RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 DUSP4Q13115 394 aa17.38■□□□□ 0.37
CDC42BPB-203ENST00000558867 GPR17Q13304 367 aa17.38■□□□□ 0.37
CDC42BPB-203ENST00000558867 MYBPC2Q14324 1141 aa17.38■□□□□ 0.37
CDC42BPB-203ENST00000558867 KYAT1Q16773 422 aa17.38■□□□□ 0.37
CDC42BPB-203ENST00000558867 RILPL1Q5EBL4 403 aa17.38■□□□□ 0.37
CDC42BPB-203ENST00000558867 L1TD1Q5T7N2 865 aaKnown RBP17.38■□□□□ 0.37
CDC42BPB-203ENST00000558867 CACNA2D4Q7Z3S7 1137 aa17.38■□□□□ 0.37
CDC42BPB-203ENST00000558867 GCNAQ96QF7 691 aa17.38■□□□□ 0.37
CDC42BPB-203ENST00000558867 RBM12Q9NTZ6 932 aaKnown RBP17.38■□□□□ 0.37
CDC42BPB-203ENST00000558867 ZMYM5Q9UJ78 669 aa17.38■□□□□ 0.37
CDC42BPB-203ENST00000558867 COL4A2P08572 1712 aa17.38■□□□□ 0.37
CDC42BPB-203ENST00000558867 CCDC163A0A0D9SF12 145 aa17.37■□□□□ 0.37
CDC42BPB-203ENST00000558867 A0A1W2PQ27 194 aa17.37■□□□□ 0.37
CDC42BPB-203ENST00000558867 A0A1W2PQ64 194 aa17.37■□□□□ 0.37
CDC42BPB-203ENST00000558867 A0A1W2PQD8 194 aa17.37■□□□□ 0.37
CDC42BPB-203ENST00000558867 GOLGA6L4A6NEF3 574 aa17.37■□□□□ 0.37
CDC42BPB-203ENST00000558867 H0YCG3 227 aa17.37■□□□□ 0.37
CDC42BPB-203ENST00000558867 NRG2O14511 850 aaPredicted RBP17.37■□□□□ 0.37
CDC42BPB-203ENST00000558867 GDF9O60383 454 aa17.37■□□□□ 0.37
CDC42BPB-203ENST00000558867 CYP3A5P20815 502 aa17.37■□□□□ 0.37
CDC42BPB-203ENST00000558867 DEKP35659 375 aaKnown RBP17.37■□□□□ 0.37
CDC42BPB-203ENST00000558867 AMPD2Q01433 879 aa17.37■□□□□ 0.37
CDC42BPB-203ENST00000558867 SRSF5Q13243 272 aaKnown RBP17.37■□□□□ 0.37
CDC42BPB-203ENST00000558867 VEPH1Q14D04 833 aa17.37■□□□□ 0.37
CDC42BPB-203ENST00000558867 TAF12Q16514 161 aa17.37■□□□□ 0.37
CDC42BPB-203ENST00000558867 ECM1Q16610 540 aa17.37■□□□□ 0.37
CDC42BPB-203ENST00000558867 SLC10A6Q3KNW5 377 aa17.37■□□□□ 0.37
CDC42BPB-203ENST00000558867 ZPBP2Q6X784 338 aa17.37■□□□□ 0.37
CDC42BPB-203ENST00000558867 EXOC4Q96A65 974 aa17.37■□□□□ 0.37
CDC42BPB-203ENST00000558867 PGLYRP2Q96PD5 576 aa17.37■□□□□ 0.37
CDC42BPB-203ENST00000558867 TSPAN18Q96SJ8 248 aa17.37■□□□□ 0.37
CDC42BPB-203ENST00000558867 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.37■□□□□ 0.37
CDC42BPB-203ENST00000558867 HSFX1Q9UBD0 423 aa17.37■□□□□ 0.37
CDC42BPB-203ENST00000558867 UBQLN1Q9UMX0 589 aaKnown RBP17.37■□□□□ 0.37
CDC42BPB-203ENST00000558867 PDCD11Q14690 1871 aaKnown RBP17.37■□□□□ 0.37
CDC42BPB-203ENST00000558867 GOLGA6L3A6NEY3 463 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 AXIN1O15169 862 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 SLC16A4O15374 487 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 PPP6R2O75170 966 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 CLTAP09496 248 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 ZNF806P0C7X5 589 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 CCDC192P0DO97 292 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 WEE1P30291 646 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 LRPAP1P30533 357 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 SOX9P48436 509 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 TUFMP49411 452 aaKnown RBP17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 PPP2R3AQ06190 1150 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 SLC39A14Q15043 492 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 PON2Q15165 354 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 GPR158Q5T848 1215 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 ADALQ6DHV7 355 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 OVOS1Q6IE37 1185 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 Q6ZS52 159 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 DNAJB7Q7Z6W7 309 aaPredicted RBP17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 TMC8Q8IU68 726 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 BPIFB1Q8TDL5 484 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 SPIRE2Q8WWL2 714 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 PSMG2Q969U7 264 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 KIF12Q96FN5 646 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 NTPCRQ9BSD7 190 aaKnown RBP17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 ARRDC1-AS1Q9H2J1 176 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 TUBGCP4Q9UGJ1 667 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 SLC8A2Q9UPR5 921 aa17.36■□□□□ 0.37
CDC42BPB-203ENST00000558867 CNOT1A5YKK6 2376 aaKnown RBP17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 E9PMD0 336 aa17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 LAD1O00515 517 aa17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 SPTLC2O15270 562 aa17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 RPP40O75818 363 aaKnown RBP17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 ODC1P11926 461 aa17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 TYMPP19971 482 aa17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 GABRR2P28476 465 aa17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 CDC25CP30307 473 aa17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 GRSF1Q12849 480 aaKnown RBP eCLIP17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 CCINQ13939 588 aa17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 ITPRIPL2Q3MIP1 535 aa17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 CENPPQ6IPU0 288 aa17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 RINT1Q6NUQ1 792 aa17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 LRSAM1Q6UWE0 723 aa17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 TAS1R3Q7RTX0 852 aa17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 KCTD17Q8N5Z5 321 aa17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 IGSF22Q8N9C0 903 aa17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 TTC8Q8TAM2 541 aa17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 GAB3Q8WWW8 586 aa17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 RSPRY1Q96DX4 576 aa17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 BICD1Q96G01 975 aa17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 ZBTB45Q96K62 511 aaPredicted RBP17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 TMEM209Q96SK2 561 aa17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 LRRC3Q9BY71 257 aa17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 GTSE1Q9NYZ3 720 aa17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 PCDHGA5Q9Y5G8 931 aa17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 TIMM13Q9Y5L4 95 aaPredicted RBP17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 CHD6Q8TD26 2715 aa17.35■□□□□ 0.37
CDC42BPB-203ENST00000558867 ABLIM1O14639 778 aa17.34■□□□□ 0.37
CDC42BPB-203ENST00000558867 AKAP3O75969 853 aa17.34■□□□□ 0.37
CDC42BPB-203ENST00000558867 OR4Q2P0C623 313 aa17.34■□□□□ 0.37
CDC42BPB-203ENST00000558867 PLS3P13797 630 aa17.34■□□□□ 0.37
CDC42BPB-203ENST00000558867 GUCY2CP25092 1073 aa17.34■□□□□ 0.37
CDC42BPB-203ENST00000558867 MCL1Q07820 350 aa17.34■□□□□ 0.37
CDC42BPB-203ENST00000558867 STK38Q15208 465 aa17.34■□□□□ 0.37
CDC42BPB-203ENST00000558867 TXNDC11Q6PKC3 985 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms