RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 LRRC52Q8N7C0 313 aa9.7□□□□□ -0.86
SNRPA1-214ENST00000560987 SPATA20Q8TB22 786 aa9.7□□□□□ -0.86
SNRPA1-214ENST00000560987 SLC7A14Q8TBB6 771 aa9.7□□□□□ -0.86
SNRPA1-214ENST00000560987 TMC2Q8TDI7 906 aa9.7□□□□□ -0.86
SNRPA1-214ENST00000560987 FAM122AQ96E09 287 aa9.7□□□□□ -0.86
SNRPA1-214ENST00000560987 DHTKD1Q96HY7 919 aaPredicted RBP9.7□□□□□ -0.86
SNRPA1-214ENST00000560987 NECTIN4Q96NY8 510 aa9.7□□□□□ -0.86
SNRPA1-214ENST00000560987 PGLYRP2Q96PD5 576 aa9.7□□□□□ -0.86
SNRPA1-214ENST00000560987 PRKD2Q9BZL6 878 aa9.7□□□□□ -0.86
SNRPA1-214ENST00000560987 LMBRD1Q9NUN5 540 aa9.7□□□□□ -0.86
SNRPA1-214ENST00000560987 ZDHHC7Q9NXF8 308 aa9.7□□□□□ -0.86
SNRPA1-214ENST00000560987 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.7□□□□□ -0.86
SNRPA1-214ENST00000560987 NXF1Q9UBU9 619 aaKnown RBP9.7□□□□□ -0.86
SNRPA1-214ENST00000560987 SIX4Q9UIU6 781 aa9.7□□□□□ -0.86
SNRPA1-214ENST00000560987 CDH22Q9UJ99 828 aa9.7□□□□□ -0.86
SNRPA1-214ENST00000560987 NR2E1Q9Y466 385 aa9.7□□□□□ -0.86
SNRPA1-214ENST00000560987 PTPRJQ12913 1337 aa9.7□□□□□ -0.86
SNRPA1-214ENST00000560987 SPTBN5Q9NRC6 3674 aaKnown RBP9.7□□□□□ -0.86
SNRPA1-214ENST00000560987 BRWD1Q9NSI6 2320 aa9.7□□□□□ -0.86
SNRPA1-214ENST00000560987 WDR27A2RRH5 827 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 IKBKBO14920 756 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 MAPK13O15264 365 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 TBC1D4O60343 1298 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 AKAP3O75969 853 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 ABLIM3O94929 683 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 CYP11A1P05108 521 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 PDGFRBP09619 1106 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 HNRNPA1P09651 372 aaKnown RBP eCLIP9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 ATF2P15336 505 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 CCNE1P24864 410 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 GBP2P32456 591 aaPredicted RBP9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 SCN1AP35498 2009 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 GNL1P36915 607 aaPredicted RBP9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 ALDH1A3P47895 512 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 MYL6P60660 151 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 MYL7Q01449 175 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 TSPY1Q01534 308 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 MORC3Q14149 939 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 TAF12Q16514 161 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 NFIL3Q16649 462 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 TPD52L1Q16890 204 aaPredicted RBP9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 SGSM1Q2NKQ1 1148 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 SLC39A12Q504Y0 691 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 SLC8B1Q6J4K2 584 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 CYP26C1Q6V0L0 522 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 C15orf39Q6ZRI6 1047 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 CLEC17AQ6ZS10 378 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 GRASPQ7Z6J2 395 aaPredicted RBP9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 DCP1BQ8IZD4 617 aaKnown RBP9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 TMEM86AQ8N2M4 240 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 CCDC150Q8NCX0 1101 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 FAM200AQ8TCP9 573 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 PLEKHO2Q8TD55 490 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 NELFBQ8WX92 580 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 SYAP1Q96A49 352 aaPredicted RBP9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 ACSF2Q96CM8 615 aaPredicted RBP9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 BORCS6Q96GS4 357 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 ZNF512Q96ME7 567 aaPredicted RBP9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 TMEM209Q96SK2 561 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 LRFN3Q9BTN0 628 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 SNX25Q9H3E2 840 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 CLSTN2Q9H4D0 955 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 POMKQ9H5K3 350 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 GDAP2Q9NXN4 497 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 DDX43Q9NXZ2 648 aaKnown RBP9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 AFF4Q9UHB7 1163 aaKnown RBP9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 FBXW11Q9UKB1 542 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 CTNND2Q9UQB3 1225 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 SLC27A5Q9Y2P5 690 aa9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 ARIH1Q9Y4X5 557 aaPredicted RBP9.69□□□□□ -0.86
SNRPA1-214ENST00000560987 VWA8A3KMH1 1905 aa9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 MTCL1Q9Y4B5 1905 aaKnown RBP9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 PLXNA3P51805 1871 aa9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 BICDL2A1A5D9 508 aa9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 TRIM49BA6NDI0 452 aa9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 PPP1R3GB7ZBB8 358 aa9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 STX10O60499 249 aa9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 SEC24AO95486 1093 aa9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 FGFR1OPO95684 399 aaKnown RBP9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 C4BPAP04003 597 aaKnown RBP9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 TRIM49P0CI25 452 aa9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 TRIM49CP0CI26 452 aa9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 P4HA1P13674 534 aa9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 PTPN2P17706 415 aa9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 ACAT1P24752 427 aaKnown RBP9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 ATICP31939 592 aa9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 PIK3CAP42336 1068 aa9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 GCLMP48507 274 aa9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 LHX1P48742 406 aa9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 LRRC63Q05C16 580 aa9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 DUSP4Q13115 394 aa9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 NCOA4Q13772 614 aa9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 CCDC40Q4G0X9 1142 aa9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 COBLL1Q53SF7 1204 aa9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 DCAF17Q5H9S7 520 aaPredicted RBP9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 ZNF667Q5HYK9 610 aa9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 TDRD10Q5VZ19 366 aaKnown RBP9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 IQCEQ6IPM2 695 aa9.68□□□□□ -0.86
SNRPA1-214ENST00000560987 SV2AQ7L0J3 742 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms