RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 PSMD5Q16401 504 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 SOWAHAQ2M3V2 549 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 CTXN3Q4LDR2 81 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 RTP2Q5QGT7 225 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 VARS2Q5ST30 1063 aaKnown RBP7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 SPECC1LQ69YQ0 1117 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 IQCEQ6IPM2 695 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 PHLDB3Q6NSJ2 640 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 ANKS3Q6ZW76 656 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 TAS1R1Q7RTX1 841 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 TMC6Q7Z403 805 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 PPFIBP1Q86W92 1011 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 VSTM4Q8IW00 320 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 DRC7Q8IY82 874 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 ZNF397Q8NF99 534 aaPredicted RBP7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 SPPL3Q8TCT6 385 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 MICAL1Q8TDZ2 1067 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 GDPD5Q8WTR4 605 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 POF1BQ8WVV4 589 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 RIN2Q8WYP3 895 aaPredicted RBP7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 PIK3R5Q8WYR1 880 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 KAT5Q92993 513 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 B3GALT6Q96L58 329 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 ARID3AQ99856 593 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 TCF25Q9BQ70 676 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 MRPL45Q9BRJ2 306 aaKnown RBP7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 NUP58Q9BVL2 599 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 VN1R3Q9BXE9 311 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 OXCT2Q9BYC2 517 aaPredicted RBP7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 BCO2Q9BYV7 579 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 LMAN2LQ9H0V9 348 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 ZBP1Q9H171 429 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 GANQ9H2C0 597 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 FAM124BQ9H5Z6 455 aaPredicted RBP7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 ZNF576Q9H609 170 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 SIX2Q9NPC8 291 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 NLRC4Q9NPP4 1024 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 TLR9Q9NR96 1032 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 MRPL17Q9NRX2 175 aaKnown RBP7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 CISHQ9NSE2 258 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 DDX43Q9NXZ2 648 aaKnown RBP7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 CEP72Q9P209 647 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 CHD7Q9P2D1 2997 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 BARX2Q9UMQ3 279 aaPredicted RBP7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 PCDHB4Q9Y5E5 795 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 FHOD1Q9Y613 1164 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 TRIP11Q15643 1979 aa7.05□□□□□ -1.28
CHRNA3-204ENST00000559002 ITIH6Q6UXX5 1313 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 OR6C75A6NL08 312 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 GRM6O15303 877 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 CILPO75339 1184 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 PDGFRBP09619 1106 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 CTSAP10619 480 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 CPB1P15086 417 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 CDC25BP30305 580 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 STAT1P42224 750 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 NDST1P52848 882 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 ARPP19P56211 112 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 DSG1Q02413 1049 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 INCA1Q0VD86 236 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 SMC1AQ14683 1233 aaKnown RBP7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 DRAP1Q14919 205 aaPredicted RBP7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 PTPN14Q15678 1187 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 PTPROQ16827 1216 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 FIGNQ5HY92 759 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 ZNF697Q5TEC3 545 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 PLPP4Q5VZY2 271 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 TMEM270Q6UE05 265 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 PRSS55Q6UWB4 352 aaPredicted RBP7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 LIMS2Q7Z4I7 341 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 UNC93AQ86WB7 457 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 OSTM1Q86WC4 334 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 FMNL3Q8IVF7 1028 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 GPR65Q8IYL9 337 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 RNF168Q8IYW5 571 aaPredicted RBP7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 DCP1BQ8IZD4 617 aaKnown RBP7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 RBBP8NLQ8NC74 664 aaPredicted RBP7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 KBTBD7Q8WVZ9 684 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 AUTS2Q8WXX7 1259 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 JAKMIP2Q96AA8 810 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 TNIP3Q96KP6 325 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 KREMEN1Q96MU8 473 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 SYT15Q9BQS2 421 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 NT5C1AQ9BXI3 368 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 EMILIN2Q9BXX0 1053 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 STK33Q9BYT3 514 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 SDCBP2Q9H190 292 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 NGRNQ9NPE2 291 aaKnown RBP7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 CHST7Q9NS84 486 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 MTRRQ9UBK8 725 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 FBXL5Q9UKA1 691 aa7.04□□□□□ -1.28
CHRNA3-204ENST00000559002 A0A1W2PQJ5 194 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 F8VZ95 297 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 SOX1O00570 391 aaPredicted RBP7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 GABRDO14764 452 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 EPHB6O15197 1021 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 NOL4O94818 638 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 OAZ2O95190 189 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms