RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 AMPD2Q01433 879 aa18.22■□□□□ 0.51
CLK3-217ENST00000566126 TMEM132AQ24JP5 1023 aa18.22■□□□□ 0.51
CLK3-217ENST00000566126 ARHGAP15Q53QZ3 475 aa18.22■□□□□ 0.51
CLK3-217ENST00000566126 NCAPH2Q6IBW4 605 aa18.22■□□□□ 0.51
CLK3-217ENST00000566126 DHX32Q7L7V1 743 aaKnown RBP18.22■□□□□ 0.51
CLK3-217ENST00000566126 MINDY1Q8N5J2 469 aa18.22■□□□□ 0.51
CLK3-217ENST00000566126 RIN3Q8TB24 985 aa18.22■□□□□ 0.51
CLK3-217ENST00000566126 RLN3Q8WXF3 142 aa18.22■□□□□ 0.51
CLK3-217ENST00000566126 SLC46A2Q9BY10 475 aa18.22■□□□□ 0.51
CLK3-217ENST00000566126 CCL26Q9Y258 94 aa18.22■□□□□ 0.51
CLK3-217ENST00000566126 SPTA1P02549 2419 aa18.22■□□□□ 0.51
CLK3-217ENST00000566126 ANTXRLA6NF34 631 aa18.21■□□□□ 0.51
CLK3-217ENST00000566126 SH3BP5O60239 455 aa18.21■□□□□ 0.51
CLK3-217ENST00000566126 P2RY2P41231 377 aa18.21■□□□□ 0.51
CLK3-217ENST00000566126 RARRES1P49788 294 aa18.21■□□□□ 0.51
CLK3-217ENST00000566126 PSMD2Q13200 908 aa18.21■□□□□ 0.51
CLK3-217ENST00000566126 NTRK3Q16288 839 aa18.21■□□□□ 0.51
CLK3-217ENST00000566126 DCAF4L1Q3SXM0 396 aa18.21■□□□□ 0.51
CLK3-217ENST00000566126 XKR4Q5GH76 650 aa18.21■□□□□ 0.51
CLK3-217ENST00000566126 ALKAL1Q6UXT8 129 aa18.21■□□□□ 0.51
CLK3-217ENST00000566126 ZBTB8OSQ8IWT0 167 aa18.21■□□□□ 0.51
CLK3-217ENST00000566126 SCUBE3Q8IX30 993 aa18.21■□□□□ 0.51
CLK3-217ENST00000566126 ZMAT2Q96NC0 199 aaKnown RBP18.21■□□□□ 0.51
CLK3-217ENST00000566126 CCDC113Q9H0I3 377 aa18.21■□□□□ 0.51
CLK3-217ENST00000566126 CAPN10Q9HC96 672 aa18.21■□□□□ 0.51
CLK3-217ENST00000566126 ANKEF1Q9NU02 776 aa18.21■□□□□ 0.51
CLK3-217ENST00000566126 PCDHA4Q9UN74 947 aa18.21■□□□□ 0.51
CLK3-217ENST00000566126 SLC6A14Q9UN76 642 aa18.21■□□□□ 0.51
CLK3-217ENST00000566126 SLC27A5Q9Y2P5 690 aa18.21■□□□□ 0.51
CLK3-217ENST00000566126 ASB3Q9Y575 518 aa18.21■□□□□ 0.51
CLK3-217ENST00000566126 NUB1Q9Y5A7 615 aa18.21■□□□□ 0.51
CLK3-217ENST00000566126 J3QKU1 62 aa18.2■□□□□ 0.5
CLK3-217ENST00000566126 ACKR2O00590 384 aa18.2■□□□□ 0.5
CLK3-217ENST00000566126 SOAT2O75908 522 aa18.2■□□□□ 0.5
CLK3-217ENST00000566126 LYPLA2O95372 231 aa18.2■□□□□ 0.5
CLK3-217ENST00000566126 FGF19O95750 216 aa18.2■□□□□ 0.5
CLK3-217ENST00000566126 ITPKAP23677 461 aa18.2■□□□□ 0.5
CLK3-217ENST00000566126 ALDH1A3P47895 512 aa18.2■□□□□ 0.5
CLK3-217ENST00000566126 INF2Q27J81 1249 aa18.2■□□□□ 0.5
CLK3-217ENST00000566126 MAEAQ7L5Y9 396 aa18.2■□□□□ 0.5
CLK3-217ENST00000566126 SLCO6A1Q86UG4 719 aa18.2■□□□□ 0.5
CLK3-217ENST00000566126 APPL2Q8NEU8 664 aa18.2■□□□□ 0.5
CLK3-217ENST00000566126 RNF26Q9BY78 433 aaPredicted RBP18.2■□□□□ 0.5
CLK3-217ENST00000566126 IL21Q9HBE4 155 aa18.2■□□□□ 0.5
CLK3-217ENST00000566126 SH3GLB2Q9NR46 395 aa18.2■□□□□ 0.5
CLK3-217ENST00000566126 HELZP42694 1942 aaKnown RBP18.19■□□□□ 0.5
CLK3-217ENST00000566126 NID2Q14112 1375 aa18.19■□□□□ 0.5
CLK3-217ENST00000566126 HNRNPLP14866 589 aaKnown RBP eCLIP18.19■□□□□ 0.5
CLK3-217ENST00000566126 AKAP17AQ02040 695 aaKnown RBP18.19■□□□□ 0.5
CLK3-217ENST00000566126 GFPT1Q06210 699 aaPredicted RBP18.19■□□□□ 0.5
CLK3-217ENST00000566126 CYP4F3Q08477 520 aa18.19■□□□□ 0.5
CLK3-217ENST00000566126 NPY5RQ15761 445 aa18.19■□□□□ 0.5
CLK3-217ENST00000566126 LYSMD4Q5XG99 296 aa18.19■□□□□ 0.5
CLK3-217ENST00000566126 CENPPQ6IPU0 288 aa18.19■□□□□ 0.5
CLK3-217ENST00000566126 TOGARAM2Q6ZUX3 1019 aa18.19■□□□□ 0.5
CLK3-217ENST00000566126 TTC9BQ8N6N2 239 aa18.19■□□□□ 0.5
CLK3-217ENST00000566126 CEP120Q8N960 986 aa18.19■□□□□ 0.5
CLK3-217ENST00000566126 USP33Q8TEY7 942 aa18.19■□□□□ 0.5
CLK3-217ENST00000566126 CD101Q93033 1021 aa18.19■□□□□ 0.5
CLK3-217ENST00000566126 TBC1D32Q96NH3 1257 aa18.19■□□□□ 0.5
CLK3-217ENST00000566126 SLC26A6Q9BXS9 759 aa18.19■□□□□ 0.5
CLK3-217ENST00000566126 DNAAF2Q9NVR5 837 aaKnown RBP18.19■□□□□ 0.5
CLK3-217ENST00000566126 GOLGA4Q13439 2230 aaKnown RBP18.19■□□□□ 0.5
CLK3-217ENST00000566126 CITO14578 2027 aa18.18■□□□□ 0.5
CLK3-217ENST00000566126 USO1O60763 962 aaKnown RBP18.18■□□□□ 0.5
CLK3-217ENST00000566126 SERPINF2P08697 491 aa18.18■□□□□ 0.5
CLK3-217ENST00000566126 LIG1P18858 919 aa18.18■□□□□ 0.5
CLK3-217ENST00000566126 MCM4P33991 863 aa18.18■□□□□ 0.5
CLK3-217ENST00000566126 HOXD12P35452 270 aa18.18■□□□□ 0.5
CLK3-217ENST00000566126 DPP6P42658 865 aa18.18■□□□□ 0.5
CLK3-217ENST00000566126 GPR17Q13304 367 aa18.18■□□□□ 0.5
CLK3-217ENST00000566126 DUOXA1Q1HG43 343 aa18.18■□□□□ 0.5
CLK3-217ENST00000566126 ADCK5Q3MIX3 580 aa18.18■□□□□ 0.5
CLK3-217ENST00000566126 CMTM8Q8IZV2 173 aa18.18■□□□□ 0.5
CLK3-217ENST00000566126 BSNDQ8WZ55 320 aa18.18■□□□□ 0.5
CLK3-217ENST00000566126 USP13Q92995 863 aaPredicted RBP18.18■□□□□ 0.5
CLK3-217ENST00000566126 C18orf25Q96B23 403 aaPredicted RBP18.18■□□□□ 0.5
CLK3-217ENST00000566126 POLMQ9NP87 494 aaPredicted RBP18.18■□□□□ 0.5
CLK3-217ENST00000566126 SLC38A7Q9NVC3 462 aa18.18■□□□□ 0.5
CLK3-217ENST00000566126 PCDHB8Q9UN66 801 aa18.18■□□□□ 0.5
CLK3-217ENST00000566126 PCDHB9Q9Y5E1 797 aa18.18■□□□□ 0.5
CLK3-217ENST00000566126 OBSL1O75147 1896 aa18.18■□□□□ 0.5
CLK3-217ENST00000566126 ATMQ13315 3056 aa18.17■□□□□ 0.5
CLK3-217ENST00000566126 A0A087WWV3 80 aa18.17■□□□□ 0.5
CLK3-217ENST00000566126 MAP3K13O43283 966 aa18.17■□□□□ 0.5
CLK3-217ENST00000566126 GJB3O75712 270 aa18.17■□□□□ 0.5
CLK3-217ENST00000566126 OAZ2O95190 189 aa18.17■□□□□ 0.5
CLK3-217ENST00000566126 RPL9P32969 192 aaKnown RBP18.17■□□□□ 0.5
CLK3-217ENST00000566126 ABCG1P45844 678 aa18.17■□□□□ 0.5
CLK3-217ENST00000566126 CRY1Q16526 586 aa18.17■□□□□ 0.5
CLK3-217ENST00000566126 SPDYCQ5MJ68 293 aa18.17■□□□□ 0.5
CLK3-217ENST00000566126 NT5DC1Q5TFE4 455 aa18.17■□□□□ 0.5
CLK3-217ENST00000566126 PPP4R3AQ6IN85 833 aa18.17■□□□□ 0.5
CLK3-217ENST00000566126 TMPRSS7Q7RTY8 843 aa18.17■□□□□ 0.5
CLK3-217ENST00000566126 MARCH9Q86YJ5 346 aa18.17■□□□□ 0.5
CLK3-217ENST00000566126 BLIDQ8IZY5 108 aa18.17■□□□□ 0.5
CLK3-217ENST00000566126 ATAD1Q8NBU5 361 aa18.17■□□□□ 0.5
CLK3-217ENST00000566126 CEP76Q8TAP6 659 aa18.17■□□□□ 0.5
CLK3-217ENST00000566126 PIP4K2CQ8TBX8 421 aa18.17■□□□□ 0.5
CLK3-217ENST00000566126 HNRNPABQ99729 332 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms