RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 ING5Q8WYH8 240 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 EEF2KMTQ96G04 330 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 BORCS6Q96GS4 357 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 CRISPLD1Q9H336 500 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 ARHGEF3Q9NR81 526 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 SIX4Q9UIU6 781 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 C2CD2Q9Y426 696 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 CACNA1AO00555 2505 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 MYO15AQ9UKN7 3530 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 CEP250Q9BV73 2442 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 ZNF233A6NK53 670 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 H7C4K7 107 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 PRRG1O14668 218 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 EXOC3O60645 756 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 ABLIM3O94929 683 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 VNN2O95498 520 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 LDHAP00338 332 aaKnown RBP10.25□□□□□ -0.77
SF3B3-211ENST00000568291 LAMP2P13473 410 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 ELF1P32519 619 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 AARSP49588 968 aaKnown RBP eCLIP10.25□□□□□ -0.779e-8■■■□□ 16
SF3B3-211ENST00000568291 FOXK2Q01167 660 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 BFSP1Q12934 665 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 SNW1Q13573 536 aaKnown RBP10.25□□□□□ -0.77
SF3B3-211ENST00000568291 SNRNP35Q16560 246 aaKnown RBP10.25□□□□□ -0.77
SF3B3-211ENST00000568291 OVOS1Q6IE37 1185 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 SLC8B1Q6J4K2 584 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 ZNF280DQ6N043 979 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 PDXDC1Q6P996 788 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 HS6ST3Q8IZP7 471 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 FMR1NBQ8N0W7 255 aaPredicted RBP10.25□□□□□ -0.77
SF3B3-211ENST00000568291 ATAD1Q8NBU5 361 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 APPL2Q8NEU8 664 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 OR10T2Q8NGX3 314 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 CXorf38Q8TB03 319 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 ITFG1Q8TB96 612 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 PLEKHO2Q8TD55 490 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 ZNF516Q92618 1163 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 GZF1Q9H116 711 aaPredicted RBP10.25□□□□□ -0.77
SF3B3-211ENST00000568291 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.25□□□□□ -0.77
SF3B3-211ENST00000568291 DNMT3BQ9UBC3 853 aaKnown RBP10.25□□□□□ -0.77
SF3B3-211ENST00000568291 DERAQ9Y315 318 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 NUMBLQ9Y6R0 609 aa10.25□□□□□ -0.77
SF3B3-211ENST00000568291 KPNA7A9QM74 516 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 ANHXE9PGG2 379 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 OAZ2O95190 189 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 CST3P01034 146 aaPredicted RBP10.24□□□□□ -0.77
SF3B3-211ENST00000568291 DCNP07585 359 aaKnown RBP10.24□□□□□ -0.77
SF3B3-211ENST00000568291 HNRNPA1P09651 372 aaKnown RBP eCLIP10.24□□□□□ -0.77
SF3B3-211ENST00000568291 TMEM191BP0C7N4 346 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 ODC1P11926 461 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 ATF2P15336 505 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 GJA1P17302 382 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 TNNI1P19237 187 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 FSHRP23945 695 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 ACAT1P24752 427 aaKnown RBP10.24□□□□□ -0.77
SF3B3-211ENST00000568291 TAF6P49848 677 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 DLG4P78352 724 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 CYP24A1Q07973 514 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 DUSP4Q13115 394 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 BMT2Q1RMZ1 405 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 HS2ST1Q7LGA3 356 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 LRRTM3Q86VH5 581 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 GPIHBP1Q8IV16 184 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 XXYLT1Q8NBI6 393 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 STKLD1Q8NE28 680 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 ENGASEQ8NFI3 743 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 TCEAL4Q96EI5 215 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 LPIN3Q9BQK8 851 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 CORO1BQ9BR76 489 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 RPP25Q9BUL9 199 aaKnown RBP10.24□□□□□ -0.77
SF3B3-211ENST00000568291 KCTD10Q9H3F6 313 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.24□□□□□ -0.77
SF3B3-211ENST00000568291 SLC2A4RGQ9NR83 387 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 INTS13Q9NVM9 706 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 USP25Q9UHP3 1055 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 R4GN57 208 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 VPS13AQ96RL7 3174 aa10.24□□□□□ -0.77
SF3B3-211ENST00000568291 XYLBO75191 536 aa10.23□□□□□ -0.77
SF3B3-211ENST00000568291 ID4P47928 161 aa10.23□□□□□ -0.77
SF3B3-211ENST00000568291 RBP5P82980 135 aa10.23□□□□□ -0.77
SF3B3-211ENST00000568291 TWF1Q12792 350 aa10.23□□□□□ -0.77
SF3B3-211ENST00000568291 PSMD2Q13200 908 aa10.23□□□□□ -0.77
SF3B3-211ENST00000568291 SLC5A9Q2M3M2 681 aa10.23□□□□□ -0.77
SF3B3-211ENST00000568291 SLC39A12Q504Y0 691 aa10.23□□□□□ -0.77
SF3B3-211ENST00000568291 CEP135Q66GS9 1140 aa10.23□□□□□ -0.77
SF3B3-211ENST00000568291 PHLDB3Q6NSJ2 640 aa10.23□□□□□ -0.77
SF3B3-211ENST00000568291 ZC3H14Q6PJT7 736 aaKnown RBP10.23□□□□□ -0.77
SF3B3-211ENST00000568291 OSTM1Q86WC4 334 aa10.23□□□□□ -0.77
SF3B3-211ENST00000568291 PDCL2Q8N4E4 241 aa10.23□□□□□ -0.77
SF3B3-211ENST00000568291 PJA1Q8NG27 643 aa10.23□□□□□ -0.77
SF3B3-211ENST00000568291 CACTINQ8WUQ7 758 aaKnown RBP10.23□□□□□ -0.77
SF3B3-211ENST00000568291 MCRS1Q96EZ8 462 aa10.23□□□□□ -0.77
SF3B3-211ENST00000568291 FOXQ1Q9C009 403 aa10.23□□□□□ -0.77
SF3B3-211ENST00000568291 TMLHEQ9NVH6 421 aa10.23□□□□□ -0.77
SF3B3-211ENST00000568291 CEP72Q9P209 647 aa10.23□□□□□ -0.77
SF3B3-211ENST00000568291 CDH7Q9ULB5 785 aa10.23□□□□□ -0.77
SF3B3-211ENST00000568291 L1RE1Q9UN81 338 aa10.23□□□□□ -0.77
SF3B3-211ENST00000568291 INSL5Q9Y5Q6 135 aa10.23□□□□□ -0.77
SF3B3-211ENST00000568291 SNX9Q9Y5X1 595 aa10.23□□□□□ -0.77
SF3B3-211ENST00000568291 ZFP37Q9Y6Q3 630 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms