RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 MCL1Q07820 350 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 MAPK7Q13164 816 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 VEPH1Q14D04 833 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 TMEM196Q5HYL7 178 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 TTC38Q5R3I4 469 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 ARMCX5Q6P1M9 558 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 UNQ6494/PRO21346Q6UXR6 183 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 ZPBP2Q6X784 338 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 DSTYKQ6XUX3 929 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 CAMKK1Q8N5S9 505 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 TTC9BQ8N6N2 239 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 KIF12Q96FN5 646 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 RUSC1Q9BVN2 902 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 TIPINQ9BVW5 301 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 RAB34Q9BZG1 259 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 SMOC1Q9H4F8 434 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 ZMYM5Q9UJ78 669 aa12.83□□□□□ -0.36
GTF3C1-209ENST00000568569 IGF2RP11717 2491 aa12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 TTC26A0AVF1 554 aa12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 SOAT2O75908 522 aa12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 ODC1P11926 461 aa12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 TRAPPC10P48553 1259 aa12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 TUFMP49411 452 aaKnown RBP12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 CYP4F8P98187 520 aa12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 PPP2R3AQ06190 1150 aa12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 PDIA5Q14554 519 aa12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 KARSQ15046 597 aaKnown RBP12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 ELF2Q15723 593 aa12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 ZBTB6Q15916 424 aa12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 PLK5Q496M5 336 aa12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 TCEAL6Q6IPX3 200 aa12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 FSTL4Q6MZW2 842 aa12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 RINT1Q6NUQ1 792 aa12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 TMEM130Q8N3G9 435 aa12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 SPIRE2Q8WWL2 714 aa12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 TCEAL3Q969E4 200 aa12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 SEPT5Q99719 369 aaPredicted RBP12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 NTPCRQ9BSD7 190 aaKnown RBP12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 EDEM2Q9BV94 578 aa12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 FOXP1Q9H334 677 aaPredicted RBP12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 SH2B1Q9NRF2 756 aaPredicted RBP12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 GKN1Q9NS71 199 aa12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 KCNG1Q9UIX4 513 aa12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 GREB1Q4ZG55 1949 aa12.82□□□□□ -0.36
GTF3C1-209ENST00000568569 WDFY3Q8IZQ1 3526 aa12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 SFI1A8K8P3 1242 aa12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 C1QTNF9BB2RNN3 333 aa12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 E9PMD0 336 aa12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 TRDMT1O14717 391 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 RNF40O75150 1001 aa12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 C1QTNF9P0C862 333 aa12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 PAX3P23760 479 aa12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 GUCY2CP25092 1073 aa12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 MATR3P43243 847 aaKnown RBP eCLIP12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 NOVA1P51513 510 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 SMTNP53814 917 aa12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 AMPD2Q01433 879 aa12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 RUNX3Q13761 415 aa12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 MGAT5BQ3V5L5 792 aa12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 C1orf186Q6ZWK4 172 aa12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 CMTM8Q8IZV2 173 aa12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 IGSF22Q8N9C0 903 aa12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 TMEM161BQ8NDZ6 487 aa12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 C8orf76Q96K31 380 aa12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 HHIPQ96QV1 700 aa12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 LPIN3Q9BQK8 851 aa12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 FAM83CQ9BQN1 747 aa12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 SMG9Q9H0W8 520 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 IL21Q9HBE4 155 aa12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 HPS4Q9NQG7 708 aa12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 SPAG17Q6Q759 2223 aa12.81□□□□□ -0.36
GTF3C1-209ENST00000568569 CITO14578 2027 aa12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 RHOBTB1O94844 696 aa12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 CAVIN2O95810 425 aa12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 EGFP01133 1207 aa12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 MAPTP10636 758 aaKnown RBP12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 PLS3P13797 630 aa12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 ATF6P18850 670 aa12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 DRD1P21728 446 aa12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 AVPR1AP37288 418 aa12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 ZNF252P-AS1Q0IIN9 211 aa12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 TAF12Q16514 161 aa12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 KYAT1Q16773 422 aa12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 FBXO43Q4G163 708 aa12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 DAB2IPQ5VWQ8 1189 aa12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 KRT79Q5XKE5 535 aa12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 C4orf32Q8N8J7 132 aa12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 KDF1Q8NAX2 398 aaPredicted RBP12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 OR10T2Q8NGX3 314 aa12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 EXOC4Q96A65 974 aa12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 CHFRQ96EP1 664 aa12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 BICD1Q96G01 975 aa12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 TSPAN18Q96SJ8 248 aa12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 SLC46A2Q9BY10 475 aa12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 EBF3Q9H4W6 596 aa12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 KIF9Q9HAQ2 790 aa12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 ZMIZ1Q9ULJ6 1067 aa12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 NOL7Q9UMY1 257 aaKnown RBP12.8□□□□□ -0.36
GTF3C1-209ENST00000568569 PDCD11Q14690 1871 aaKnown RBP12.79□□□□□ -0.36
GTF3C1-209ENST00000568569 OTOL1A6NHN0 477 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms