RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 MRPL9Q9BYD2 267 aaKnown RBP10.98□□□□□ -0.65
USP3-219ENST00000561326 ZNF518BQ9C0D4 1074 aa10.98□□□□□ -0.65
USP3-219ENST00000561326 ISCUQ9H1K1 167 aa10.98□□□□□ -0.65
USP3-219ENST00000561326 SMYD3Q9H7B4 428 aa10.98□□□□□ -0.65
USP3-219ENST00000561326 GOLGA2P5Q9HBQ8 144 aa10.98□□□□□ -0.65
USP3-219ENST00000561326 ANKRD62A6NC57 917 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 BTNL10A8MVZ5 291 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 TMCO5BA8MYB1 307 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 PPEF2O14830 753 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 TRAPPC3O43617 180 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 B3GAT3O94766 335 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 LSM8O95777 96 aaKnown RBP10.97□□□□□ -0.65
USP3-219ENST00000561326 EN2P19622 333 aaPredicted RBP10.97□□□□□ -0.65
USP3-219ENST00000561326 RAP1GAPP47736 663 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 LHX1P48742 406 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 CLCNKBP51801 687 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 AFF1P51825 1210 aaKnown RBP10.97□□□□□ -0.65
USP3-219ENST00000561326 NDST1P52848 882 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 RAD23BP54727 409 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 GALCP54803 685 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 GPC5P78333 572 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 FMO1Q01740 532 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 CLEC16AQ2KHT3 1053 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 SOWAHAQ2M3V2 549 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 SGO2Q562F6 1265 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 ACAD10Q6JQN1 1059 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 MFSD5Q6N075 450 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 TMEM35BQ8NCS4 154 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 SPATA18Q8TC71 538 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 LINC01599Q8WXQ3 324 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 SECISBP2LQ93073 1101 aaKnown RBP10.97□□□□□ -0.65
USP3-219ENST00000561326 TRIM11Q96F44 468 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 TNIP3Q96KP6 325 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 SENP8Q96LD8 212 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 NOX5Q96PH1 765 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 LACRTQ9GZZ8 138 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 SDCBP2Q9H190 292 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 ACP6Q9NPH0 428 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 DSEQ9UL01 958 aa10.97□□□□□ -0.65
USP3-219ENST00000561326 A0A0A6YYK5 440 aaPredicted RBP10.96□□□□□ -0.65
USP3-219ENST00000561326 CASTOR2A6NHX0 329 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 A8MXQ7 604 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 AMHP03971 560 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 ALDH2P05091 517 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 TMEM253P0C7T8 217 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 MYBL1P10243 752 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 FGFR1P11362 822 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 ODC1P11926 461 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 CASQ1P31415 396 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 ARHGAP25P42331 645 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 NOP2P46087 812 aaKnown RBP10.96□□□□□ -0.65
USP3-219ENST00000561326 NSFP46459 744 aaKnown RBP10.96□□□□□ -0.65
USP3-219ENST00000561326 SNX16P57768 344 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 CNGA2Q16280 664 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 CLLU1OSQ5K130 101 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 ZNF569Q5MCW4 686 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 LIN9Q5TKA1 542 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.96□□□□□ -0.65
USP3-219ENST00000561326 LIMS2Q7Z4I7 341 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 RHOT2Q8IXI1 618 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 ADGRF2Q8IZF7 708 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 TMEM130Q8N3G9 435 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 SLC4A11Q8NBS3 891 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 MSANTD4Q8NCY6 345 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 TRIM58Q8NG06 486 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 WHAMMQ8TF30 809 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 ZNF592Q92610 1267 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 VCPIP1Q96JH7 1222 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 ALS2CR12Q96Q35 445 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 COLEC11Q9BWP8 271 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 LHX5Q9H2C1 402 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 RRAGDQ9NQL2 400 aaPredicted RBP10.96□□□□□ -0.65
USP3-219ENST00000561326 TBC1D13Q9NVG8 400 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 NENFQ9UMX5 172 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 PCDHGC3Q9UN70 934 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 PAXBP1Q9Y5B6 917 aa10.96□□□□□ -0.65
USP3-219ENST00000561326 LTBP2Q14767 1821 aa10.95□□□□□ -0.66
USP3-219ENST00000561326 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.95□□□□□ -0.66
USP3-219ENST00000561326 MACROD2A1Z1Q3 448 aa10.95□□□□□ -0.66
USP3-219ENST00000561326 CARNS1A5YM72 827 aa10.95□□□□□ -0.66
USP3-219ENST00000561326 TRIM43BA6NCK2 446 aa10.95□□□□□ -0.66
USP3-219ENST00000561326 RCCD1A6NED2 376 aa10.95□□□□□ -0.66
USP3-219ENST00000561326 SPTLC1O15269 473 aa10.95□□□□□ -0.66
USP3-219ENST00000561326 CAPN15O75808 1086 aa10.95□□□□□ -0.66
USP3-219ENST00000561326 CYP1A1P04798 512 aaPredicted RBP10.95□□□□□ -0.66
USP3-219ENST00000561326 UNGP13051 313 aaPredicted RBP10.95□□□□□ -0.66
USP3-219ENST00000561326 WARSP23381 471 aaKnown RBP10.95□□□□□ -0.66
USP3-219ENST00000561326 DSC1Q08554 894 aa10.95□□□□□ -0.66
USP3-219ENST00000561326 SYT10Q6XYQ8 523 aa10.95□□□□□ -0.66
USP3-219ENST00000561326 UBE2Q1Q7Z7E8 422 aa10.95□□□□□ -0.66
USP3-219ENST00000561326 CRYBG2Q8N1P7 616 aa10.95□□□□□ -0.66
USP3-219ENST00000561326 THEM5Q8N1Q8 247 aa10.95□□□□□ -0.66
USP3-219ENST00000561326 UBE2Q2Q8WVN8 375 aa10.95□□□□□ -0.66
USP3-219ENST00000561326 TRIM43Q96BQ3 446 aaPredicted RBP10.95□□□□□ -0.66
USP3-219ENST00000561326 CYFIP2Q96F07 1278 aa10.95□□□□□ -0.66
USP3-219ENST00000561326 CASD1Q96PB1 797 aa10.95□□□□□ -0.66
USP3-219ENST00000561326 PCDHB18PQ96TA0 734 aa10.95□□□□□ -0.66
USP3-219ENST00000561326 MRPL45Q9BRJ2 306 aaKnown RBP10.95□□□□□ -0.66
USP3-219ENST00000561326 ELOVL4Q9GZR5 314 aa10.95□□□□□ -0.66
USP3-219ENST00000561326 MIS12Q9H081 205 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms