 ZZEF1O43149 2961 aa16.15■□□□□ 0.18
USB1-214ENST00000568848 SPEGQ15772 3267 aa16.14■□□□□ 0.18
USB1-214ENST00000568848 WDFY3Q8IZQ1 3526 aa16.14■□□□□ 0.17
USB1-214ENST00000568848 GIPC1O14908 333 aa16.14■□□□□ 0.17
USB1-214ENST00000568848 TOP3BO95985 862 aaKnown RBP16.14■□□□□ 0.17
USB1-214ENST00000568848 PMLP29590 882 aa16.14■□□□□ 0.17
USB1-214ENST00000568848 LRPAP1P30533 357 aa16.14■□□□□ 0.17
USB1-214ENST00000568848 ALDH1A3P47895 512 aa16.14■□□□□ 0.17
USB1-214ENST00000568848 MCL1Q07820 350 aa16.14■□□□□ 0.17
USB1-214ENST00000568848 STRN3Q13033 797 aa16.14■□□□□ 0.17
USB1-214ENST00000568848 GPR17Q13304 367 aa16.14■□□□□ 0.17
USB1-214ENST00000568848 CCDC142Q17RM4 750 aa16.14■□□□□ 0.17
USB1-214ENST00000568848 JADE1Q6IE81 842 aa16.14■□□□□ 0.17
USB1-214ENST00000568848 LEMD2Q8NC56 503 aa16.14■□□□□ 0.17
USB1-214ENST00000568848 FBXO18Q8NFZ0 1043 aa16.14■□□□□ 0.17
USB1-214ENST00000568848 BPIFB1Q8TDL5 484 aa16.14■□□□□ 0.17
USB1-214ENST00000568848 PSMG2Q969U7 264 aa16.14■□□□□ 0.17
USB1-214ENST00000568848 BICD1Q96G01 975 aa16.14■□□□□ 0.17
USB1-214ENST00000568848 SENP8Q96LD8 212 aa16.14■□□□□ 0.17
USB1-214ENST00000568848 DRC1Q96MC2 740 aa16.14■□□□□ 0.17
USB1-214ENST00000568848 IER2Q9BTL4 223 aa16.14■□□□□ 0.17
USB1-214ENST00000568848 EBF3Q9H4W6 596 aa16.14■□□□□ 0.17
USB1-214ENST00000568848 GKN1Q9NS71 199 aa16.14■□□□□ 0.17
USB1-214ENST00000568848 AKAP13Q12802 2813 aa16.14■□□□□ 0.17
USB1-214ENST00000568848 TM4SF5O14894 197 aa16.13■□□□□ 0.17
USB1-214ENST00000568848 CLDN3O15551 220 aa16.13■□□□□ 0.17
USB1-214ENST00000568848 FAM189A1O60320 539 aa16.13■□□□□ 0.17
USB1-214ENST00000568848 LRP3O75074 770 aa16.13■□□□□ 0.17
USB1-214ENST00000568848 RPP40O75818 363 aaKnown RBP16.13■□□□□ 0.17
USB1-214ENST00000568848 PAPSS2O95340 614 aaPredicted RBP16.13■□□□□ 0.17
USB1-214ENST00000568848 PLS3P13797 630 aa16.13■□□□□ 0.17
USB1-214ENST00000568848 HOXB3P14651 431 aaPredicted RBP16.13■□□□□ 0.17
USB1-214ENST00000568848 MUTP22033 750 aa16.13■□□□□ 0.17
USB1-214ENST00000568848 DHX8Q14562 1220 aaKnown RBP16.13■□□□□ 0.17
USB1-214ENST00000568848 MGAT5BQ3V5L5 792 aa16.13■□□□□ 0.17
USB1-214ENST00000568848 DGKKQ5KSL6 1271 aa16.13■□□□□ 0.17
USB1-214ENST00000568848 STPG1Q5TH74 334 aa16.13■□□□□ 0.17
USB1-214ENST00000568848 KRT79Q5XKE5 535 aa16.13■□□□□ 0.17
USB1-214ENST00000568848 TMEM150AQ86TG1 271 aa16.13■□□□□ 0.17
USB1-214ENST00000568848 LRRTM3Q86VH5 581 aa16.13■□□□□ 0.17
USB1-214ENST00000568848 RALGPS2Q86X27 583 aaPredicted RBP16.13■□□□□ 0.17
USB1-214ENST00000568848 C12orf50Q8NA57 414 aaPredicted RBP16.13■□□□□ 0.17
USB1-214ENST00000568848 EZH1Q92800 747 aaPredicted RBP16.13■□□□□ 0.17
USB1-214ENST00000568848 OBSL1O75147 1896 aa16.13■□□□□ 0.17
USB1-214ENST00000568848 ZNF638Q14966 1978 aaKnown RBP16.13■□□□□ 0.17
USB1-214ENST00000568848 OR6C75A6NL08 312 aa16.12■□□□□ 0.17
USB1-214ENST00000568848 TULP1O00294 542 aaPredicted RBP16.12■□□□□ 0.17
USB1-214ENST00000568848 RNF40O75150 1001 aa16.12■□□□□ 0.17
USB1-214ENST00000568848 EPN2O95208 641 aa16.12■□□□□ 0.17
USB1-214ENST00000568848 CCDC192P0DO97 292 aa16.12■□□□□ 0.17
USB1-214ENST00000568848 PPP2R3AQ06190 1150 aa16.12■□□□□ 0.17
USB1-214ENST00000568848 ARHGAP29Q52LW3 1261 aa16.12■□□□□ 0.17
USB1-214ENST00000568848 ARSHQ5FYA8 562 aa16.12■□□□□ 0.17
USB1-214ENST00000568848 SLC39A4Q6P5W5 647 aa16.12■□□□□ 0.17
USB1-214ENST00000568848 GAB3Q8WWW8 586 aa16.12■□□□□ 0.17
USB1-214ENST00000568848 TMLHEQ9NVH6 421 aa16.12■□□□□ 0.17
USB1-214ENST00000568848 ANGPTL2Q9UKU9 493 aa16.12■□□□□ 0.17
USB1-214ENST00000568848 UBQLN1Q9UMX0 589 aaKnown RBP16.12■□□□□ 0.17
USB1-214ENST00000568848 RBM19Q9Y4C8 960 aaKnown RBP16.12■□□□□ 0.17
USB1-214ENST00000568848 ABCA7Q8IZY2 2146 aa16.12■□□□□ 0.17
USB1-214ENST00000568848 BAHCC1Q9P281 2608 aa16.12■□□□□ 0.17
USB1-214ENST00000568848 MYO16Q9Y6X6 1858 aa16.12■□□□□ 0.17
USB1-214ENST00000568848 C1QTNF9BB2RNN3 333 aa16.11■□□□□ 0.17
USB1-214ENST00000568848 HCRTO43612 131 aa16.11■□□□□ 0.17
USB1-214ENST00000568848 CLTAP09496 248 aa16.11■□□□□ 0.17
USB1-214ENST00000568848 C1QTNF9P0C862 333 aa16.11■□□□□ 0.17
USB1-214ENST00000568848 GUCY2CP25092 1073 aa16.11■□□□□ 0.17
USB1-214ENST00000568848 SLC12A3P55017 1021 aa16.11■□□□□ 0.17
USB1-214ENST00000568848 LILRA4P59901 499 aa16.11■□□□□ 0.17
USB1-214ENST00000568848 ITPRIPL2Q3MIP1 535 aa16.11■□□□□ 0.17
USB1-214ENST00000568848 C9orf57Q5W0N0 161 aa16.11■□□□□ 0.17
USB1-214ENST00000568848 TXNDC8Q6A555 127 aa16.11■□□□□ 0.17
USB1-214ENST00000568848 PSAPL1Q6NUJ1 521 aa16.11■□□□□ 0.17
USB1-214ENST00000568848 MAB21L3Q8N8X9 362 aa16.11■□□□□ 0.17
USB1-214ENST00000568848 SPIRE2Q8WWL2 714 aa16.11■□□□□ 0.17
USB1-214ENST00000568848 GPR88Q9GZN0 384 aa16.11■□□□□ 0.17
USB1-214ENST00000568848 TASP1Q9H6P5 420 aa16.11■□□□□ 0.17
USB1-214ENST00000568848 ABI2Q9NYB9 513 aaPredicted RBP16.11■□□□□ 0.17
USB1-214ENST00000568848 NOL7Q9UMY1 257 aaKnown RBP16.11■□□□□ 0.17
USB1-214ENST00000568848 TCHHQ07283 1943 aa16.11■□□□□ 0.17
USB1-214ENST00000568848 DENND4CQ5VZ89 1909 aa16.11■□□□□ 0.17
USB1-214ENST00000568848 ATRXP46100 2492 aa16.1■□□□□ 0.17
USB1-214ENST00000568848 ANKRD63C9JTQ0 380 aa16.1■□□□□ 0.17
USB1-214ENST00000568848 PLA2G4BP0C869 781 aa16.1■□□□□ 0.17
USB1-214ENST00000568848 CNR2P34972 360 aa16.1■□□□□ 0.17
USB1-214ENST00000568848 MPLP40238 635 aa16.1■□□□□ 0.17
USB1-214ENST00000568848 RAP1GAPP47736 663 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms