RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 AJAP1Q9UKB5 411 aaPredicted RBP10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 NDUFAB1O14561 156 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 MEFVO15553 781 aaPredicted RBP10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 PQBP1O60828 265 aaKnown RBP10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 ZNF623O75123 536 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 CST3P01034 146 aaPredicted RBP10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 COL6A1P12109 1028 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 ITGA4P13612 1032 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 CXCR5P32302 372 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 MYL6P60660 151 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 NOP14P78316 857 aaKnown RBP10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 RBP5P82980 135 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 ZBTB6Q15916 424 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 ASTE1Q2TB18 679 aaPredicted RBP10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 TDRD12Q587J7 1177 aaKnown RBP10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 MRPL10Q7Z7H8 261 aaKnown RBP10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 VPS36Q86VN1 386 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 C1orf127Q8N9H9 656 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 BEST2Q8NFU1 509 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 SHC3Q92529 594 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 TATDN2Q93075 761 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 ARL8AQ96BM9 186 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 PGBD4Q96DM1 585 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 ZIM3Q96PE6 472 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 PSMB7Q99436 277 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 PI4K2AQ9BTU6 479 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 APOL6Q9BWW8 343 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 FTHL17Q9BXU8 183 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 UBN1Q9NPG3 1134 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 DPP3Q9NY33 737 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 HES2Q9Y543 173 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 CENPFP49454 3210 aa10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 A0A0U1RQF3 1178 aa10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 SRRM3A6NNA2 597 aaPredicted RBP10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 FOXN3O00409 490 aaPredicted RBP10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 NCK2O43639 380 aa10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 LRRN2O75325 713 aa10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 GFPT2O94808 682 aa10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 HEXIM1O94992 359 aaKnown RBP10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 STAU1O95793 577 aaKnown RBP10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 KRT19P08727 400 aa10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 P4HA1P13674 534 aa10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 AKAP5P24588 427 aa10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 ATN1P54259 1190 aaPredicted RBP10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 YWHAEP62258 255 aaKnown RBP10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 ARID5AQ03989 594 aa10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 PDCLQ13371 301 aa10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 SKIDA1Q1XH10 827 aa10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 ZNF699Q32M78 642 aa10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 HGSNATQ68CP4 663 aa10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 FAM71AQ8IYT1 594 aa10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 FAM84AQ96KN4 292 aa10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 KREMEN1Q96MU8 473 aa10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 ADAM2Q99965 735 aa10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 GPR88Q9GZN0 384 aa10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 VRTNQ9H8Y1 702 aa10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 SMARCAL1Q9NZC9 954 aa10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 UBQLN1Q9UMX0 589 aaKnown RBP10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 GIT1Q9Y2X7 761 aa10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 CEP350Q5VT06 3117 aa10.03□□□□□ -0.8
CNEP1R1-206ENST00000565556 SMIM28A0A1B0GU29 152 aa10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 HMGB1P1B2RPK0 211 aaPredicted RBP10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 CES2O00748 559 aa10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 EVI5O60447 810 aa10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 ITGB3P05106 788 aa10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 CYP3A5P20815 502 aa10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 NAP1L1P55209 391 aaKnown RBP10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 BPIFB4P59827 614 aa10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 TNNC1P63316 161 aa10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 GFPT1Q06210 699 aaPredicted RBP10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 MYO1EQ12965 1108 aa10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 CUL2Q13617 745 aa10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 ZNF667Q5HYK9 610 aa10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 SWT1Q5T5J6 900 aaKnown RBP10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 EMC10Q5UCC4 262 aa10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 CNPY4Q8N129 248 aa10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 EIF1ADQ8N9N8 165 aaKnown RBP10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 NIF3L1Q9GZT8 377 aa10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 XYLT2Q9H1B5 865 aa10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 FAM124BQ9H5Z6 455 aaPredicted RBP10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 C11orf49Q9H6J7 331 aa10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 APOBEC3GQ9HC16 384 aaKnown RBP10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 RGS18Q9NS28 235 aa10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 SLC38A7Q9NVC3 462 aa10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 EHD2Q9NZN4 543 aa10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 SIX4Q9UIU6 781 aa10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 NUB1Q9Y5A7 615 aa10.02□□□□□ -0.8
CNEP1R1-206ENST00000565556 BUB1O43683 1085 aa10.02□□□□□ -0.81
CNEP1R1-206ENST00000565556 MGEA5O60502 916 aa10.02□□□□□ -0.81
CNEP1R1-206ENST00000565556 EOMESO95936 686 aa10.02□□□□□ -0.81
CNEP1R1-206ENST00000565556 ATF7P17544 494 aaPredicted RBP10.02□□□□□ -0.81
CNEP1R1-206ENST00000565556 NR1D1P20393 614 aa10.02□□□□□ -0.81
CNEP1R1-206ENST00000565556 POLR2BP30876 1174 aaKnown RBP10.02□□□□□ -0.81
CNEP1R1-206ENST00000565556 GUCY2DQ02846 1103 aa10.02□□□□□ -0.81
CNEP1R1-206ENST00000565556 TLE2Q04725 743 aa10.02□□□□□ -0.81
CNEP1R1-206ENST00000565556 PTK2Q05397 1052 aa10.02□□□□□ -0.81
CNEP1R1-206ENST00000565556 FAAP100Q0VG06 881 aa10.02□□□□□ -0.81
CNEP1R1-206ENST00000565556 MBTPS1Q14703 1052 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms