RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 LINC00310P59036 64 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 TNFAIP1Q13829 316 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 RRP1BQ14684 758 aaKnown RBP7.06□□□□□ -1.28
LRRC28-209ENST00000558861 NFE2Q16621 373 aaPredicted RBP7.06□□□□□ -1.28
LRRC28-209ENST00000558861 VPS53Q5VIR6 699 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 CCDC129Q6ZRS4 1044 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 CXXC5Q7LFL8 322 aaKnown RBP7.06□□□□□ -1.28
LRRC28-209ENST00000558861 OTOP2Q7RTS6 562 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 SLC41A1Q8IVJ1 513 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 TEX11Q8IYF3 940 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 BCL6BQ8N143 479 aaPredicted RBP7.06□□□□□ -1.28
LRRC28-209ENST00000558861 SDR42E1Q8WUS8 393 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 SLC2A13Q96QE2 648 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 SLC38A3Q99624 504 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 NOL10Q9BSC4 688 aaKnown RBP7.06□□□□□ -1.28
LRRC28-209ENST00000558861 HELLSQ9NRZ9 838 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 FTSJ1Q9UET6 329 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 PRSS50Q9UI38 385 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 ZNF112Q9UJU3 913 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 CDC42EP3Q9UKI2 254 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 PCDHB6Q9Y5E3 794 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 CDK5RAP2Q96SN8 1893 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 FOCADQ5VW36 1801 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 HTTP42858 3142 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 A0A1B0GTL3 188 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 DDX3XO00571 662 aaKnown RBP eCLIP7.05□□□□□ -1.28
LRRC28-209ENST00000558861 CYP7B1O75881 506 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 KLHL18O94889 574 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 ABLIM3O94929 683 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 SNUPNO95149 360 aaKnown RBP7.05□□□□□ -1.28
LRRC28-209ENST00000558861 SCGB1D2O95969 90 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 AGXTP21549 392 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 RPL13P26373 211 aaKnown RBP7.05□□□□□ -1.28
LRRC28-209ENST00000558861 PLCD1P51178 756 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 CCT2P78371 535 aaKnown RBP7.05□□□□□ -1.28
LRRC28-209ENST00000558861 KRT85P78386 507 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 MRPS9P82933 396 aaKnown RBP7.05□□□□□ -1.28
LRRC28-209ENST00000558861 TCP10Q12799 353 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 ALX1Q15699 326 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 MCMDC2Q4G0Z9 681 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 TMEM200BQ69YZ2 307 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 MOB2Q70IA6 237 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 FMNL3Q8IVF7 1028 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 MAPKAPK5Q8IW41 473 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 POU5F2Q8N7G0 328 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 CDYL2Q8N8U2 506 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 NUDT10Q8NFP7 164 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 TSPEARQ8WU66 669 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 JADE3Q92613 823 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 RILPL2Q969X0 211 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 DACT3Q96B18 629 aaPredicted RBP7.05□□□□□ -1.28
LRRC28-209ENST00000558861 NUDT11Q96G61 164 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 RAX2Q96IS3 184 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 TEKT5Q96M29 485 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 RHOBTB2Q9BYZ6 727 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 CRNKL1Q9BZJ0 848 aaKnown RBP7.05□□□□□ -1.28
LRRC28-209ENST00000558861 HAPLN2Q9GZV7 340 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 CDH19Q9H159 772 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 ATP8A2Q9NTI2 1148 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 NTMQ9P121 344 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 IP6K2Q9UHH9 426 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 TCEAL9Q9UHQ7 104 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 EVLQ9UI08 416 aaPredicted RBP7.05□□□□□ -1.28
LRRC28-209ENST00000558861 FZD1Q9UP38 647 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 INVSQ9Y283 1065 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 GPR45Q9Y5Y3 372 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 MRFAP1Q9Y605 127 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 ROBO3Q96MS0 1386 aa7.05□□□□□ -1.28
LRRC28-209ENST00000558861 ZMYM6O95789 1325 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 CCDC171Q6TFL3 1326 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 RAD50Q92878 1312 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 KLHL33A6NCF5 533 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 NPIPB6E9PJ23 425 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 RFXAPO00287 272 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 FFAR3O14843 346 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 PAX4O43316 350 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 CELF2O95319 508 aaKnown RBP7.04□□□□□ -1.28
LRRC28-209ENST00000558861 CYP2D6P10635 497 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 HSPD1P10809 573 aaKnown RBP7.04□□□□□ -1.28
LRRC28-209ENST00000558861 FKBP1BP68106 108 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 JAG1P78504 1218 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 PICALMQ13492 652 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 SPIDRQ14159 915 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 PPP2R5AQ15172 486 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 KCNA10Q16322 511 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 DGKDQ16760 1214 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 MUM1Q2TAK8 710 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 SBK1Q52WX2 424 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 CTR9Q6PD62 1173 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 BMP8AQ7Z5Y6 402 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 OR14C36Q8NHC7 312 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.04□□□□□ -1.28
LRRC28-209ENST00000558861 GAB3Q8WWW8 586 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 AUTS2Q8WXX7 1259 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 DYDC2Q96IM9 177 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 SPATA25Q9BR10 227 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 L2HGDHQ9H9P8 463 aa7.04□□□□□ -1.28
LRRC28-209ENST00000558861 GBA2Q9HCG7 927 aaPredicted RBP7.04□□□□□ -1.28
LRRC28-209ENST00000558861 LUC7LQ9NQ29 371 aaKnown RBP7.04□□□□□ -1.28
LRRC28-209ENST00000558861 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms