RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 SNX19Q92543 992 aa4.49□□□□□ -1.69
USP8-216ENST00000561206 TMX3Q96JJ7 454 aa4.49□□□□□ -1.69
USP8-216ENST00000561206 JKAMPQ9P055 326 aa4.49□□□□□ -1.69
USP8-216ENST00000561206 NOTCH3Q9UM47 2321 aa4.48□□□□□ -1.69
USP8-216ENST00000561206 CCDC195A0A1B0GUA6 201 aa4.48□□□□□ -1.69
USP8-216ENST00000561206 TARM1B6A8C7 271 aa4.48□□□□□ -1.69
USP8-216ENST00000561206 TUBB4AP04350 444 aa4.48□□□□□ -1.69
USP8-216ENST00000561206 CHRM2P08172 466 aa4.48□□□□□ -1.69
USP8-216ENST00000561206 PPP3CBP16298 524 aa4.48□□□□□ -1.69
USP8-216ENST00000561206 CPEP16870 476 aa4.48□□□□□ -1.69
USP8-216ENST00000561206 MPGP29372 298 aa4.48□□□□□ -1.69
USP8-216ENST00000561206 MMP13P45452 471 aa4.48□□□□□ -1.69
USP8-216ENST00000561206 CDC42EP1Q00587 391 aa4.48□□□□□ -1.69
USP8-216ENST00000561206 FAM153CQ494X1 144 aa4.48□□□□□ -1.69
USP8-216ENST00000561206 PREPLQ4J6C6 727 aaPredicted RBP4.48□□□□□ -1.69
USP8-216ENST00000561206 UTP14CQ5TAP6 766 aaKnown RBP4.48□□□□□ -1.69
USP8-216ENST00000561206 ZNF365Q70YC5 407 aa4.48□□□□□ -1.69
USP8-216ENST00000561206 RASAL3Q86YV0 1011 aa4.48□□□□□ -1.69
USP8-216ENST00000561206 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.48□□□□□ -1.69
USP8-216ENST00000561206 IL17RDQ8NFM7 739 aa4.48□□□□□ -1.69
USP8-216ENST00000561206 IFI44Q8TCB0 444 aa4.48□□□□□ -1.69
USP8-216ENST00000561206 COG1Q8WTW3 980 aa4.48□□□□□ -1.69
USP8-216ENST00000561206 NRG4Q8WWG1 115 aa4.48□□□□□ -1.69
USP8-216ENST00000561206 RAB24Q969Q5 203 aa4.48□□□□□ -1.69
USP8-216ENST00000561206 PRSS22Q9GZN4 317 aa4.48□□□□□ -1.69
USP8-216ENST00000561206 SLKQ9H2G2 1235 aaPredicted RBP4.48□□□□□ -1.69
USP8-216ENST00000561206 TDP1Q9NUW8 608 aa4.48□□□□□ -1.69
USP8-216ENST00000561206 INTUQ9ULD6 942 aa4.48□□□□□ -1.69
USP8-216ENST00000561206 PCDHB1Q9Y5F3 818 aa4.48□□□□□ -1.69
USP8-216ENST00000561206 WASHC2AQ641Q2 1341 aa4.47□□□□□ -1.69
USP8-216ENST00000561206 TRIM75PA6NK02 468 aa4.47□□□□□ -1.69
USP8-216ENST00000561206 VWC2LB2RUY7 222 aa4.47□□□□□ -1.69
USP8-216ENST00000561206 TOR1BO14657 336 aa4.47□□□□□ -1.69
USP8-216ENST00000561206 MASP1P48740 699 aa4.47□□□□□ -1.69
USP8-216ENST00000561206 THBS3P49746 956 aa4.47□□□□□ -1.69
USP8-216ENST00000561206 PLCD1P51178 756 aa4.47□□□□□ -1.69
USP8-216ENST00000561206 NXPH1P58417 271 aa4.47□□□□□ -1.69
USP8-216ENST00000561206 ITIH3Q06033 890 aa4.47□□□□□ -1.69
USP8-216ENST00000561206 HLXQ14774 488 aaPredicted RBP4.47□□□□□ -1.69
USP8-216ENST00000561206 TWIST1Q15672 202 aa4.47□□□□□ -1.69
USP8-216ENST00000561206 TMEM119Q4V9L6 283 aa4.47□□□□□ -1.69
USP8-216ENST00000561206 FLYWCH1Q4VC44 716 aa4.47□□□□□ -1.69
USP8-216ENST00000561206 CEP78Q5JTW2 689 aa4.47□□□□□ -1.69
USP8-216ENST00000561206 MIGA2Q7L4E1 593 aa4.47□□□□□ -1.69
USP8-216ENST00000561206 RSPH3Q86UC2 560 aa4.47□□□□□ -1.69
USP8-216ENST00000561206 CFAP52Q8N1V2 620 aa4.47□□□□□ -1.69
USP8-216ENST00000561206 WDR66Q8TBY9 1149 aa4.47□□□□□ -1.69
USP8-216ENST00000561206 PACSIN1Q9BY11 444 aa4.47□□□□□ -1.69
USP8-216ENST00000561206 E7ENX8 843 aa4.46□□□□□ -1.7
USP8-216ENST00000561206 MYO1FO00160 1098 aa4.46□□□□□ -1.7
USP8-216ENST00000561206 SGTAO43765 313 aa4.46□□□□□ -1.7
USP8-216ENST00000561206 SLC43A1O75387 559 aa4.46□□□□□ -1.7
USP8-216ENST00000561206 URI1O94763 535 aaPredicted RBP4.46□□□□□ -1.7
USP8-216ENST00000561206 VIL1P09327 827 aaKnown RBP4.46□□□□□ -1.7
USP8-216ENST00000561206 POU6F2P78424 691 aaPredicted RBP4.46□□□□□ -1.7
USP8-216ENST00000561206 TAP2Q03519 686 aa4.46□□□□□ -1.7
USP8-216ENST00000561206 PIGFQ07326 219 aa4.46□□□□□ -1.7
USP8-216ENST00000561206 KLF1Q13351 362 aaPredicted RBP4.46□□□□□ -1.7
USP8-216ENST00000561206 SLC2A7Q6PXP3 512 aa4.46□□□□□ -1.7
USP8-216ENST00000561206 AMOTL1Q8IY63 956 aa4.46□□□□□ -1.7
USP8-216ENST00000561206 PPM1NQ8N819 430 aa4.46□□□□□ -1.7
USP8-216ENST00000561206 B3GALNT2Q8NCR0 500 aa4.46□□□□□ -1.7
USP8-216ENST00000561206 TMIEQ8NEW7 156 aa4.46□□□□□ -1.7
USP8-216ENST00000561206 NSMCE1Q8WV22 266 aa4.46□□□□□ -1.7
USP8-216ENST00000561206 LRIG1Q96JA1 1093 aa4.46□□□□□ -1.7
USP8-216ENST00000561206 PBKQ96KB5 322 aa4.46□□□□□ -1.7
USP8-216ENST00000561206 KLC4Q9NSK0 619 aa4.46□□□□□ -1.7
USP8-216ENST00000561206 SAP30BPQ9UHR5 308 aaKnown RBP4.46□□□□□ -1.7
USP8-216ENST00000561206 ADGRA2Q96PE1 1338 aa4.46□□□□□ -1.7
USP8-216ENST00000561206 HSD3B2P26439 372 aa4.45□□□□□ -1.7
USP8-216ENST00000561206 HNRNPMP52272 730 aaKnown RBP eCLIP4.45□□□□□ -1.7
USP8-216ENST00000561206 PXDC1Q5TGL8 231 aa4.45□□□□□ -1.7
USP8-216ENST00000561206 RNF219Q5W0B1 726 aaPredicted RBP4.45□□□□□ -1.7
USP8-216ENST00000561206 TAPT1Q6NXT6 567 aa4.45□□□□□ -1.7
USP8-216ENST00000561206 NSUN7Q8NE18 718 aaKnown RBP4.45□□□□□ -1.7
USP8-216ENST00000561206 TUBD1Q9UJT1 453 aa4.45□□□□□ -1.7
USP8-216ENST00000561206 SLC45A2Q9UMX9 530 aa4.45□□□□□ -1.7
USP8-216ENST00000561206 ST3GAL5Q9UNP4 418 aa4.45□□□□□ -1.7
USP8-216ENST00000561206 CYP2D7A0A087X1C5 515 aa4.44□□□□□ -1.7
USP8-216ENST00000561206 FAM90A10PA6NDY2 464 aa4.44□□□□□ -1.7
USP8-216ENST00000561206 TISP43B9A030 160 aa4.44□□□□□ -1.7
USP8-216ENST00000561206 DRD4P21917 467 aa4.44□□□□□ -1.7
USP8-216ENST00000561206 NPTX2P47972 431 aa4.44□□□□□ -1.7
USP8-216ENST00000561206 ZNF280AP59817 542 aaPredicted RBP4.44□□□□□ -1.7
USP8-216ENST00000561206 TLE1Q04724 770 aa4.44□□□□□ -1.7
USP8-216ENST00000561206 RAB39AQ14964 217 aa4.44□□□□□ -1.7
USP8-216ENST00000561206 KRT26Q7Z3Y9 468 aa4.44□□□□□ -1.7
USP8-216ENST00000561206 HDAC10Q969S8 669 aa4.44□□□□□ -1.7
USP8-216ENST00000561206 MRGPRX4Q96LA9 322 aa4.44□□□□□ -1.7
USP8-216ENST00000561206 IMPG2Q9BZV3 1241 aa4.44□□□□□ -1.7
USP8-216ENST00000561206 AFG3L2Q9Y4W6 797 aa4.44□□□□□ -1.7
USP8-216ENST00000561206 PCDHA13Q9Y5I0 950 aa4.44□□□□□ -1.7
USP8-216ENST00000561206 E9PLN8 166 aa4.43□□□□□ -1.7
USP8-216ENST00000561206 SOCS2O14508 198 aa4.43□□□□□ -1.7
USP8-216ENST00000561206 NDUFS2O75306 463 aa4.43□□□□□ -1.7
USP8-216ENST00000561206 TTLL1O95922 423 aa4.43□□□□□ -1.7
USP8-216ENST00000561206 ANXA1P04083 346 aa4.43□□□□□ -1.7
USP8-216ENST00000561206 RHOP08100 348 aa4.43□□□□□ -1.7
USP8-216ENST00000561206 ERV3-1Q14264 604 aa4.43□□□□□ -1.7
USP8-216ENST00000561206 RABEP1Q15276 862 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms