RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 ASB7Q9H672 318 aa8.65□□□□□ -1.02
CPNE6-218ENST00000560845 AGO3Q9H9G7 860 aaKnown RBP8.65□□□□□ -1.02
CPNE6-218ENST00000560845 NHEJ1Q9H9Q4 299 aaPredicted RBP8.65□□□□□ -1.02
CPNE6-218ENST00000560845 UBE2TQ9NPD8 197 aaPredicted RBP8.65□□□□□ -1.02
CPNE6-218ENST00000560845 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.65□□□□□ -1.02
CPNE6-218ENST00000560845 AIPL1Q9NZN9 384 aa8.65□□□□□ -1.02
CPNE6-218ENST00000560845 CLEC1BQ9P126 229 aa8.65□□□□□ -1.02
CPNE6-218ENST00000560845 ARHGAP20Q9P2F6 1191 aa8.65□□□□□ -1.02
CPNE6-218ENST00000560845 DNAI1Q9UI46 699 aa8.65□□□□□ -1.02
CPNE6-218ENST00000560845 BARX2Q9UMQ3 279 aaPredicted RBP8.65□□□□□ -1.02
CPNE6-218ENST00000560845 EPN1Q9Y6I3 576 aaPredicted RBP8.65□□□□□ -1.02
CPNE6-218ENST00000560845 CACNA1HO95180 2353 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 GOLGA6L9A6NEM1 432 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 LACTBL1A8MY62 500 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 GPR182O15218 404 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 MEFVO15553 781 aaPredicted RBP8.64□□□□□ -1.03
CPNE6-218ENST00000560845 AKR1B10O60218 316 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 RECQL4O94761 1208 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 GFPT2O94808 682 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 GLP2RO95838 553 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 PLEKP08567 350 aaPredicted RBP8.64□□□□□ -1.03
CPNE6-218ENST00000560845 CCDC172P0C7W6 258 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 PNMA6AP0CW24 399 aaPredicted RBP8.64□□□□□ -1.03
CPNE6-218ENST00000560845 ANXA13P27216 316 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 EIF4A3P38919 411 aaKnown RBP8.64□□□□□ -1.03
CPNE6-218ENST00000560845 PRKCIP41743 596 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 ARHGAP25P42331 645 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 NRIP1P48552 1158 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 KIF11P52732 1056 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 MFAP3P55082 362 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 NOP14P78316 857 aaKnown RBP8.64□□□□□ -1.03
CPNE6-218ENST00000560845 ZXDAP98168 799 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 GCNT1Q02742 428 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 TCF15Q12870 199 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 PAK2Q13177 524 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 MAPK8IP2Q13387 824 aaPredicted RBP8.64□□□□□ -1.03
CPNE6-218ENST00000560845 TRPC3Q13507 836 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 CBX2Q14781 532 aaPredicted RBP8.64□□□□□ -1.03
CPNE6-218ENST00000560845 TMEM132DQ14C87 1099 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 SLC10A6Q3KNW5 377 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 PAN2Q504Q3 1202 aaKnown RBP8.64□□□□□ -1.03
CPNE6-218ENST00000560845 UBXN11Q5T124 520 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 HGSNATQ68CP4 663 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 JADE1Q6IE81 842 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 ENOSF1Q7L5Y1 443 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 TRAPPC11Q7Z392 1133 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 NT5DC4Q86YG4 428 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 HACE1Q8IYU2 909 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 CRIPAKQ8N1N5 446 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 KLHL23Q8NBE8 558 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 HELQQ8TDG4 1101 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 POF1BQ8WVV4 589 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 KAT5Q92993 513 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 CCDC42Q96M95 316 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 KREMEN1Q96MU8 473 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 PRRX2Q99811 253 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 PI4K2AQ9BTU6 479 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 APOL6Q9BWW8 343 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 FTHL17Q9BXU8 183 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 GPR88Q9GZN0 384 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 ERVK-5Q9HDB9 667 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 SNTG2Q9NY99 539 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.64□□□□□ -1.03
CPNE6-218ENST00000560845 ST3GAL5Q9UNP4 418 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 REXO2Q9Y3B8 237 aaKnown RBP8.64□□□□□ -1.03
CPNE6-218ENST00000560845 C2CD2Q9Y426 696 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 USP15Q9Y4E8 981 aaPredicted RBP8.64□□□□□ -1.03
CPNE6-218ENST00000560845 BZW2Q9Y6E2 419 aaKnown RBP8.64□□□□□ -1.03
CPNE6-218ENST00000560845 V9GYY5 206 aaPredicted RBP8.64□□□□□ -1.03
CPNE6-218ENST00000560845 USP34Q70CQ2 3546 aa8.64□□□□□ -1.03
CPNE6-218ENST00000560845 TTC3P53804 2025 aa8.63□□□□□ -1.03
CPNE6-218ENST00000560845 EIF3CLB5ME19 914 aaKnown RBP8.63□□□□□ -1.03
CPNE6-218ENST00000560845 ASS1P00966 412 aaKnown RBP8.63□□□□□ -1.03
CPNE6-218ENST00000560845 H2AFXP16104 143 aaPredicted RBP8.63□□□□□ -1.03
CPNE6-218ENST00000560845 TBXAS1P24557 533 aaPredicted RBP8.63□□□□□ -1.03
CPNE6-218ENST00000560845 GATMP50440 423 aa8.63□□□□□ -1.03
CPNE6-218ENST00000560845 KRT83P78385 493 aa8.63□□□□□ -1.03
CPNE6-218ENST00000560845 NFX1Q12986 1120 aaKnown RBP8.63□□□□□ -1.03
CPNE6-218ENST00000560845 CUL2Q13617 745 aa8.63□□□□□ -1.03
CPNE6-218ENST00000560845 SPA17Q15506 151 aa8.63□□□□□ -1.03
CPNE6-218ENST00000560845 ZNF699Q32M78 642 aa8.63□□□□□ -1.03
CPNE6-218ENST00000560845 FBXO38Q6PIJ6 1188 aa8.63□□□□□ -1.03
CPNE6-218ENST00000560845 RBM23Q86U06 439 aaKnown RBP8.63□□□□□ -1.03
CPNE6-218ENST00000560845 RTN4RL1Q86UN2 441 aaPredicted RBP8.63□□□□□ -1.03
CPNE6-218ENST00000560845 VPS36Q86VN1 386 aa8.63□□□□□ -1.03
CPNE6-218ENST00000560845 FBXL6Q8N531 539 aa8.63□□□□□ -1.03
CPNE6-218ENST00000560845 SHC3Q92529 594 aa8.63□□□□□ -1.03
CPNE6-218ENST00000560845 KIF12Q96FN5 646 aa8.63□□□□□ -1.03
CPNE6-218ENST00000560845 EIF3CQ99613 913 aaKnown RBP8.63□□□□□ -1.03
CPNE6-218ENST00000560845 PHF7Q9BWX1 381 aaPredicted RBP8.63□□□□□ -1.03
CPNE6-218ENST00000560845 NIF3L1Q9GZT8 377 aa8.63□□□□□ -1.03
CPNE6-218ENST00000560845 HAUS4Q9H6D7 363 aa8.63□□□□□ -1.03
CPNE6-218ENST00000560845 PLEKHA5Q9HAU0 1116 aa8.63□□□□□ -1.03
CPNE6-218ENST00000560845 CHST12Q9NRB3 414 aa8.63□□□□□ -1.03
CPNE6-218ENST00000560845 FAM53CQ9NYF3 392 aa8.63□□□□□ -1.03
CPNE6-218ENST00000560845 CNTN3Q9P232 1028 aa8.63□□□□□ -1.03
CPNE6-218ENST00000560845 DERAQ9Y315 318 aa8.63□□□□□ -1.03
CPNE6-218ENST00000560845 HES2Q9Y543 173 aa8.63□□□□□ -1.03
CPNE6-218ENST00000560845 IPPQ9Y573 584 aa8.63□□□□□ -1.03
CPNE6-218ENST00000560845 PCDHGC5Q9Y5F6 944 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms