RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 POU2F2P09086 479 aa11.02□□□□□ -0.65
SNX29-202ENST00000563308 HOXA9P31269 272 aa11.02□□□□□ -0.65
SNX29-202ENST00000563308 ZNF131P52739 623 aa11.02□□□□□ -0.65
SNX29-202ENST00000563308 YARSP54577 528 aaKnown RBP11.02□□□□□ -0.65
SNX29-202ENST00000563308 NCKAP1LP55160 1127 aa11.02□□□□□ -0.65
SNX29-202ENST00000563308 MCL1Q07820 350 aa11.02□□□□□ -0.65
SNX29-202ENST00000563308 LMAN2Q12907 356 aa11.02□□□□□ -0.65
SNX29-202ENST00000563308 HNRNPDQ14103 355 aaKnown RBP11.02□□□□□ -0.65
SNX29-202ENST00000563308 MRPL58Q14197 206 aaKnown RBP11.02□□□□□ -0.65
SNX29-202ENST00000563308 AXDND1Q5T1B0 1012 aaPredicted RBP11.02□□□□□ -0.65
SNX29-202ENST00000563308 PDXDC1Q6P996 788 aa11.02□□□□□ -0.65
SNX29-202ENST00000563308 C1orf228Q6PIY5 440 aa11.02□□□□□ -0.65
SNX29-202ENST00000563308 ZPBP2Q6X784 338 aa11.02□□□□□ -0.65
SNX29-202ENST00000563308 PIP4K2CQ8TBX8 421 aa11.02□□□□□ -0.65
SNX29-202ENST00000563308 AK8Q96MA6 479 aa11.02□□□□□ -0.65
SNX29-202ENST00000563308 ACAP3Q96P50 834 aa11.02□□□□□ -0.65
SNX29-202ENST00000563308 FIZ1Q96SL8 496 aa11.02□□□□□ -0.65
SNX29-202ENST00000563308 REEP2Q9BRK0 252 aa11.02□□□□□ -0.65
SNX29-202ENST00000563308 TCHPQ9BT92 498 aa11.02□□□□□ -0.65
SNX29-202ENST00000563308 UPF2Q9HAU5 1272 aaKnown RBP11.02□□□□□ -0.65
SNX29-202ENST00000563308 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.02□□□□□ -0.65
SNX29-202ENST00000563308 CDY1Q9Y6F8 540 aa11.02□□□□□ -0.65
SNX29-202ENST00000563308 PIAS3Q9Y6X2 628 aa11.02□□□□□ -0.65
SNX29-202ENST00000563308 LAMA5O15230 3695 aa11.02□□□□□ -0.65
SNX29-202ENST00000563308 DOCK6Q96HP0 2047 aa11.02□□□□□ -0.65
SNX29-202ENST00000563308 URB1O60287 2271 aaKnown RBP11.02□□□□□ -0.65
SNX29-202ENST00000563308 MYO9AB2RTY4 2548 aa11.02□□□□□ -0.65
SNX29-202ENST00000563308 TRIP11Q15643 1979 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 CCDC163A0A0D9SF12 145 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 CCL16O15467 120 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 FAM189A1O60320 539 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 XYLBO75191 536 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 CHRNB1P11230 501 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 HARSP12081 509 aaKnown RBP11.01□□□□□ -0.65
SNX29-202ENST00000563308 PLCG1P19174 1290 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 RPL9P32969 192 aaKnown RBP11.01□□□□□ -0.65
SNX29-202ENST00000563308 SMTNP53814 917 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 NOLC1Q14978 699 aaKnown RBP eCLIP11.01□□□□□ -0.65
SNX29-202ENST00000563308 KARSQ15046 597 aaKnown RBP11.01□□□□□ -0.65
SNX29-202ENST00000563308 PTPAQ15257 358 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 SF3A1Q15459 793 aaKnown RBP11.01□□□□□ -0.65
SNX29-202ENST00000563308 ZBTB6Q15916 424 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 DGKKQ5KSL6 1271 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 PPM1LQ5SGD2 360 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 LIN9Q5TKA1 542 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 SLC8B1Q6J4K2 584 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 POTEHQ6S545 545 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 USP49Q70CQ1 688 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 HAUS6Q7Z4H7 955 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 BRAPQ7Z569 592 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 RAB44Q7Z6P3 723 aaPredicted RBP11.01□□□□□ -0.65
SNX29-202ENST00000563308 GPBP1Q86WP2 473 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 SCUBE3Q8IX30 993 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 HDDC3Q8N4P3 179 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 FAM181AQ8N9Y4 354 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 ITFG1Q8TB96 612 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 SLC7A14Q8TBB6 771 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 CRELD1Q96HD1 420 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 DCBLD2Q96PD2 775 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 SLC38A7Q9NVC3 462 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 HCFC1R1Q9NWW0 138 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 KCNK4Q9NYG8 393 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 KCNG1Q9UIX4 513 aa11.01□□□□□ -0.65
SNX29-202ENST00000563308 TTC26A0AVF1 554 aa11□□□□□ -0.65
SNX29-202ENST00000563308 BCLAF3A2AJT9 711 aaKnown RBP11□□□□□ -0.65
SNX29-202ENST00000563308 TRAPPC3O43617 180 aa11□□□□□ -0.65
SNX29-202ENST00000563308 ABLIM3O94929 683 aa11□□□□□ -0.65
SNX29-202ENST00000563308 PIGRP01833 764 aa11□□□□□ -0.65
SNX29-202ENST00000563308 CXCL8P10145 99 aa11□□□□□ -0.65
SNX29-202ENST00000563308 LONP1P36776 959 aaKnown RBP11□□□□□ -0.65
SNX29-202ENST00000563308 UBA7P41226 1012 aa11□□□□□ -0.65
SNX29-202ENST00000563308 ATXN3P54252 364 aaPredicted RBP11□□□□□ -0.65
SNX29-202ENST00000563308 ROR1Q01973 937 aa11□□□□□ -0.65
SNX29-202ENST00000563308 STRN3Q13033 797 aa11□□□□□ -0.65
SNX29-202ENST00000563308 MCM6Q14566 821 aa11□□□□□ -0.65
SNX29-202ENST00000563308 UVSSAQ2YD98 709 aa11□□□□□ -0.65
SNX29-202ENST00000563308 TAF1BQ53T94 588 aaPredicted RBP11□□□□□ -0.65
SNX29-202ENST00000563308 SLC39A4Q6P5W5 647 aa11□□□□□ -0.65
SNX29-202ENST00000563308 LRRC69Q6ZNQ3 347 aa11□□□□□ -0.65
SNX29-202ENST00000563308 ANKS3Q6ZW76 656 aa11□□□□□ -0.65
SNX29-202ENST00000563308 ZNF461Q8TAF7 563 aa11□□□□□ -0.65
SNX29-202ENST00000563308 RAD54LQ92698 747 aa11□□□□□ -0.65
SNX29-202ENST00000563308 CDK5RAP3Q96JB5 506 aa11□□□□□ -0.65
SNX29-202ENST00000563308 SUSD3Q96L08 255 aa11□□□□□ -0.65
SNX29-202ENST00000563308 TRMT61BQ9BVS5 477 aaKnown RBP11□□□□□ -0.65
SNX29-202ENST00000563308 LARSQ9P2J5 1176 aaKnown RBP11□□□□□ -0.65
SNX29-202ENST00000563308 DNMT3BQ9UBC3 853 aaKnown RBP11□□□□□ -0.65
SNX29-202ENST00000563308 TUBGCP4Q9UGJ1 667 aa11□□□□□ -0.65
SNX29-202ENST00000563308 ODF2LQ9ULJ1 636 aa11□□□□□ -0.65
SNX29-202ENST00000563308 TBX20Q9UMR3 447 aa11□□□□□ -0.65
SNX29-202ENST00000563308 SLC8A2Q9UPR5 921 aa11□□□□□ -0.65
SNX29-202ENST00000563308 PCDHB9Q9Y5E1 797 aa11□□□□□ -0.65
SNX29-202ENST00000563308 CLIC4Q9Y696 253 aa11□□□□□ -0.65
SNX29-202ENST00000563308 NOTCH4Q99466 2003 aa11□□□□□ -0.65
SNX29-202ENST00000563308 A0A087WV48 116 aa10.99□□□□□ -0.65
SNX29-202ENST00000563308 ARHGEF37A1IGU5 675 aa10.99□□□□□ -0.65
SNX29-202ENST00000563308 WDR27A2RRH5 827 aa10.99□□□□□ -0.65
SNX29-202ENST00000563308 CDX4O14627 284 aaPredicted RBP10.99□□□□□ -0.65
SNX29-202ENST00000563308 SYN3O14994 580 aa10.99□□□□□ -0.65
SNX29-202ENST00000563308 CLDN3O15551 220 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms