RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 PTPRDP23468 1912 aa17.96■□□□□ 0.47
PBX4-202ENST00000557978 NCOR1O75376 2440 aa17.96■□□□□ 0.47
PBX4-202ENST00000557978 HLA-DRAP01903 254 aa17.96■□□□□ 0.47
PBX4-202ENST00000557978 CPB1P15086 417 aa17.96■□□□□ 0.47
PBX4-202ENST00000557978 ARPP19P56211 112 aa17.96■□□□□ 0.47
PBX4-202ENST00000557978 RTL10Q7L3V2 364 aa17.96■□□□□ 0.47
PBX4-202ENST00000557978 FAM114A1Q8IWE2 563 aa17.96■□□□□ 0.47
PBX4-202ENST00000557978 PDCL2Q8N4E4 241 aa17.96■□□□□ 0.47
PBX4-202ENST00000557978 KREMEN2Q8NCW0 462 aa17.96■□□□□ 0.47
PBX4-202ENST00000557978 SLC35C1Q96A29 364 aa17.96■□□□□ 0.47
PBX4-202ENST00000557978 XYLT2Q9H1B5 865 aa17.96■□□□□ 0.47
PBX4-202ENST00000557978 MAFFQ9ULX9 164 aa17.96■□□□□ 0.47
PBX4-202ENST00000557978 L1RE1Q9UN81 338 aa17.96■□□□□ 0.47
PBX4-202ENST00000557978 FAM50BQ9Y247 325 aa17.96■□□□□ 0.47
PBX4-202ENST00000557978 ADAM12O43184 909 aa17.95■□□□□ 0.46
PBX4-202ENST00000557978 ABLIM3O94929 683 aa17.95■□□□□ 0.46
PBX4-202ENST00000557978 ATF2P15336 505 aa17.95■□□□□ 0.46
PBX4-202ENST00000557978 ELF1P32519 619 aa17.95■□□□□ 0.46
PBX4-202ENST00000557978 TFF2Q03403 129 aa17.95■□□□□ 0.46
PBX4-202ENST00000557978 ITIH3Q06033 890 aa17.95■□□□□ 0.46
PBX4-202ENST00000557978 SOWAHAQ2M3V2 549 aa17.95■□□□□ 0.46
PBX4-202ENST00000557978 UVSSAQ2YD98 709 aa17.95■□□□□ 0.46
PBX4-202ENST00000557978 LIN9Q5TKA1 542 aa17.95■□□□□ 0.46
PBX4-202ENST00000557978 CES5AQ6NT32 575 aa17.95■□□□□ 0.46
PBX4-202ENST00000557978 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.95■□□□□ 0.46
PBX4-202ENST00000557978 ADGRF2Q8IZF7 708 aa17.95■□□□□ 0.46
PBX4-202ENST00000557978 FBXL13Q8NEE6 735 aa17.95■□□□□ 0.46
PBX4-202ENST00000557978 MED15Q96RN5 788 aa17.95■□□□□ 0.46
PBX4-202ENST00000557978 ACBD6Q9BR61 282 aa17.95■□□□□ 0.46
PBX4-202ENST00000557978 THAP9Q9H5L6 903 aa17.95■□□□□ 0.46
PBX4-202ENST00000557978 SFXN1Q9H9B4 322 aa17.95■□□□□ 0.46
PBX4-202ENST00000557978 NXF1Q9UBU9 619 aaKnown RBP17.95■□□□□ 0.46
PBX4-202ENST00000557978 FBXW11Q9UKB1 542 aa17.95■□□□□ 0.46
PBX4-202ENST00000557978 WDR27A2RRH5 827 aa17.94■□□□□ 0.46
PBX4-202ENST00000557978 N4BP1O75113 896 aaKnown RBP17.94■□□□□ 0.46
PBX4-202ENST00000557978 TACC1O75410 805 aa17.94■□□□□ 0.46
PBX4-202ENST00000557978 ASS1P00966 412 aaKnown RBP17.94■□□□□ 0.46
PBX4-202ENST00000557978 SPATA31D3P0C874 917 aa17.94■□□□□ 0.46
PBX4-202ENST00000557978 CETN1Q12798 172 aa17.94■□□□□ 0.46
PBX4-202ENST00000557978 SMARCB1Q12824 385 aa17.94■□□□□ 0.46
PBX4-202ENST00000557978 GPR17Q13304 367 aa17.94■□□□□ 0.46
PBX4-202ENST00000557978 SPATA31D4Q6ZUB0 917 aa17.94■□□□□ 0.46
PBX4-202ENST00000557978 CCDC149Q6ZUS6 474 aa17.94■□□□□ 0.46
PBX4-202ENST00000557978 LIMS2Q7Z4I7 341 aa17.94■□□□□ 0.46
PBX4-202ENST00000557978 CREBRFQ8IUR6 639 aa17.94■□□□□ 0.46
PBX4-202ENST00000557978 TRIM59Q8IWR1 403 aa17.94■□□□□ 0.46
PBX4-202ENST00000557978 SMRP1Q8NCR6 262 aa17.94■□□□□ 0.46
PBX4-202ENST00000557978 ENOX1Q8TC92 643 aaKnown RBP17.94■□□□□ 0.46
PBX4-202ENST00000557978 TAS1R2Q8TE23 839 aa17.94■□□□□ 0.46
PBX4-202ENST00000557978 DDX43Q9NXZ2 648 aaKnown RBP17.94■□□□□ 0.46
PBX4-202ENST00000557978 AFF4Q9UHB7 1163 aaKnown RBP17.94■□□□□ 0.46
PBX4-202ENST00000557978 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.94■□□□□ 0.46
PBX4-202ENST00000557978 A0A0C4DFX4 3053 aa17.93■□□□□ 0.46
PBX4-202ENST00000557978 GABRDO14764 452 aa17.93■□□□□ 0.46
PBX4-202ENST00000557978 PMM2O15305 246 aa17.93■□□□□ 0.46
PBX4-202ENST00000557978 P4HA2O15460 535 aa17.93■□□□□ 0.46
PBX4-202ENST00000557978 PCSK1P29120 753 aa17.93■□□□□ 0.46
PBX4-202ENST00000557978 FMO5P49326 533 aa17.93■□□□□ 0.46
PBX4-202ENST00000557978 TSPY1Q01534 308 aa17.93■□□□□ 0.46
PBX4-202ENST00000557978 TYRO3Q06418 890 aa17.93■□□□□ 0.46
PBX4-202ENST00000557978 CLUL1Q15846 466 aa17.93■□□□□ 0.46
PBX4-202ENST00000557978 SYCE2Q6PIF2 218 aa17.93■□□□□ 0.46
PBX4-202ENST00000557978 DCP1BQ8IZD4 617 aaKnown RBP17.93■□□□□ 0.46
PBX4-202ENST00000557978 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.93■□□□□ 0.46
PBX4-202ENST00000557978 FAXDC2Q96IV6 333 aa17.93■□□□□ 0.46
PBX4-202ENST00000557978 CNOT6LQ96LI5 555 aaKnown RBP17.93■□□□□ 0.46
PBX4-202ENST00000557978 NAT10Q9H0A0 1025 aaKnown RBP17.93■□□□□ 0.46
PBX4-202ENST00000557978 RAB20Q9NX57 234 aa17.93■□□□□ 0.46
PBX4-202ENST00000557978 ZDHHC7Q9NXF8 308 aa17.93■□□□□ 0.46
PBX4-202ENST00000557978 MAGEC2Q9UBF1 373 aaPredicted RBP17.93■□□□□ 0.46
PBX4-202ENST00000557978 COQ4Q9Y3A0 265 aa17.93■□□□□ 0.46
PBX4-202ENST00000557978 DENND4AQ7Z401 1863 aa17.93■□□□□ 0.46
PBX4-202ENST00000557978 CCDC195A0A1B0GUA6 201 aa17.92■□□□□ 0.46
PBX4-202ENST00000557978 ZMYND10O75800 440 aa17.92■□□□□ 0.46
PBX4-202ENST00000557978 WARSP23381 471 aaKnown RBP17.92■□□□□ 0.46
PBX4-202ENST00000557978 KCNH2Q12809 1159 aa17.92■□□□□ 0.46
PBX4-202ENST00000557978 SMAD4Q13485 552 aaKnown RBP17.92■□□□□ 0.46
PBX4-202ENST00000557978 CBWD6Q4V339 395 aa17.92■□□□□ 0.46
PBX4-202ENST00000557978 WDR44Q5JSH3 913 aa17.92■□□□□ 0.46
PBX4-202ENST00000557978 CBWD3Q5JTY5 395 aa17.92■□□□□ 0.46
PBX4-202ENST00000557978 CBWD5Q5RIA9 395 aa17.92■□□□□ 0.46
PBX4-202ENST00000557978 PPM1LQ5SGD2 360 aa17.92■□□□□ 0.46
PBX4-202ENST00000557978 PTCRAQ6ISU1 281 aaPredicted RBP17.92■□□□□ 0.46
PBX4-202ENST00000557978 CYP26C1Q6V0L0 522 aa17.92■□□□□ 0.46
PBX4-202ENST00000557978 CMASQ8NFW8 434 aaPredicted RBP17.92■□□□□ 0.46
PBX4-202ENST00000557978 ASB2Q96Q27 587 aa17.92■□□□□ 0.46
PBX4-202ENST00000557978 ZCWPW1Q9H0M4 648 aa17.92■□□□□ 0.46
PBX4-202ENST00000557978 ADAM7Q9H2U9 754 aa17.92■□□□□ 0.46
PBX4-202ENST00000557978 SNX25Q9H3E2 840 aa17.92■□□□□ 0.46
PBX4-202ENST00000557978 MBTPS2O43462 519 aa17.91■□□□□ 0.46
PBX4-202ENST00000557978 AFPP02771 609 aaKnown RBP17.91■□□□□ 0.46
PBX4-202ENST00000557978 C8AP07357 584 aa17.91■□□□□ 0.46
PBX4-202ENST00000557978 HNRNPA1P09651 372 aaKnown RBP eCLIP17.91■□□□□ 0.46
PBX4-202ENST00000557978 HOXA9P31269 272 aa17.91■□□□□ 0.46
PBX4-202ENST00000557978 GNL1P36915 607 aaPredicted RBP17.91■□□□□ 0.46
PBX4-202ENST00000557978 NOP14P78316 857 aaKnown RBP17.91■□□□□ 0.46
PBX4-202ENST00000557978 ADCY1Q08828 1119 aa17.91■□□□□ 0.46
PBX4-202ENST00000557978 RARS2Q5T160 578 aaKnown RBP17.91■□□□□ 0.46
PBX4-202ENST00000557978 TCEAL8Q8IYN2 117 aa17.91■□□□□ 0.46
PBX4-202ENST00000557978 OR6B3Q8NGW1 331 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms