RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 TCF4P15884 667 aa20.28■□□□□ 0.84
SMPD3-203ENST00000563226 COILP38432 576 aaPredicted RBP20.28■□□□□ 0.84
SMPD3-203ENST00000563226 OGDHQ02218 1023 aa20.28■□□□□ 0.84
SMPD3-203ENST00000563226 C17orf99Q6UX52 265 aa20.28■□□□□ 0.84
SMPD3-203ENST00000563226 SLC4A11Q8NBS3 891 aa20.28■□□□□ 0.84
SMPD3-203ENST00000563226 EXOC4Q96A65 974 aa20.28■□□□□ 0.84
SMPD3-203ENST00000563226 MCEEQ96PE7 176 aa20.28■□□□□ 0.84
SMPD3-203ENST00000563226 ADPGKQ9BRR6 497 aa20.28■□□□□ 0.84
SMPD3-203ENST00000563226 MTUS1Q9ULD2 1270 aa20.28■□□□□ 0.84
SMPD3-203ENST00000563226 SNX24Q9Y343 169 aa20.28■□□□□ 0.84
SMPD3-203ENST00000563226 TMEM191CA6NGB0 347 aa20.28■□□□□ 0.84
SMPD3-203ENST00000563226 MANSC4A6NHS7 340 aaPredicted RBP20.28■□□□□ 0.84
SMPD3-203ENST00000563226 KRT14P02533 472 aa20.28■□□□□ 0.84
SMPD3-203ENST00000563226 GJC1P36383 396 aa20.28■□□□□ 0.84
SMPD3-203ENST00000563226 HSD17B3P37058 310 aa20.28■□□□□ 0.84
SMPD3-203ENST00000563226 GRM5P41594 1212 aa20.28■□□□□ 0.84
SMPD3-203ENST00000563226 BEX3Q00994 111 aa20.28■□□□□ 0.84
SMPD3-203ENST00000563226 MFSD10Q14728 455 aa20.28■□□□□ 0.84
SMPD3-203ENST00000563226 PTPN20Q4JDL3 420 aa20.28■□□□□ 0.84
SMPD3-203ENST00000563226 TTMPQ5BVD1 217 aa20.28■□□□□ 0.84
SMPD3-203ENST00000563226 ANKS1BQ7Z6G8 1248 aa20.28■□□□□ 0.84
SMPD3-203ENST00000563226 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.28■□□□□ 0.84
SMPD3-203ENST00000563226 C1orf54Q8WWF1 131 aa20.28■□□□□ 0.84
SMPD3-203ENST00000563226 HPDLQ96IR7 371 aa20.28■□□□□ 0.84
SMPD3-203ENST00000563226 EIF2AQ9BY44 585 aaKnown RBP20.28■□□□□ 0.84
SMPD3-203ENST00000563226 SCN1AP35498 2009 aa20.28■□□□□ 0.84
SMPD3-203ENST00000563226 NRCAMQ92823 1304 aa20.27■□□□□ 0.84
SMPD3-203ENST00000563226 MBLAC1A4D2B0 266 aaPredicted RBP20.27■□□□□ 0.84
SMPD3-203ENST00000563226 CYP2C9P11712 490 aa20.27■□□□□ 0.84
SMPD3-203ENST00000563226 EIF4BP23588 611 aaKnown RBP20.27■□□□□ 0.84
SMPD3-203ENST00000563226 ZNF200P98182 395 aaPredicted RBP20.27■□□□□ 0.84
SMPD3-203ENST00000563226 KYAT1Q16773 422 aa20.27■□□□□ 0.84
SMPD3-203ENST00000563226 DNAJC24Q6P3W2 148 aa20.27■□□□□ 0.84
SMPD3-203ENST00000563226 C12orf50Q8NA57 414 aaPredicted RBP20.27■□□□□ 0.84
SMPD3-203ENST00000563226 KIF12Q96FN5 646 aa20.27■□□□□ 0.84
SMPD3-203ENST00000563226 RUFY1Q96T51 708 aa20.27■□□□□ 0.84
SMPD3-203ENST00000563226 ZNF518BQ9C0D4 1074 aa20.27■□□□□ 0.84
SMPD3-203ENST00000563226 VRTNQ9H8Y1 702 aa20.27■□□□□ 0.84
SMPD3-203ENST00000563226 ZDHHC18Q9NUE0 388 aa20.27■□□□□ 0.84
SMPD3-203ENST00000563226 DPP3Q9NY33 737 aa20.27■□□□□ 0.84
SMPD3-203ENST00000563226 SNTG2Q9NY99 539 aa20.27■□□□□ 0.84
SMPD3-203ENST00000563226 PTPN22Q9Y2R2 807 aa20.27■□□□□ 0.84
SMPD3-203ENST00000563226 C2CD2Q9Y426 696 aa20.27■□□□□ 0.84
SMPD3-203ENST00000563226 PSTPIP1O43586 416 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 CILPO75339 1184 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 ATICP31939 592 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 SSR1P43307 286 aaKnown RBP20.26■□□□□ 0.83
SMPD3-203ENST00000563226 PPP1R15BQ5SWA1 713 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 ZDHHC24Q6UX98 284 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 CATSPER4Q7RTX7 472 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 ERICH1Q86X53 443 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 RHOT1Q8IXI2 618 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 ATG4AQ8WYN0 398 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 GCOM2Q9BZD3 368 aaPredicted RBP20.26■□□□□ 0.83
SMPD3-203ENST00000563226 KLHL11Q9NVR0 708 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 HES2Q9Y543 173 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 MAN1A1P33908 653 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 LMAN1P49257 510 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 PSEN2P49810 448 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 ATP13A4Q4VNC1 1196 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 TMC3Q7Z5M5 1100 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 IFNL1Q8IU54 200 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 CCDC105Q8IYK2 499 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 DNAJB3Q8WWF6 145 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 ZMAT2Q96NC0 199 aaKnown RBP20.26■□□□□ 0.83
SMPD3-203ENST00000563226 PLVAPQ9BX97 442 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 CHST7Q9NS84 486 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 RNF19AQ9NV58 838 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 GRHL1Q9NZI5 618 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 IP6K2Q9UHH9 426 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 RASAL2Q9UJF2 1139 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 ITGA11Q9UKX5 1188 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 PLAAQ9Y263 795 aa20.26■□□□□ 0.83
SMPD3-203ENST00000563226 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.26■□□□□ 0.83
SMPD3-203ENST00000563226 SMIM35A0A1B0GVV1 85 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 OPA1O60313 960 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 MYL3P08590 195 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 PAEPP09466 180 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 RPL21P46778 160 aaKnown RBP20.25■□□□□ 0.83
SMPD3-203ENST00000563226 ADAM17P78536 824 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 PTPN11Q06124 597 aaPredicted RBP20.25■□□□□ 0.83
SMPD3-203ENST00000563226 SNX1Q13596 522 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 DCAF4L1Q3SXM0 396 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 SGO2Q562F6 1265 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 CHADLQ6NUI6 762 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 SAPCD2Q86UD0 394 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 CCDC50Q8IVM0 306 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 TMEM40Q8WWA1 233 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 HEMGNQ9BXL5 484 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 LRRC19Q9H756 370 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 GJD2Q9UKL4 321 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 R3HDM2Q9Y2K5 976 aaKnown RBP20.25■□□□□ 0.83
SMPD3-203ENST00000563226 CEP83Q9Y592 693 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 GOLGA6CA6NDK9 693 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 F8VP50 259 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 HAS3O00219 553 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 TREHO43280 583 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 GOLGA6DP0CG33 693 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 RALAP11233 206 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 RGMBQ6NW40 437 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms