RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 ZSWIM4Q9H7M6 989 aa6.62□□□□□ -1.35
CPSF2-205ENST00000556622 GINM1Q9NU53 330 aa6.62□□□□□ -1.35
CPSF2-205ENST00000556622 GOLGA6AQ9NYA3 693 aa6.62□□□□□ -1.35
CPSF2-205ENST00000556622 AIPL1Q9NZN9 384 aa6.62□□□□□ -1.35
CPSF2-205ENST00000556622 TMOD4Q9NZQ9 345 aa6.62□□□□□ -1.35
CPSF2-205ENST00000556622 NYAP2Q9P242 653 aa6.62□□□□□ -1.35
CPSF2-205ENST00000556622 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.62□□□□□ -1.35
CPSF2-205ENST00000556622 REV1Q9UBZ9 1251 aa6.62□□□□□ -1.35
CPSF2-205ENST00000556622 MYH1P12882 1939 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 BAZ2AQ9UIF9 1905 aaKnown RBP6.61□□□□□ -1.35
CPSF2-205ENST00000556622 A0A0A6YYK5 440 aaPredicted RBP6.61□□□□□ -1.35
CPSF2-205ENST00000556622 GOLGA6L10A0A0M3HER8 536 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 ERICH4A6NGS2 130 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 CCDC85CA6NKD9 419 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 C19orf81C9J6K1 198 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 CYTH3O43739 400 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 TLR2O60603 784 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 TBCAO75347 108 aaKnown RBP6.61□□□□□ -1.35
CPSF2-205ENST00000556622 SEC31AO94979 1220 aaKnown RBP6.61□□□□□ -1.35
CPSF2-205ENST00000556622 GH2P01242 217 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 CYP2D6P10635 497 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 FERP16591 822 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 SCP2P22307 547 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 KIR3DL1P43629 444 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 YARSP54577 528 aaKnown RBP6.61□□□□□ -1.35
CPSF2-205ENST00000556622 HNRNPH2P55795 449 aaKnown RBP6.61□□□□□ -1.35
CPSF2-205ENST00000556622 BACE1P56817 501 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 HERVK_113P62684 666 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 VSNL1P62760 191 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 KLHL30Q0D2K2 578 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 ADAM9Q13443 819 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 KIF22Q14807 665 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 NAB2Q15742 525 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 PKN2Q16513 984 aaKnown RBP6.61□□□□□ -1.35
CPSF2-205ENST00000556622 ASIC2Q16515 512 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 NFIL3Q16649 462 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 Q4G0T1 1027 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 HERC4Q5GLZ8 1057 aaPredicted RBP6.61□□□□□ -1.35
CPSF2-205ENST00000556622 MIIPQ5JXC2 388 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 SFRP5Q5T4F7 317 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 TATDN1Q6P1N9 297 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 PDXDC1Q6P996 788 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 WDR59Q6PJI9 974 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 EFCAB13Q8IY85 973 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 SPATA4Q8NEY3 305 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 NEK9Q8TD19 979 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 MORC4Q8TE76 937 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 CYB5D2Q8WUJ1 264 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 DYNLL2Q96FJ2 89 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 CEP95Q96GE4 821 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 PIGSQ96S52 555 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 OSBPL9Q96SU4 736 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 MIPEPQ99797 713 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 MCOLN1Q9GZU1 580 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 STMN4Q9H169 189 aaPredicted RBP6.61□□□□□ -1.35
CPSF2-205ENST00000556622 TMEM60Q9H2L4 133 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 VAT1LQ9HCJ6 419 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 ZCCHC17Q9NP64 241 aaKnown RBP6.61□□□□□ -1.35
CPSF2-205ENST00000556622 SLC39A2Q9NP94 309 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 ARMCX3Q9UH62 379 aaPredicted RBP6.61□□□□□ -1.35
CPSF2-205ENST00000556622 TRAF3IP3Q9Y228 551 aa6.61□□□□□ -1.35
CPSF2-205ENST00000556622 COL2A1P02458 1487 aaPredicted RBP6.6□□□□□ -1.35
CPSF2-205ENST00000556622 NAV1Q8NEY1 1877 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 ATXN2Q99700 1313 aaKnown RBP6.6□□□□□ -1.35
CPSF2-205ENST00000556622 A0A0G2JLL6 359 aaPredicted RBP6.6□□□□□ -1.35
CPSF2-205ENST00000556622 MACROD2A1Z1Q3 448 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 TRIM49BA6NDI0 452 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 SLC22A31A6NKX4 558 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 UPK3BL1B0FP48 263 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 HMGB1P1B2RPK0 211 aaPredicted RBP6.6□□□□□ -1.35
CPSF2-205ENST00000556622 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.6□□□□□ -1.35
CPSF2-205ENST00000556622 UPK3BL2E5RIL1 263 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 TULP2O00295 520 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 EIF3DO15371 548 aaKnown RBP eCLIP6.6□□□□□ -1.35
CPSF2-205ENST00000556622 ZEB2O60315 1214 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 DNAJA2O60884 412 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 N4BP1O75113 896 aaKnown RBP6.6□□□□□ -1.35
CPSF2-205ENST00000556622 KIAA0754O94854 1291 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 TSPAN15O95858 294 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 AFPP02771 609 aaKnown RBP6.6□□□□□ -1.35
CPSF2-205ENST00000556622 ATP1A1P05023 1023 aaKnown RBP6.6□□□□□ -1.35
CPSF2-205ENST00000556622 CYP2C8P10632 490 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 RPA1P27694 616 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 CASP1P29466 404 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 CLCN7P51798 805 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 HMGCS2P54868 508 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 EIF3BP55884 814 aaKnown RBP6.6□□□□□ -1.35
CPSF2-205ENST00000556622 RACK1P63244 317 aaKnown RBP6.6□□□□□ -1.35
CPSF2-205ENST00000556622 PABPC4Q13310 644 aaKnown RBP eCLIP6.6□□□□□ -1.35
CPSF2-205ENST00000556622 GRB10Q13322 594 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 BIRC3Q13489 604 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 PPP2R5AQ15172 486 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 RPS6KA1Q15418 735 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 KNOP1Q1ED39 458 aaKnown RBP6.6□□□□□ -1.35
CPSF2-205ENST00000556622 FAM83BQ5T0W9 1011 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 PPP1R2P3Q6NXS1 205 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 LRIG3Q6UXM1 1119 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 CEP128Q6ZU80 1094 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 TMEM179Q6ZVK1 233 aa6.6□□□□□ -1.35
CPSF2-205ENST00000556622 PRRT2Q7Z6L0 340 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms