RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 PTPROQ16827 1216 aa14.77□□□□□ -0.04
RABGGTA-220ENST00000560998 DCAF12L1Q5VU92 463 aa14.77□□□□□ -0.04
RABGGTA-220ENST00000560998 SLC35G2Q8TBE7 412 aa14.77□□□□□ -0.04
RABGGTA-220ENST00000560998 SLC20A1Q8WUM9 679 aa14.77□□□□□ -0.04
RABGGTA-220ENST00000560998 CTNNBL1Q8WYA6 563 aaPredicted RBP14.77□□□□□ -0.04
RABGGTA-220ENST00000560998 ERP27Q96DN0 273 aa14.77□□□□□ -0.04
RABGGTA-220ENST00000560998 NDNQ99608 321 aa14.77□□□□□ -0.04
RABGGTA-220ENST00000560998 HOXC10Q9NYD6 342 aa14.77□□□□□ -0.04
RABGGTA-220ENST00000560998 IL1RAPL1Q9NZN1 696 aa14.77□□□□□ -0.04
RABGGTA-220ENST00000560998 SLC9A2Q9UBY0 812 aa14.77□□□□□ -0.04
RABGGTA-220ENST00000560998 A0A1B0GVG6 124 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 GSTT1P30711 240 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 HIRAP54198 1017 aaPredicted RBP14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 ACTR2P61160 394 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 IL9RQ01113 521 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 PPATQ06203 517 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 CCDC6Q16204 474 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 SLC39A4Q6P5W5 647 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 ABHD15Q6UXT9 468 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 PALB2Q86YC2 1186 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 CCDC125Q86Z20 511 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 CCDC60Q8IWA6 550 aaPredicted RBP14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 PPFIBP2Q8ND30 876 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 STKLD1Q8NE28 680 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 GATA6Q92908 595 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 ARHGEF26Q96DR7 871 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 PITPNM3Q9BZ71 974 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 UBE2OQ9C0C9 1292 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 OSGEPQ9NPF4 335 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 SEPT11Q9NVA2 429 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 LGALS13Q9UHV8 139 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 NR2E1Q9Y466 385 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 PCDHA3Q9Y5H8 950 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 COMMD3-BMI1R4GMX3 469 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 POLR2AP24928 1970 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 MIF4GDA9UHW6 222 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 DGAT1O75907 488 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 ABCB4P21439 1286 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 CTNNA2P26232 953 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 PTPN4P29074 926 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 RTP1P59025 263 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 PRKCEQ02156 737 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 SH3D19Q5HYK7 790 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 SH2D4BQ5SQS7 431 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 RGS9BPQ6ZS82 235 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 ANKRD42Q8N9B4 389 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 MCPH1Q8NEM0 835 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.76□□□□□ -0.051e-6■□□□□ 11.1
RABGGTA-220ENST00000560998 UCMAQ8WVF2 138 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 GLG1Q92896 1179 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 KAT5Q92993 513 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 SLC7A6OSQ96CW6 309 aaPredicted RBP14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 MIS12Q9H081 205 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 DENND2DQ9H6A0 471 aaPredicted RBP14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 KCNK9Q9NPC2 374 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 XPNPEP1Q9NQW7 623 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 SAR1AQ9NR31 198 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 CIDEBQ9UHD4 219 aa14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 SEPT9Q9UHD8 586 aaPredicted RBP14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 MYH9P35579 1960 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-220ENST00000560998 PASKQ96RG2 1323 aa14.75□□□□□ -0.05
RABGGTA-220ENST00000560998 ANKRD62A6NC57 917 aa14.75□□□□□ -0.05
RABGGTA-220ENST00000560998 MYBL1P10243 752 aa14.75□□□□□ -0.05
RABGGTA-220ENST00000560998 BRAFP15056 766 aa14.75□□□□□ -0.05
RABGGTA-220ENST00000560998 TAC1P20366 129 aa14.75□□□□□ -0.05
RABGGTA-220ENST00000560998 SP4Q02446 784 aa14.75□□□□□ -0.05
RABGGTA-220ENST00000560998 MTA1Q13330 715 aa14.75□□□□□ -0.05
RABGGTA-220ENST00000560998 PRPF4BQ13523 1007 aaKnown RBP14.75□□□□□ -0.05
RABGGTA-220ENST00000560998 MYBPC3Q14896 1274 aa14.75□□□□□ -0.05
RABGGTA-220ENST00000560998 R3HDM1Q15032 1099 aaKnown RBP14.75□□□□□ -0.05
RABGGTA-220ENST00000560998 SUPT20HL1Q3ZLR7 823 aa14.75□□□□□ -0.05
RABGGTA-220ENST00000560998 SNX30Q5VWJ9 437 aa14.75□□□□□ -0.05
RABGGTA-220ENST00000560998 ARMC3Q5W041 872 aa14.75□□□□□ -0.05
RABGGTA-220ENST00000560998 SMC1BQ8NDV3 1235 aa14.75□□□□□ -0.05
RABGGTA-220ENST00000560998 TMC2Q8TDI7 906 aa14.75□□□□□ -0.05
RABGGTA-220ENST00000560998 SEMA4DQ92854 862 aa14.75□□□□□ -0.05
RABGGTA-220ENST00000560998 MFSD14AQ96MC6 490 aa14.75□□□□□ -0.05
RABGGTA-220ENST00000560998 FBXL18Q96ME1 805 aa14.75□□□□□ -0.05
RABGGTA-220ENST00000560998 HAPLN3Q96S86 360 aa14.75□□□□□ -0.05
RABGGTA-220ENST00000560998 THAP2Q9H0W7 228 aa14.75□□□□□ -0.05
RABGGTA-220ENST00000560998 ERVK-5Q9HDB9 667 aa14.75□□□□□ -0.05
RABGGTA-220ENST00000560998 CYP26B1Q9NR63 512 aa14.75□□□□□ -0.05
RABGGTA-220ENST00000560998 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.75□□□□□ -0.05
RABGGTA-220ENST00000560998 SORBS3O60504 671 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 USP2O75604 605 aaPredicted RBP14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 SUPT20HL2P0C7V6 817 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 TARSP26639 723 aaKnown RBP14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 SERPINB4P48594 390 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 AP1B1Q10567 949 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 KRT39Q6A163 491 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 FAM71AQ8IYT1 594 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 GPC2Q8N158 579 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 NLGN2Q8NFZ4 835 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 CCDC127Q96BQ5 260 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 KREMEN1Q96MU8 473 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 OLFM3Q96PB7 478 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 CENPKQ9BS16 269 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 TUBB6Q9BUF5 446 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 TMEM8AQ9HCN3 771 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 DNAAF2Q9NVR5 837 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms