RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 CPSF3Q9UKF6 684 aaKnown RBP8.83□□□□□ -1
SPG11-209ENST00000558253 SCAF8Q9UPN6 1271 aaKnown RBP8.83□□□□□ -1
SPG11-209ENST00000558253 DRG1Q9Y295 367 aaKnown RBP8.83□□□□□ -1
SPG11-209ENST00000558253 ATP8A1Q9Y2Q0 1164 aa8.83□□□□□ -1
SPG11-209ENST00000558253 NR2E1Q9Y466 385 aa8.83□□□□□ -1
SPG11-209ENST00000558253 MROH7Q68CQ1 1323 aa8.82□□□□□ -1
SPG11-209ENST00000558253 TMEM191CA6NGB0 347 aa8.82□□□□□ -1
SPG11-209ENST00000558253 MYO1CO00159 1063 aa8.82□□□□□ -1
SPG11-209ENST00000558253 CLGNO14967 610 aa8.82□□□□□ -1
SPG11-209ENST00000558253 RGS16O15492 202 aaPredicted RBP8.82□□□□□ -1
SPG11-209ENST00000558253 TRAPPC3O43617 180 aa8.82□□□□□ -1
SPG11-209ENST00000558253 SORBS3O60504 671 aa8.82□□□□□ -1
SPG11-209ENST00000558253 PRKCBP05771 671 aa8.82□□□□□ -1
SPG11-209ENST00000558253 TMEM191BP0C7N4 346 aa8.82□□□□□ -1
SPG11-209ENST00000558253 PROZP22891 400 aa8.82□□□□□ -1
SPG11-209ENST00000558253 RPL21P46778 160 aaKnown RBP8.82□□□□□ -1
SPG11-209ENST00000558253 CCNA1P78396 465 aa8.82□□□□□ -1
SPG11-209ENST00000558253 NR1H3Q13133 447 aa8.82□□□□□ -1
SPG11-209ENST00000558253 LAMC2Q13753 1193 aa8.82□□□□□ -1
SPG11-209ENST00000558253 TTLL4Q14679 1199 aa8.82□□□□□ -1
SPG11-209ENST00000558253 PTPROQ16827 1216 aa8.82□□□□□ -1
SPG11-209ENST00000558253 KCTD16Q68DU8 428 aa8.82□□□□□ -1
SPG11-209ENST00000558253 TTC27Q6P3X3 843 aa8.82□□□□□ -1
SPG11-209ENST00000558253 TMEM270Q6UE05 265 aa8.82□□□□□ -1
SPG11-209ENST00000558253 GADL1Q6ZQY3 521 aa8.82□□□□□ -1
SPG11-209ENST00000558253 USP50Q70EL3 339 aaPredicted RBP8.82□□□□□ -1
SPG11-209ENST00000558253 ZNF365Q70YC5 407 aa8.82□□□□□ -1
SPG11-209ENST00000558253 POLNQ7Z5Q5 900 aa8.82□□□□□ -1
SPG11-209ENST00000558253 RPAINQ86UA6 219 aa8.82□□□□□ -1
SPG11-209ENST00000558253 NLRP14Q86W24 1093 aa8.82□□□□□ -1
SPG11-209ENST00000558253 FNIP1Q8TF40 1166 aa8.82□□□□□ -1
SPG11-209ENST00000558253 ZNF606Q8WXB4 792 aa8.82□□□□□ -1
SPG11-209ENST00000558253 CPA5Q8WXQ8 436 aa8.82□□□□□ -1
SPG11-209ENST00000558253 CYFIP2Q96F07 1278 aa8.82□□□□□ -1
SPG11-209ENST00000558253 SCLT1Q96NL6 688 aa8.82□□□□□ -1
SPG11-209ENST00000558253 CCT8L2Q96SF2 557 aa8.82□□□□□ -1
SPG11-209ENST00000558253 MMP19Q99542 508 aa8.82□□□□□ -1
SPG11-209ENST00000558253 NCAPGQ9BPX3 1015 aa8.82□□□□□ -1
SPG11-209ENST00000558253 PI4K2AQ9BTU6 479 aa8.82□□□□□ -1
SPG11-209ENST00000558253 DCLK3Q9C098 648 aa8.82□□□□□ -1
SPG11-209ENST00000558253 PHACTR1Q9C0D0 580 aa8.82□□□□□ -1
SPG11-209ENST00000558253 DNAI2Q9GZS0 605 aa8.82□□□□□ -1
SPG11-209ENST00000558253 ASCC2Q9H1I8 757 aaPredicted RBP8.82□□□□□ -1
SPG11-209ENST00000558253 CENPHQ9H3R5 247 aa8.82□□□□□ -1
SPG11-209ENST00000558253 CYP3A43Q9HB55 503 aa8.82□□□□□ -1
SPG11-209ENST00000558253 PTPRHQ9HD43 1115 aa8.82□□□□□ -1
SPG11-209ENST00000558253 ERVK-5Q9HDB9 667 aa8.82□□□□□ -1
SPG11-209ENST00000558253 PRMT7Q9NVM4 692 aaPredicted RBP8.82□□□□□ -1
SPG11-209ENST00000558253 ERAP1Q9NZ08 941 aa8.82□□□□□ -1
SPG11-209ENST00000558253 ANKFY1Q9P2R3 1169 aa8.82□□□□□ -1
SPG11-209ENST00000558253 SLC12A6Q9UHW9 1150 aa8.82□□□□□ -1
SPG11-209ENST00000558253 NOVA2Q9UNW9 492 aaKnown RBP8.82□□□□□ -1
SPG11-209ENST00000558253 TNFSF13BQ9Y275 285 aa8.82□□□□□ -1
SPG11-209ENST00000558253 SLC45A1Q9Y2W3 748 aa8.82□□□□□ -1
SPG11-209ENST00000558253 COL1A2P08123 1366 aa8.82□□□□□ -1
SPG11-209ENST00000558253 A0A0G2JMZ2 1700 aa8.81□□□□□ -1
SPG11-209ENST00000558253 RASGRF2O14827 1237 aa8.81□□□□□ -1
SPG11-209ENST00000558253 TLR3O15455 904 aaKnown RBP8.81□□□□□ -1
SPG11-209ENST00000558253 RIPK2O43353 540 aa8.81□□□□□ -1
SPG11-209ENST00000558253 FAM189A1O60320 539 aa8.81□□□□□ -1
SPG11-209ENST00000558253 STAU1O95793 577 aaKnown RBP8.81□□□□□ -1
SPG11-209ENST00000558253 KRT7P08729 469 aa8.81□□□□□ -1
SPG11-209ENST00000558253 HOXC6P09630 235 aa8.81□□□□□ -1
SPG11-209ENST00000558253 MCF2P10911 925 aa8.81□□□□□ -1
SPG11-209ENST00000558253 ATF2P15336 505 aa8.81□□□□□ -1
SPG11-209ENST00000558253 TMOD1P28289 359 aa8.81□□□□□ -1
SPG11-209ENST00000558253 FLT3P36888 993 aa8.81□□□□□ -1
SPG11-209ENST00000558253 PHKA2P46019 1235 aa8.81□□□□□ -1
SPG11-209ENST00000558253 CCT5P48643 541 aa8.81□□□□□ -1
SPG11-209ENST00000558253 MARCKSL1P49006 195 aa8.81□□□□□ -1
SPG11-209ENST00000558253 ATP1A2P50993 1020 aa8.81□□□□□ -1
SPG11-209ENST00000558253 SNX16P57768 344 aa8.81□□□□□ -1
SPG11-209ENST00000558253 MAGOHP61326 146 aaKnown RBP8.81□□□□□ -1
SPG11-209ENST00000558253 KRT17Q04695 432 aa8.81□□□□□ -1
SPG11-209ENST00000558253 KLF1Q13351 362 aaPredicted RBP8.81□□□□□ -1
SPG11-209ENST00000558253 PDCLQ13371 301 aa8.81□□□□□ -1
SPG11-209ENST00000558253 PCBP1Q15365 356 aaKnown RBP eCLIP8.81□□□□□ -1
SPG11-209ENST00000558253 ZNF568Q3ZCX4 644 aa8.81□□□□□ -1
SPG11-209ENST00000558253 TNFAIP8L3Q5GJ75 292 aa8.81□□□□□ -1
SPG11-209ENST00000558253 TREML2Q5T2D2 321 aa8.81□□□□□ -1
SPG11-209ENST00000558253 ATF7IP2Q5U623 682 aa8.81□□□□□ -1
SPG11-209ENST00000558253 PRAMEF18Q5VWM3 479 aa8.81□□□□□ -1
SPG11-209ENST00000558253 CCDC62Q6P9F0 684 aa8.81□□□□□ -1
SPG11-209ENST00000558253 BLOC1S3Q6QNY0 202 aa8.81□□□□□ -1
SPG11-209ENST00000558253 ADAT2Q7Z6V5 191 aaKnown RBP8.81□□□□□ -1
SPG11-209ENST00000558253 PCGF5Q86SE9 256 aa8.81□□□□□ -1
SPG11-209ENST00000558253 CNPY4Q8N129 248 aa8.81□□□□□ -1
SPG11-209ENST00000558253 RIBC1Q8N443 379 aaPredicted RBP8.81□□□□□ -1
SPG11-209ENST00000558253 SH2D3CQ8N5H7 860 aa8.81□□□□□ -1
SPG11-209ENST00000558253 RNF149Q8NC42 400 aa8.81□□□□□ -1
SPG11-209ENST00000558253 EMID1Q96A84 441 aaPredicted RBP8.81□□□□□ -1
SPG11-209ENST00000558253 TTC25Q96NG3 672 aa8.81□□□□□ -1
SPG11-209ENST00000558253 OSBPL8Q9BZF1 889 aa8.81□□□□□ -1
SPG11-209ENST00000558253 TRIM31Q9BZY9 425 aa8.81□□□□□ -1
SPG11-209ENST00000558253 ASB7Q9H672 318 aa8.81□□□□□ -1
SPG11-209ENST00000558253 CCDC134Q9H6E4 229 aa8.81□□□□□ -1
SPG11-209ENST00000558253 VRTNQ9H8Y1 702 aa8.81□□□□□ -1
SPG11-209ENST00000558253 APOBEC3GQ9HC16 384 aaKnown RBP8.81□□□□□ -1
SPG11-209ENST00000558253 BCCIPQ9P287 314 aaKnown RBP eCLIP8.81□□□□□ -1
SPG11-209ENST00000558253 ASIC3Q9UHC3 531 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms