RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 ELSPBP1Q96BH3 223 aa18.36■□□□□ 0.53
LRRC28-210ENST00000558879 ZNF512Q96ME7 567 aaPredicted RBP18.36■□□□□ 0.53
LRRC28-210ENST00000558879 ASB16Q96NS5 453 aa18.36■□□□□ 0.53
LRRC28-210ENST00000558879 PCIF1Q9H4Z3 704 aa18.36■□□□□ 0.53
LRRC28-210ENST00000558879 RCOR1Q9UKL0 485 aa18.36■□□□□ 0.53
LRRC28-210ENST00000558879 PTPRJQ12913 1337 aa18.35■□□□□ 0.53
LRRC28-210ENST00000558879 POLR2BP30876 1174 aaKnown RBP18.35■□□□□ 0.53
LRRC28-210ENST00000558879 TFAMQ00059 246 aaKnown RBP18.35■□□□□ 0.53
LRRC28-210ENST00000558879 CYP4A22Q5TCH4 519 aa18.35■□□□□ 0.53
LRRC28-210ENST00000558879 ATAD1Q8NBU5 361 aa18.35■□□□□ 0.53
LRRC28-210ENST00000558879 SPRYD3Q8NCJ5 442 aa18.35■□□□□ 0.53
LRRC28-210ENST00000558879 FAM84AQ96KN4 292 aa18.35■□□□□ 0.53
LRRC28-210ENST00000558879 DDX23Q9BUQ8 820 aaKnown RBP18.35■□□□□ 0.53
LRRC28-210ENST00000558879 PLA2G2FQ9BZM2 168 aa18.35■□□□□ 0.53
LRRC28-210ENST00000558879 PDE11AQ9HCR9 933 aa18.35■□□□□ 0.53
LRRC28-210ENST00000558879 FAM86C1Q9NVL1 165 aa18.35■□□□□ 0.53
LRRC28-210ENST00000558879 FAM13BQ9NYF5 915 aa18.35■□□□□ 0.53
LRRC28-210ENST00000558879 DLGAP2Q9P1A6 1054 aa18.35■□□□□ 0.53
LRRC28-210ENST00000558879 ITGA11Q9UKX5 1188 aa18.35■□□□□ 0.53
LRRC28-210ENST00000558879 ZDHHC9Q9Y397 364 aa18.35■□□□□ 0.53
LRRC28-210ENST00000558879 F5P12259 2224 aa18.35■□□□□ 0.53
LRRC28-210ENST00000558879 NCANO14594 1321 aa18.34■□□□□ 0.53
LRRC28-210ENST00000558879 H0Y858 1186 aa18.34■□□□□ 0.53
LRRC28-210ENST00000558879 TGFB1I1O43294 461 aa18.34■□□□□ 0.53
LRRC28-210ENST00000558879 CASP1P29466 404 aa18.34■□□□□ 0.53
LRRC28-210ENST00000558879 BMT2Q1RMZ1 405 aa18.34■□□□□ 0.53
LRRC28-210ENST00000558879 FAM78AQ5JUQ0 283 aa18.34■□□□□ 0.53
LRRC28-210ENST00000558879 WSCD1Q658N2 575 aa18.34■□□□□ 0.53
LRRC28-210ENST00000558879 SCARA3Q6AZY7 606 aa18.34■□□□□ 0.53
LRRC28-210ENST00000558879 TANGO2Q6ICL3 276 aa18.34■□□□□ 0.53
LRRC28-210ENST00000558879 SHKBP1Q8TBC3 707 aa18.34■□□□□ 0.53
LRRC28-210ENST00000558879 CACTINQ8WUQ7 758 aaKnown RBP18.34■□□□□ 0.53
LRRC28-210ENST00000558879 SCFD1Q8WVM8 642 aa18.34■□□□□ 0.53
LRRC28-210ENST00000558879 PSMG2Q969U7 264 aa18.34■□□□□ 0.53
LRRC28-210ENST00000558879 MTMR12Q9C0I1 747 aa18.34■□□□□ 0.53
LRRC28-210ENST00000558879 TRPV4Q9HBA0 871 aa18.34■□□□□ 0.53
LRRC28-210ENST00000558879 HSPBP1Q9NZL4 362 aa18.34■□□□□ 0.53
LRRC28-210ENST00000558879 SIX4Q9UIU6 781 aa18.34■□□□□ 0.53
LRRC28-210ENST00000558879 MYH10P35580 1976 aa18.33■□□□□ 0.53
LRRC28-210ENST00000558879 PVALEFA0A1B0GWK0 134 aa18.33■□□□□ 0.52
LRRC28-210ENST00000558879 ACTN4O43707 911 aaKnown RBP18.33■□□□□ 0.52
LRRC28-210ENST00000558879 MYL4P12829 197 aa18.33■□□□□ 0.52
LRRC28-210ENST00000558879 ATF6P18850 670 aa18.33■□□□□ 0.52
LRRC28-210ENST00000558879 PFKPQ01813 784 aa18.33■□□□□ 0.52
LRRC28-210ENST00000558879 PRKCQQ04759 706 aa18.33■□□□□ 0.52
LRRC28-210ENST00000558879 SMARCB1Q12824 385 aa18.33■□□□□ 0.52
LRRC28-210ENST00000558879 MLF2Q15773 248 aaPredicted RBP18.33■□□□□ 0.52
LRRC28-210ENST00000558879 SLC39A12Q504Y0 691 aa18.33■□□□□ 0.52
LRRC28-210ENST00000558879 METTL23Q86XA0 190 aa18.33■□□□□ 0.52
LRRC28-210ENST00000558879 CBWD2Q8IUF1 395 aa18.33■□□□□ 0.52
LRRC28-210ENST00000558879 DTWD2Q8NBA8 298 aa18.33■□□□□ 0.52
LRRC28-210ENST00000558879 PJA1Q8NG27 643 aa18.33■□□□□ 0.52
LRRC28-210ENST00000558879 SPPL2BQ8TCT7 592 aa18.33■□□□□ 0.52
LRRC28-210ENST00000558879 C2orf15Q8WU43 125 aaKnown RBP18.33■□□□□ 0.52
LRRC28-210ENST00000558879 BLZF1Q9H2G9 400 aa18.33■□□□□ 0.52
LRRC28-210ENST00000558879 ZNF334Q9HCZ1 680 aaPredicted RBP18.33■□□□□ 0.52
LRRC28-210ENST00000558879 AGPAT3Q9NRZ7 376 aa18.33■□□□□ 0.52
LRRC28-210ENST00000558879 GDAP2Q9NXN4 497 aa18.33■□□□□ 0.52
LRRC28-210ENST00000558879 L1RE1Q9UN81 338 aa18.33■□□□□ 0.52
LRRC28-210ENST00000558879 AGAP1Q9UPQ3 857 aa18.33■□□□□ 0.52
LRRC28-210ENST00000558879 SLC27A5Q9Y2P5 690 aa18.33■□□□□ 0.52
LRRC28-210ENST00000558879 ASB3Q9Y575 518 aa18.33■□□□□ 0.52
LRRC28-210ENST00000558879 PROB1E7EW31 1015 aa18.32■□□□□ 0.52
LRRC28-210ENST00000558879 KLRC4O43908 158 aa18.32■□□□□ 0.52
LRRC28-210ENST00000558879 SOAT2O75908 522 aa18.32■□□□□ 0.52
LRRC28-210ENST00000558879 TMEM191BP0C7N4 346 aa18.32■□□□□ 0.52
LRRC28-210ENST00000558879 GJA1P17302 382 aa18.32■□□□□ 0.52
LRRC28-210ENST00000558879 ALDH1A3P47895 512 aa18.32■□□□□ 0.52
LRRC28-210ENST00000558879 EPHB3P54753 998 aa18.32■□□□□ 0.52
LRRC28-210ENST00000558879 SNRPFP62306 86 aaKnown RBP18.32■□□□□ 0.52
LRRC28-210ENST00000558879 CUL4BQ13620 913 aa18.32■□□□□ 0.52
LRRC28-210ENST00000558879 TEAD2Q15562 447 aa18.32■□□□□ 0.52
LRRC28-210ENST00000558879 LRRTM3Q86VH5 581 aa18.32■□□□□ 0.52
LRRC28-210ENST00000558879 THEM5Q8N1Q8 247 aa18.32■□□□□ 0.52
LRRC28-210ENST00000558879 PDCL2Q8N4E4 241 aa18.32■□□□□ 0.52
LRRC28-210ENST00000558879 SPATA18Q8TC71 538 aa18.32■□□□□ 0.52
LRRC28-210ENST00000558879 LEO1Q8WVC0 666 aaPredicted RBP18.32■□□□□ 0.52
LRRC28-210ENST00000558879 DNASE1L2Q92874 299 aa18.32■□□□□ 0.52
LRRC28-210ENST00000558879 SMARCD2Q92925 531 aa18.32■□□□□ 0.52
LRRC28-210ENST00000558879 ZSWIM3Q96MP5 696 aa18.32■□□□□ 0.52
LRRC28-210ENST00000558879 MKNK1Q9BUB5 465 aa18.32■□□□□ 0.52
LRRC28-210ENST00000558879 KIAA1586Q9HCI6 787 aa18.32■□□□□ 0.52
LRRC28-210ENST00000558879 ZFP14Q9HCL3 533 aa18.32■□□□□ 0.52
LRRC28-210ENST00000558879 INTS13Q9NVM9 706 aa18.32■□□□□ 0.52
LRRC28-210ENST00000558879 MYO16Q9Y6X6 1858 aa18.32■□□□□ 0.52
LRRC28-210ENST00000558879 KIAA1549LQ6ZVL6 1849 aa18.32■□□□□ 0.52
LRRC28-210ENST00000558879 VPS13AQ96RL7 3174 aa18.32■□□□□ 0.52
LRRC28-210ENST00000558879 DMDP11532 3685 aa18.31■□□□□ 0.52
LRRC28-210ENST00000558879 A0A1W2PRU2 124 aa18.31■□□□□ 0.52
LRRC28-210ENST00000558879 ZNF233A6NK53 670 aa18.31■□□□□ 0.52
LRRC28-210ENST00000558879 SHISA7A6NL88 538 aa18.31■□□□□ 0.52
LRRC28-210ENST00000558879 SLFN14P0C7P3 912 aa18.31■□□□□ 0.52
LRRC28-210ENST00000558879 GLULP15104 373 aa18.31■□□□□ 0.52
LRRC28-210ENST00000558879 NBL1P41271 181 aa18.31■□□□□ 0.52
LRRC28-210ENST00000558879 SNW1Q13573 536 aaKnown RBP18.31■□□□□ 0.52
LRRC28-210ENST00000558879 SURF1Q15526 300 aa18.31■□□□□ 0.52
LRRC28-210ENST00000558879 LMBRD2Q68DH5 695 aaPredicted RBP18.31■□□□□ 0.52
LRRC28-210ENST00000558879 VITQ6UXI7 678 aa18.31■□□□□ 0.52
LRRC28-210ENST00000558879 GAREM2Q75VX8 874 aa18.31■□□□□ 0.52
LRRC28-210ENST00000558879 WDR49Q8IV35 697 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms