RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 ITGB3P05106 788 aa17.85■□□□□ 0.45
CDT1-202ENST00000562747 ODC1P11926 461 aa17.85■□□□□ 0.45
CDT1-202ENST00000562747 DUOXA2Q1HG44 320 aa17.85■□□□□ 0.45
CDT1-202ENST00000562747 SV2CQ496J9 727 aa17.85■□□□□ 0.45
CDT1-202ENST00000562747 CTXN3Q4LDR2 81 aa17.85■□□□□ 0.45
CDT1-202ENST00000562747 COBLL1Q53SF7 1204 aa17.85■□□□□ 0.45
CDT1-202ENST00000562747 ZNF658Q5TYW1 1059 aaPredicted RBP17.85■□□□□ 0.45
CDT1-202ENST00000562747 RSPO2Q6UXX9 243 aaPredicted RBP17.85■□□□□ 0.45
CDT1-202ENST00000562747 CLEC17AQ6ZS10 378 aa17.85■□□□□ 0.45
CDT1-202ENST00000562747 USP37Q86T82 979 aa17.85■□□□□ 0.45
CDT1-202ENST00000562747 LRRC52Q8N7C0 313 aa17.85■□□□□ 0.45
CDT1-202ENST00000562747 GPR152Q8TDT2 470 aa17.85■□□□□ 0.45
CDT1-202ENST00000562747 DOCK6Q96HP0 2047 aa17.85■□□□□ 0.45
CDT1-202ENST00000562747 SENP8Q96LD8 212 aa17.85■□□□□ 0.45
CDT1-202ENST00000562747 FNBP1Q96RU3 617 aa17.85■□□□□ 0.45
CDT1-202ENST00000562747 MTMR12Q9C0I1 747 aa17.85■□□□□ 0.45
CDT1-202ENST00000562747 ZDHHC7Q9NXF8 308 aa17.85■□□□□ 0.45
CDT1-202ENST00000562747 DSEQ9UL01 958 aa17.85■□□□□ 0.45
CDT1-202ENST00000562747 SCN1AP35498 2009 aa17.84■□□□□ 0.45
CDT1-202ENST00000562747 WDR87Q6ZQQ6 2873 aa17.84■□□□□ 0.45
CDT1-202ENST00000562747 TNNC2P02585 160 aa17.84■□□□□ 0.45
CDT1-202ENST00000562747 SRFP11831 508 aa17.84■□□□□ 0.45
CDT1-202ENST00000562747 POLR2BP30876 1174 aaKnown RBP17.84■□□□□ 0.45
CDT1-202ENST00000562747 RBP5P82980 135 aa17.84■□□□□ 0.45
CDT1-202ENST00000562747 FOXK2Q01167 660 aa17.84■□□□□ 0.45
CDT1-202ENST00000562747 RTL10Q7L3V2 364 aa17.84■□□□□ 0.45
CDT1-202ENST00000562747 GET4Q7L5D6 327 aaPredicted RBP17.84■□□□□ 0.45
CDT1-202ENST00000562747 CSGALNACT2Q8N6G5 542 aa17.84■□□□□ 0.45
CDT1-202ENST00000562747 CXorf38Q8TB03 319 aa17.84■□□□□ 0.45
CDT1-202ENST00000562747 CGRRF1Q99675 332 aa17.84■□□□□ 0.45
CDT1-202ENST00000562747 FBXL5Q9UKA1 691 aa17.84■□□□□ 0.45
CDT1-202ENST00000562747 AGAP1Q9UPQ3 857 aa17.84■□□□□ 0.45
CDT1-202ENST00000562747 MAPK8IP1Q9UQF2 711 aa17.84■□□□□ 0.45
CDT1-202ENST00000562747 R4GN57 208 aa17.84■□□□□ 0.45
CDT1-202ENST00000562747 CACNA1AO00555 2505 aa17.84■□□□□ 0.45
CDT1-202ENST00000562747 FANCMQ8IYD8 2048 aa17.83■□□□□ 0.45
CDT1-202ENST00000562747 PTPRJQ12913 1337 aa17.83■□□□□ 0.44
CDT1-202ENST00000562747 KPNA7A9QM74 516 aa17.83■□□□□ 0.44
CDT1-202ENST00000562747 ZMYND10O75800 440 aa17.83■□□□□ 0.44
CDT1-202ENST00000562747 CYP11A1P05108 521 aa17.83■□□□□ 0.44
CDT1-202ENST00000562747 DLATP10515 647 aaKnown RBP17.83■□□□□ 0.44
CDT1-202ENST00000562747 LAMP2P13473 410 aa17.83■□□□□ 0.44
CDT1-202ENST00000562747 TNNI1P19237 187 aa17.83■□□□□ 0.44
CDT1-202ENST00000562747 ID4P47928 161 aa17.83■□□□□ 0.44
CDT1-202ENST00000562747 ROR1Q01973 937 aa17.83■□□□□ 0.44
CDT1-202ENST00000562747 HTR4Q13639 388 aa17.83■□□□□ 0.44
CDT1-202ENST00000562747 UVSSAQ2YD98 709 aa17.83■□□□□ 0.44
CDT1-202ENST00000562747 LIN9Q5TKA1 542 aa17.83■□□□□ 0.44
CDT1-202ENST00000562747 LMBRD2Q68DH5 695 aaPredicted RBP17.83■□□□□ 0.44
CDT1-202ENST00000562747 OVOS1Q6IE37 1185 aa17.83■□□□□ 0.44
CDT1-202ENST00000562747 OR5B17Q8NGF7 314 aa17.83■□□□□ 0.44
CDT1-202ENST00000562747 ZNF461Q8TAF7 563 aa17.83■□□□□ 0.44
CDT1-202ENST00000562747 BORCS6Q96GS4 357 aa17.83■□□□□ 0.44
CDT1-202ENST00000562747 DLGAP2Q9P1A6 1054 aa17.83■□□□□ 0.44
CDT1-202ENST00000562747 SIX4Q9UIU6 781 aa17.83■□□□□ 0.44
CDT1-202ENST00000562747 R3HCC1Q9Y3T6 440 aaKnown RBP17.83■□□□□ 0.44
CDT1-202ENST00000562747 TIMM13Q9Y5L4 95 aaPredicted RBP17.83■□□□□ 0.44
CDT1-202ENST00000562747 DNAH14Q0VDD8 3507 aa17.82■□□□□ 0.44
CDT1-202ENST00000562747 WDR27A2RRH5 827 aa17.82■□□□□ 0.44
CDT1-202ENST00000562747 OR6C75A6NL08 312 aa17.82■□□□□ 0.44
CDT1-202ENST00000562747 ANHXE9PGG2 379 aa17.82■□□□□ 0.44
CDT1-202ENST00000562747 STK25O00506 426 aa17.82■□□□□ 0.44
CDT1-202ENST00000562747 CYB561D2O14569 222 aa17.82■□□□□ 0.44
CDT1-202ENST00000562747 MAPK13O15264 365 aa17.82■□□□□ 0.44
CDT1-202ENST00000562747 ABLIM3O94929 683 aa17.82■□□□□ 0.44
CDT1-202ENST00000562747 DCNP07585 359 aaKnown RBP17.82■□□□□ 0.44
CDT1-202ENST00000562747 KRT19P08727 400 aa17.82■□□□□ 0.44
CDT1-202ENST00000562747 RPL13P26373 211 aaKnown RBP17.82■□□□□ 0.44
CDT1-202ENST00000562747 HOXA9P31269 272 aa17.82■□□□□ 0.44
CDT1-202ENST00000562747 ZCWPW2Q504Y3 356 aa17.82■□□□□ 0.44
CDT1-202ENST00000562747 TPGS2Q68CL5 300 aa17.82■□□□□ 0.44
CDT1-202ENST00000562747 METTL23Q86XA0 190 aa17.82■□□□□ 0.44
CDT1-202ENST00000562747 SMYD4Q8IYR2 804 aaPredicted RBP17.82■□□□□ 0.44
CDT1-202ENST00000562747 ERCC4Q92889 916 aaPredicted RBP17.82■□□□□ 0.44
CDT1-202ENST00000562747 CCDC127Q96BQ5 260 aa17.82■□□□□ 0.44
CDT1-202ENST00000562747 PRKD2Q9BZL6 878 aa17.82■□□□□ 0.44
CDT1-202ENST00000562747 PIDD1Q9HB75 910 aa17.82■□□□□ 0.44
CDT1-202ENST00000562747 MAFFQ9ULX9 164 aa17.82■□□□□ 0.44
CDT1-202ENST00000562747 FRMD4BQ9Y2L6 1034 aa17.82■□□□□ 0.44
CDT1-202ENST00000562747 NUMBLQ9Y6R0 609 aa17.82■□□□□ 0.44
CDT1-202ENST00000562747 TSC2P49815 1807 aa17.82■□□□□ 0.44
CDT1-202ENST00000562747 DMXL1Q9Y485 3027 aa17.81■□□□□ 0.44
CDT1-202ENST00000562747 C8AP07357 584 aa17.81■□□□□ 0.44
CDT1-202ENST00000562747 HNRNPA1P09651 372 aaKnown RBP eCLIP17.81■□□□□ 0.44
CDT1-202ENST00000562747 ATF2P15336 505 aa17.81■□□□□ 0.44
CDT1-202ENST00000562747 NR2F2P24468 414 aa17.81■□□□□ 0.44
CDT1-202ENST00000562747 PRCPP42785 496 aa17.81■□□□□ 0.44
CDT1-202ENST00000562747 AP3M2P53677 418 aa17.81■□□□□ 0.44
CDT1-202ENST00000562747 ARPP19P56211 112 aa17.81■□□□□ 0.44
CDT1-202ENST00000562747 CLDN10P78369 228 aa17.81■□□□□ 0.44
CDT1-202ENST00000562747 MYO1EQ12965 1108 aa17.81■□□□□ 0.44
CDT1-202ENST00000562747 EDRF1Q3B7T1 1238 aa17.81■□□□□ 0.44
CDT1-202ENST00000562747 CEP135Q66GS9 1140 aa17.81■□□□□ 0.44
CDT1-202ENST00000562747 TRAPPC11Q7Z392 1133 aa17.81■□□□□ 0.44
CDT1-202ENST00000562747 PARD3BQ8TEW8 1205 aa17.81■□□□□ 0.44
CDT1-202ENST00000562747 FAM84AQ96KN4 292 aa17.81■□□□□ 0.44
CDT1-202ENST00000562747 RPP25Q9BUL9 199 aaKnown RBP17.81■□□□□ 0.44
CDT1-202ENST00000562747 GZF1Q9H116 711 aaPredicted RBP17.81■□□□□ 0.44
CDT1-202ENST00000562747 ARHGEF3Q9NR81 526 aa17.81■□□□□ 0.44
CDT1-202ENST00000562747 GDAP2Q9NXN4 497 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms