RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 AADACL2Q6P093 401 aa13.42□□□□□ -0.26
AC055717.2-201ENST00000561864 CATSPER4Q7RTX7 472 aa13.42□□□□□ -0.26
AC055717.2-201ENST00000561864 ERICH1Q86X53 443 aa13.42□□□□□ -0.26
AC055717.2-201ENST00000561864 CPNE8Q86YQ8 564 aa13.42□□□□□ -0.26
AC055717.2-201ENST00000561864 JAMLQ86YT9 394 aa13.42□□□□□ -0.26
AC055717.2-201ENST00000561864 TFAP2BQ92481 460 aa13.42□□□□□ -0.26
AC055717.2-201ENST00000561864 SLCO2A1Q92959 643 aa13.42□□□□□ -0.26
AC055717.2-201ENST00000561864 MAGOHBQ96A72 148 aaKnown RBP13.42□□□□□ -0.26
AC055717.2-201ENST00000561864 DDX27Q96GQ7 796 aaKnown RBP13.42□□□□□ -0.26
AC055717.2-201ENST00000561864 HPDLQ96IR7 371 aa13.42□□□□□ -0.26
AC055717.2-201ENST00000561864 PKNOX2Q96KN3 472 aa13.42□□□□□ -0.26
AC055717.2-201ENST00000561864 TSPAN18Q96SJ8 248 aa13.42□□□□□ -0.26
AC055717.2-201ENST00000561864 SH3GL2Q99962 352 aa13.42□□□□□ -0.26
AC055717.2-201ENST00000561864 ERP44Q9BS26 406 aa13.42□□□□□ -0.26
AC055717.2-201ENST00000561864 TRIM7Q9C029 511 aa13.42□□□□□ -0.26
AC055717.2-201ENST00000561864 FAM49AQ9H0Q0 323 aaPredicted RBP13.42□□□□□ -0.26
AC055717.2-201ENST00000561864 SDCBP2Q9H190 292 aa13.42□□□□□ -0.26
AC055717.2-201ENST00000561864 DPP3Q9NY33 737 aa13.42□□□□□ -0.26
AC055717.2-201ENST00000561864 PSD3Q9NYI0 1048 aa13.42□□□□□ -0.26
AC055717.2-201ENST00000561864 VPS18Q9P253 973 aa13.42□□□□□ -0.26
AC055717.2-201ENST00000561864 PARP2Q9UGN5 583 aa13.42□□□□□ -0.26
AC055717.2-201ENST00000561864 FAM153AQ9UHL3 310 aa13.42□□□□□ -0.26
AC055717.2-201ENST00000561864 FAN1Q9Y2M0 1017 aa13.42□□□□□ -0.26
AC055717.2-201ENST00000561864 TNPO2O14787 897 aaKnown RBP13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 DAPK3O43293 454 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 KPNA6O60684 536 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 CILPO75339 1184 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 NPTXRO95502 500 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 CD19P15391 556 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 COILP38432 576 aaPredicted RBP13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 GUCY2FP51841 1108 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 YARSP54577 528 aaKnown RBP13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 ADAM17P78536 824 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 HTRA3P83110 453 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 PTPN11Q06124 597 aaPredicted RBP13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 DMTNQ08495 405 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 WDR72Q3MJ13 1102 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 PPP1R15BQ5SWA1 713 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 PRAMEF19Q5SWL8 479 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 LRRC38Q5VT99 294 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 DENND1BQ6P3S1 775 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 LRIG3Q6UXM1 1119 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 SYDE1Q6ZW31 735 aaPredicted RBP13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 ADAT2Q7Z6V5 191 aaKnown RBP13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 SAPCD2Q86UD0 394 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 NIPA2Q8N8Q9 360 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 C3orf20Q8ND61 904 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 EXD1Q8NHP7 514 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 KIF12Q96FN5 646 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 TMEM176AQ96HP8 235 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 SNX27Q96L92 541 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 CELF4Q9BZC1 486 aaKnown RBP13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 PLEKHA4Q9H4M7 779 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 LRRC19Q9H756 370 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 SMYD3Q9H7B4 428 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 PRDM10Q9NQV6 1147 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 HOMER3Q9NSC5 361 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 WDR35Q9P2L0 1181 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 KIAA1257Q9ULG3 409 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 AGAP1Q9UPQ3 857 aa13.41□□□□□ -0.26
AC055717.2-201ENST00000561864 HMGCRP04035 888 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 MYL3P08590 195 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 RARAP10276 462 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 VDRP11473 427 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 GNAT1P11488 350 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 CYP2B6P20813 491 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 HOXA11P31270 313 aaPredicted RBP13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 HOXC8P31273 242 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 SSTR3P32745 418 aaPredicted RBP13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 CYP2C19P33261 490 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 CETN2P41208 172 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 RAP1GAPP47736 663 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 MYO1EQ12965 1108 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 PIGHQ14442 188 aaPredicted RBP13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 STILQ15468 1287 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 CCL14Q16627 93 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 ZNF394Q53GI3 561 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 C2CD6Q53TS8 623 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 LLGL2Q6P1M3 1020 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 CCDC137Q6PK04 289 aaKnown RBP13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 RUFY4Q6ZNE9 571 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 PHLDB2Q86SQ0 1253 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 NME8Q8N427 588 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 LRRC52Q8N7C0 313 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 SLC4A11Q8NBS3 891 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 C18orf8Q96DM3 657 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 RBM41Q96IZ5 413 aaKnown RBP13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 TRIM51Q9BSJ1 452 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 CREBZFQ9NS37 354 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 GJD2Q9UKL4 321 aa13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 ABT1Q9ULW3 272 aaKnown RBP13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 BARX2Q9UMQ3 279 aaPredicted RBP13.4□□□□□ -0.26
AC055717.2-201ENST00000561864 C17orf102A2RUQ5 167 aa13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 AKR1A1P14550 325 aa13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 CDH8P55286 799 aa13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 TRADDQ15628 312 aa13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 CNGA2Q16280 664 aa13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 FSCN1Q16658 493 aaKnown RBP13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 SGO2Q562F6 1265 aa13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 TTC27Q6P3X3 843 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms