RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 RASGRP4Q8TDF6 673 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 CCT8L2Q96SF2 557 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 POLR1BQ9H9Y6 1135 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 RPRD2Q5VT52 1461 aaKnown RBP14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 NR3C1P04150 777 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 CASP4P49662 377 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 MANSC1Q9H8J5 431 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 ZHX2Q9Y6X8 837 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 IQGAP2Q13576 1575 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 INSRP06213 1382 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 RTN2O75298 545 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 KDELC2Q7Z4H8 507 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 C1orf54Q8WWF1 131 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 RASSF5Q8WWW0 418 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 CD209Q9NNX6 404 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 ABCC4O15439 1325 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 PNMA6EA0A0J9YXQ4 647 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 MOCS2O96007 188 aaPredicted RBP14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 ITGB3BPQ13352 177 aaPredicted RBP14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 SPANXN2Q5MJ10 180 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 PGBD3Q8N328 593 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 SMAPO00193 183 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 FAM20BO75063 409 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 SOAT2O75908 522 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 NT5DC4Q86YG4 428 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 ZBTB10Q96DT7 871 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 FAM49AQ9H0Q0 323 aaPredicted RBP14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 MARCOQ9UEW3 520 aaPredicted RBP14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 POLBP06746 335 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 PTK7Q13308 1070 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 FAM192AQ9GZU8 254 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 SLC25A13Q9UJS0 675 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 FAM220BPB1ANY3 271 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 CLPTM1O96005 669 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 RCVRNP35243 200 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 DGUOKQ16854 277 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 DOK7Q18PE1 504 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 ULK3Q6PHR2 472 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 G2E3Q7L622 706 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 ERP27Q96DN0 273 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 C11orf70Q9BRQ4 267 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 PIK3C2GO75747 1445 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 NESP48681 1621 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 CDH16O75309 829 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 ADORA2BP29275 332 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 SERPINB8P50452 374 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 ATP1A4Q13733 1029 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 CCDC157Q569K6 752 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 ARHGAP27Q6ZUM4 889 aa14.42□□□□□ -0.1
CSPG4P12-202ENST00000559989 NEURL1BA8MQ27 555 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 PHF2O75151 1096 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 FCHO2Q0JRZ9 810 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 C4orf22Q6V702 233 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 SPATA2LQ8IUW3 424 aaPredicted RBP14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 COPS7BQ9H9Q2 264 aaPredicted RBP14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 KLHL1Q9NR64 748 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 KLHL11Q9NVR0 708 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 PARD3Q8TEW0 1356 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 HOXC9P31274 260 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 NFX1Q12986 1120 aaKnown RBP14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 LIN54Q6MZP7 749 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 LPCAT2Q7L5N7 544 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 FLAD1Q8NFF5 587 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 ZBTB39O15060 712 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 PPP1R37O75864 691 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 PTPN1P18031 435 aaKnown RBP14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 ALOX12P18054 663 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 NOS3P29474 1203 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 BTN3A2P78410 334 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 RESTQ13127 1097 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 MZT2AQ6P582 158 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 CCDC126Q96EE4 140 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 CLCC1Q96S66 551 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 FAM213AQ9BRX8 229 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 NOL6Q9H6R4 1146 aaKnown RBP14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 CPB1P15086 417 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 PEX5P50542 639 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 KRT24Q2M2I5 525 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 PJA1Q8NG27 643 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 APOL5Q9BWW9 433 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 ERN1O75460 977 aaKnown RBP14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 ITGA3P26006 1051 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 GPC1P35052 558 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 POMGNT2Q8NAT1 580 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 KCNH2Q12809 1159 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 TRAF3Q13114 568 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 FAM83EQ2M2I3 478 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 RESP18Q5W5W9 173 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 CYFIP1Q7L576 1253 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 BPIFA3Q9BQP9 254 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 VPS33BQ9H267 617 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 COMMD8Q9NX08 183 aa14.41□□□□□ -0.1
CSPG4P12-202ENST00000559989 IFT140Q96RY7 1462 aa14.4□□□□□ -0.1
CSPG4P12-202ENST00000559989 KRT34O76011 436 aa14.4□□□□□ -0.1
CSPG4P12-202ENST00000559989 CYP2C19P33261 490 aa14.4□□□□□ -0.1
CSPG4P12-202ENST00000559989 BCAMP50895 628 aa14.4□□□□□ -0.1
CSPG4P12-202ENST00000559989 PRELPP51888 382 aa14.4□□□□□ -0.1
CSPG4P12-202ENST00000559989 THNSL1Q8IYQ7 743 aa14.4□□□□□ -0.1
CSPG4P12-202ENST00000559989 HAVCR1Q96D42 359 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms