RNA–Protein interactions for RNA: ENST00000557680.1

PNN-206, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3

Gene PNN, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-206ENST00000557680 GJD2Q9UKL4 321 aa5.19□□□□□ -1.58
PNN-206ENST00000557680 RBM8AQ9Y5S9 174 aaKnown RBP5.19□□□□□ -1.58
PNN-206ENST00000557680 TCRBV7S2A1N4TA0A589 114 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 GOLGA6L3A6NEY3 463 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 PRSS47A8MTI9 375 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 PATE3B3GLJ2 98 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 EIF3FO00303 357 aaPredicted RBP5.18□□□□□ -1.58
PNN-206ENST00000557680 ZNF623O75123 536 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 TNFRSF6BO95407 300 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 ANXA2P07355 339 aaKnown RBP5.18□□□□□ -1.58
PNN-206ENST00000557680 POLD1P28340 1107 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 KIR2DL3P43628 341 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 GEMIN4P57678 1058 aaKnown RBP5.18□□□□□ -1.58
PNN-206ENST00000557680 NOMO3P69849 1222 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 SLC13A2Q13183 592 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 SPARCL1Q14515 664 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 TBR1Q16650 682 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 ARHGAP15Q53QZ3 475 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 CCDC93Q567U6 631 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 SPDYAQ5MJ70 313 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 USP49Q70CQ1 688 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 PLXDC1Q8IUK5 500 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 OR6B3Q8NGW1 331 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 STT3BQ8TCJ2 826 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 TBATAQ96M53 351 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 WWC2-AS2Q96NR7 200 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 TMX4Q9H1E5 349 aaPredicted RBP5.18□□□□□ -1.58
PNN-206ENST00000557680 MEGF9Q9H1U4 602 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 TBC1D23Q9NUY8 699 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 ADAM29Q9UKF5 820 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 AGAP1Q9UPQ3 857 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 CEP83Q9Y592 693 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 CTDP1Q9Y5B0 961 aaPredicted RBP5.18□□□□□ -1.58
PNN-206ENST00000557680 PNPLA7Q6ZV29 1317 aa5.18□□□□□ -1.58
PNN-206ENST00000557680 RRN3P2A6NIE6 340 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 OVOL3O00110 214 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 DAPK3O43293 454 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 SKAP2O75563 359 aaPredicted RBP5.17□□□□□ -1.58
PNN-206ENST00000557680 TOX4O94842 621 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 GASTP01350 101 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 ZNF888P0CJ79 500 aaPredicted RBP5.17□□□□□ -1.58
PNN-206ENST00000557680 MYL4P12829 197 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 GABRB3P28472 473 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 ETV4P43268 484 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 MRE11P49959 708 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 WNT3AP56704 352 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 ATP2C1P98194 919 aaPredicted RBP5.17□□□□□ -1.58
PNN-206ENST00000557680 KIF22Q14807 665 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 R3HDM1Q15032 1099 aaKnown RBP5.17□□□□□ -1.58
PNN-206ENST00000557680 RAB30Q15771 203 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 ZDHHC24Q6UX98 284 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 CATSPERGQ6ZRH7 1159 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 RALYLQ86SE5 291 aaKnown RBP5.17□□□□□ -1.58
PNN-206ENST00000557680 VGLL2Q8N8G2 317 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 IL17RDQ8NFM7 739 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 TRAPPC12Q8WVT3 735 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 CASKIN2Q8WXE0 1202 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 ASB12Q8WXK4 309 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 IQCDQ96DY2 449 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 LRRC46Q96FV0 321 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 ENKD1Q9H0I2 346 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 C11orf54Q9H0W9 315 aaPredicted RBP5.17□□□□□ -1.58
PNN-206ENST00000557680 ZHX3Q9H4I2 956 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 CNNM1Q9NRU3 951 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.17□□□□□ -1.58
PNN-206ENST00000557680 TMEM140Q9NV12 185 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 DACT1Q9NYF0 836 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 PDP2Q9P2J9 529 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 NRBP1Q9UHY1 535 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 FBXO10Q9UK96 956 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 ITGB1BP2Q9UKP3 347 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 CRYL1Q9Y2S2 319 aa5.17□□□□□ -1.58
PNN-206ENST00000557680 hCG_1984214I3L0E3 225 aa5.16□□□□□ -1.58
PNN-206ENST00000557680 PYCARD-AS1I3L0S3 204 aa5.16□□□□□ -1.58
PNN-206ENST00000557680 J3KRW8 73 aa5.16□□□□□ -1.58
PNN-206ENST00000557680 SYT5O00445 386 aa5.16□□□□□ -1.58
PNN-206ENST00000557680 TBC1D4O60343 1298 aa5.16□□□□□ -1.58
PNN-206ENST00000557680 HMGCRP04035 888 aa5.16□□□□□ -1.58
PNN-206ENST00000557680 GJB1P08034 283 aa5.16□□□□□ -1.58
PNN-206ENST00000557680 PNLIPRP1P54315 467 aa5.16□□□□□ -1.58
PNN-206ENST00000557680 ARL4CP56559 192 aa5.16□□□□□ -1.58
PNN-206ENST00000557680 FOXO1Q12778 655 aa5.16□□□□□ -1.58
PNN-206ENST00000557680 DUSP8Q13202 625 aa5.16□□□□□ -1.58
PNN-206ENST00000557680 G3BP1Q13283 466 aaKnown RBP eCLIP5.16□□□□□ -1.58
PNN-206ENST00000557680 DCAF12L1Q5VU92 463 aa5.16□□□□□ -1.58
PNN-206ENST00000557680 ANKS6Q68DC2 871 aa5.16□□□□□ -1.58
PNN-206ENST00000557680 ZNF783Q6ZMS7 281 aa5.16□□□□□ -1.58
PNN-206ENST00000557680 ANKRD18AQ8IVF6 992 aa5.16□□□□□ -1.58
PNN-206ENST00000557680 SIMC1Q8NDZ2 872 aa5.16□□□□□ -1.58
PNN-206ENST00000557680 PPHLN1Q8NEY8 458 aaKnown RBP5.16□□□□□ -1.58
PNN-206ENST00000557680 CYP2W1Q8TAV3 490 aa5.16□□□□□ -1.58
PNN-206ENST00000557680 Q8TCH9 128 aa5.16□□□□□ -1.58
PNN-206ENST00000557680 CFHR4Q92496 578 aa5.16□□□□□ -1.58
PNN-206ENST00000557680 GFM2Q969S9 779 aaKnown RBP5.16□□□□□ -1.58
PNN-206ENST00000557680 SKA1Q96BD8 255 aa5.16□□□□□ -1.58
PNN-206ENST00000557680 NDC1Q9BTX1 674 aa5.16□□□□□ -1.58
PNN-206ENST00000557680 SIDT1Q9NXL6 827 aaKnown RBP5.16□□□□□ -1.58
PNN-206ENST00000557680 IFT80Q9P2H3 777 aaPredicted RBP5.16□□□□□ -1.58
PNN-206ENST00000557680 SWAP70Q9UH65 585 aa5.16□□□□□ -1.58
PNN-206ENST00000557680 VWA7Q9Y334 891 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms