RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 PCBP1Q15365 356 aaKnown RBP eCLIP14.16□□□□□ -0.14
LINC00563-201ENST00000566370 STILQ15468 1287 aa14.16□□□□□ -0.14
LINC00563-201ENST00000566370 TTC27Q6P3X3 843 aa14.16□□□□□ -0.14
LINC00563-201ENST00000566370 SCARA5Q6ZMJ2 495 aa14.16□□□□□ -0.14
LINC00563-201ENST00000566370 FBXO25Q8TCJ0 367 aa14.16□□□□□ -0.14
LINC00563-201ENST00000566370 FRMD8P1Q9BZ68 369 aaPredicted RBP14.16□□□□□ -0.14
LINC00563-201ENST00000566370 ABHD16BQ9H3Z7 469 aa14.16□□□□□ -0.14
LINC00563-201ENST00000566370 ZNF408Q9H9D4 720 aa14.16□□□□□ -0.14
LINC00563-201ENST00000566370 PDGFCQ9NRA1 345 aa14.16□□□□□ -0.14
LINC00563-201ENST00000566370 NXF1Q9UBU9 619 aaKnown RBP14.16□□□□□ -0.14
LINC00563-201ENST00000566370 ITGA11Q9UKX5 1188 aa14.16□□□□□ -0.14
LINC00563-201ENST00000566370 KIAA1257Q9ULG3 409 aa14.16□□□□□ -0.14
LINC00563-201ENST00000566370 MCM3APO60318 1980 aa14.16□□□□□ -0.14
LINC00563-201ENST00000566370 TMEM191CA6NGB0 347 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 H0YGN5 161 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 KRT7P08729 469 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 CXCL8P10145 99 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 YBX3P16989 372 aaKnown RBP eCLIP14.15□□□□□ -0.14
LINC00563-201ENST00000566370 GJC1P36383 396 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 MDH1P40925 334 aaKnown RBP14.15□□□□□ -0.14
LINC00563-201ENST00000566370 ASPAP45381 313 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 PPP2R2AP63151 447 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 MYO1EQ12965 1108 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 IRF5Q13568 498 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 TMEM132DQ14C87 1099 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 SIX1Q15475 284 aaPredicted RBP14.15□□□□□ -0.14
LINC00563-201ENST00000566370 DGKDQ16760 1214 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 WDR72Q3MJ13 1102 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 IQSEC1Q6DN90 963 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 TAPT1Q6NXT6 567 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 MTHFD1LQ6UB35 978 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 MAMDC4Q6UXC1 1216 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 TAOK1Q7L7X3 1001 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 GSTA5Q7RTV2 222 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 NIPA2Q8N8Q9 360 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 C2orf69Q8N8R5 385 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 BCAS4Q8TDM0 211 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 C1orf54Q8WWF1 131 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 FAM84AQ96KN4 292 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 ACAP3Q96P50 834 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 CCDC77Q9BR77 488 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 TMEM109Q9BVC6 243 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 TRAIPQ9BWF2 469 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 BCO2Q9BYV7 579 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 TXLNGYQ9BZA5 131 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 ROPN1BQ9BZX4 212 aaPredicted RBP14.15□□□□□ -0.14
LINC00563-201ENST00000566370 ROPN1Q9HAT0 212 aaPredicted RBP14.15□□□□□ -0.14
LINC00563-201ENST00000566370 GRHL1Q9NZI5 618 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 C2CD2Q9Y426 696 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 NFS1Q9Y697 457 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 A0A087WZ62 844 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 H3BRB1 525 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 NDUFAB1O14561 156 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 RGS16O15492 202 aaPredicted RBP14.15□□□□□ -0.14
LINC00563-201ENST00000566370 B4GALT5O43286 388 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 STAU1O95793 577 aaKnown RBP14.15□□□□□ -0.14
LINC00563-201ENST00000566370 AGTP01019 485 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 CALCAP01258 141 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 WEE2P0C1S8 567 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 RALAP11233 206 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 HPDP32754 393 aaPredicted RBP14.15□□□□□ -0.14
LINC00563-201ENST00000566370 PTPN7P35236 360 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 ADCY8P40145 1251 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 ATP1A2P50993 1020 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 RBP5P82980 135 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 NFX1Q12986 1120 aaKnown RBP14.15□□□□□ -0.14
LINC00563-201ENST00000566370 ACAP1Q15027 740 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 EEF1DP3Q658K8 133 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 ZDHHC24Q6UX98 284 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 POLNQ7Z5Q5 900 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 PLEKHH3Q7Z736 793 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 PHLDB2Q86SQ0 1253 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 SH2D3CQ8N5H7 860 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 TTC13Q8NBP0 860 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 OR6J1Q8NGC5 347 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 AFG1LQ8WV93 481 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 PGM2Q96G03 612 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 MCEEQ96PE7 176 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 FDXACB1Q9BRP7 624 aaPredicted RBP14.15□□□□□ -0.14
LINC00563-201ENST00000566370 RNPEPQ9H4A4 650 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 PDZD7Q9H5P4 517 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 TUT1Q9H6E5 874 aaKnown RBP14.15□□□□□ -0.14
LINC00563-201ENST00000566370 VRTNQ9H8Y1 702 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 RSPH14Q9UHP6 348 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 ANAPC5Q9UJX4 755 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 DERAQ9Y315 318 aa14.15□□□□□ -0.14
LINC00563-201ENST00000566370 SLC15A5A6NIM6 579 aa14.14□□□□□ -0.15
LINC00563-201ENST00000566370 TTLL13PA6NNM8 815 aa14.14□□□□□ -0.15
LINC00563-201ENST00000566370 LACTBL1A8MY62 500 aa14.14□□□□□ -0.15
LINC00563-201ENST00000566370 VDRP11473 427 aa14.14□□□□□ -0.15
LINC00563-201ENST00000566370 ATF7P17544 494 aaPredicted RBP14.14□□□□□ -0.15
LINC00563-201ENST00000566370 GJA5P36382 358 aa14.14□□□□□ -0.15
LINC00563-201ENST00000566370 FLT3P36888 993 aa14.14□□□□□ -0.15
LINC00563-201ENST00000566370 YARSP54577 528 aaKnown RBP14.14□□□□□ -0.15
LINC00563-201ENST00000566370 GSCP56915 257 aaPredicted RBP14.14□□□□□ -0.15
LINC00563-201ENST00000566370 PDCLQ13371 301 aa14.14□□□□□ -0.15
LINC00563-201ENST00000566370 SNX1Q13596 522 aa14.14□□□□□ -0.15
LINC00563-201ENST00000566370 ZNF268Q14587 947 aaPredicted RBP14.14□□□□□ -0.15
LINC00563-201ENST00000566370 GRIK4Q16099 956 aa14.14□□□□□ -0.15
LINC00563-201ENST00000566370 FAM110CQ1W6H9 321 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms