RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 CCDC142Q17RM4 750 aa14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 SOWAHAQ2M3V2 549 aa14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 COBLL1Q53SF7 1204 aa14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 LIN9Q5TKA1 542 aa14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 GRASPQ7Z6J2 395 aaPredicted RBP14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 METTL23Q86XA0 190 aa14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 FAM186BQ8IYM0 893 aa14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 ATAD1Q8NBU5 361 aa14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 ST13P5Q8NFI4 369 aaPredicted RBP14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 CMASQ8NFW8 434 aaPredicted RBP14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 GPT2Q8TD30 523 aa14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 CLSTN2Q9H4D0 955 aa14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 TMLHEQ9NVH6 421 aa14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 PRKAG3Q9UGI9 489 aa14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 R3HCC1Q9Y3T6 440 aaKnown RBP14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 C2orf16Q68DN1 1984 aa14.87□□□□□ -0.03
TSPAN3-205ENST00000558745 C2CD4DB7Z1M9 353 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 LOC730098B7Z3J9 87 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 PRRG1O14668 218 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 SOAT2O75908 522 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 PAX3P23760 479 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 CCNE1P24864 410 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 LMO2P25791 158 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 ELF1P32519 619 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 GCLMP48507 274 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 MRE11P49959 708 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 CLDN10P78369 228 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 MYO1EQ12965 1108 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 DUSP4Q13115 394 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 TRPC3Q13507 836 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 EDRF1Q3B7T1 1238 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 SLC39A12Q504Y0 691 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 C15orf39Q6ZRI6 1047 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 SV2AQ7L0J3 742 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 THEM5Q8N1Q8 247 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 TTC9BQ8N6N2 239 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 TMC2Q8TDI7 906 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 NELFBQ8WX92 580 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 GBP4Q96PP9 640 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 MMS19Q96T76 1030 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 TSG101Q99816 390 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 DUSP9Q99956 384 aaKnown RBP14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 LPIN3Q9BQK8 851 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 ZCWPW1Q9H0M4 648 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 ZDHHC7Q9NXF8 308 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 GDAP2Q9NXN4 497 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 AFF4Q9UHB7 1163 aaKnown RBP14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 DPP7Q9UHL4 492 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 CTNND2Q9UQB3 1225 aa14.86□□□□□ -0.03
TSPAN3-205ENST00000558745 MTMR11A4FU01 709 aa14.85□□□□□ -0.03
TSPAN3-205ENST00000558745 OR6C75A6NL08 312 aa14.85□□□□□ -0.03
TSPAN3-205ENST00000558745 CETN3O15182 167 aa14.85□□□□□ -0.03
TSPAN3-205ENST00000558745 N4BP1O75113 896 aaKnown RBP14.85□□□□□ -0.03
TSPAN3-205ENST00000558745 PDGFRBP09619 1106 aa14.85□□□□□ -0.03
TSPAN3-205ENST00000558745 GPR17Q13304 367 aa14.85□□□□□ -0.03
TSPAN3-205ENST00000558745 UVSSAQ2YD98 709 aa14.85□□□□□ -0.03
TSPAN3-205ENST00000558745 WDR72Q3MJ13 1102 aa14.85□□□□□ -0.03
TSPAN3-205ENST00000558745 SPOPLQ6IQ16 392 aa14.85□□□□□ -0.03
TSPAN3-205ENST00000558745 ELMSAN1Q6PJG2 1045 aa14.85□□□□□ -0.03
TSPAN3-205ENST00000558745 TCEAL8Q8IYN2 117 aa14.85□□□□□ -0.03
TSPAN3-205ENST00000558745 KBTBD7Q8WVZ9 684 aa14.85□□□□□ -0.03
TSPAN3-205ENST00000558745 DHTKD1Q96HY7 919 aaPredicted RBP14.85□□□□□ -0.03
TSPAN3-205ENST00000558745 NECTIN4Q96NY8 510 aa14.85□□□□□ -0.03
TSPAN3-205ENST00000558745 MRPL45Q9BRJ2 306 aaKnown RBP14.85□□□□□ -0.03
TSPAN3-205ENST00000558745 PI4K2AQ9BTU6 479 aa14.85□□□□□ -0.03
TSPAN3-205ENST00000558745 XYLT2Q9H1B5 865 aa14.85□□□□□ -0.03
TSPAN3-205ENST00000558745 WDR6Q9NNW5 1121 aaKnown RBP14.85□□□□□ -0.03
TSPAN3-205ENST00000558745 DDX43Q9NXZ2 648 aaKnown RBP14.85□□□□□ -0.03
TSPAN3-205ENST00000558745 DNMT3BQ9UBC3 853 aaKnown RBP14.85□□□□□ -0.03
TSPAN3-205ENST00000558745 NXF1Q9UBU9 619 aaKnown RBP14.85□□□□□ -0.03
TSPAN3-205ENST00000558745 DSEQ9UL01 958 aa14.85□□□□□ -0.03
TSPAN3-205ENST00000558745 NME7Q9Y5B8 376 aa14.85□□□□□ -0.03
TSPAN3-205ENST00000558745 NRG2O14511 850 aaPredicted RBP14.84□□□□□ -0.03
TSPAN3-205ENST00000558745 MAPK13O15264 365 aa14.84□□□□□ -0.03
TSPAN3-205ENST00000558745 ATP2C2O75185 946 aa14.84□□□□□ -0.03
TSPAN3-205ENST00000558745 CLSTN1O94985 981 aa14.84□□□□□ -0.03
TSPAN3-205ENST00000558745 KRT13P13646 458 aa14.84□□□□□ -0.03
TSPAN3-205ENST00000558745 CDH8P55286 799 aa14.84□□□□□ -0.03
TSPAN3-205ENST00000558745 FKBP3Q00688 224 aaKnown RBP14.84□□□□□ -0.03
TSPAN3-205ENST00000558745 TWF1Q12792 350 aa14.84□□□□□ -0.03
TSPAN3-205ENST00000558745 NCOA4Q13772 614 aa14.84□□□□□ -0.03
TSPAN3-205ENST00000558745 ZACNQ401N2 412 aa14.84□□□□□ -0.03
TSPAN3-205ENST00000558745 TPGS2Q68CL5 300 aa14.84□□□□□ -0.03
TSPAN3-205ENST00000558745 CCDC149Q6ZUS6 474 aa14.84□□□□□ -0.03
TSPAN3-205ENST00000558745 INTS8Q75QN2 995 aaKnown RBP14.84□□□□□ -0.03
TSPAN3-205ENST00000558745 LIMS2Q7Z4I7 341 aa14.84□□□□□ -0.03
TSPAN3-205ENST00000558745 RNF135Q8IUD6 432 aa14.84□□□□□ -0.03
TSPAN3-205ENST00000558745 ZC3H3Q8IXZ2 948 aaKnown RBP14.84□□□□□ -0.03
TSPAN3-205ENST00000558745 ADGRF2Q8IZF7 708 aa14.84□□□□□ -0.03
TSPAN3-205ENST00000558745 TOP6BLQ8N6T0 577 aa14.84□□□□□ -0.03
TSPAN3-205ENST00000558745 MED15Q96RN5 788 aa14.84□□□□□ -0.03
TSPAN3-205ENST00000558745 CEP72Q9P209 647 aa14.84□□□□□ -0.03
TSPAN3-205ENST00000558745 INSL5Q9Y5Q6 135 aa14.84□□□□□ -0.03
TSPAN3-205ENST00000558745 TSC2P49815 1807 aa14.84□□□□□ -0.03
TSPAN3-205ENST00000558745 ARHGEF37A1IGU5 675 aa14.83□□□□□ -0.04
TSPAN3-205ENST00000558745 MYBPHLA2RUH7 354 aa14.83□□□□□ -0.04
TSPAN3-205ENST00000558745 GABRDO14764 452 aa14.83□□□□□ -0.04
TSPAN3-205ENST00000558745 PSMA7O14818 248 aa14.83□□□□□ -0.04
TSPAN3-205ENST00000558745 PAPLNO95428 1278 aa14.83□□□□□ -0.04
TSPAN3-205ENST00000558745 HLA-DRAP01903 254 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms