RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 CALCOCO1Q9P1Z2 691 aa19.45■□□□□ 0.7
SDR39U1-220ENST00000556548 ITGA11Q9UKX5 1188 aa19.45■□□□□ 0.7
SDR39U1-220ENST00000556548 CCDC188H7C350 402 aa19.45■□□□□ 0.7
SDR39U1-220ENST00000556548 POLR3GO15318 223 aaPredicted RBP19.45■□□□□ 0.7
SDR39U1-220ENST00000556548 RECQL4O94761 1208 aa19.45■□□□□ 0.7
SDR39U1-220ENST00000556548 CYBAP13498 195 aa19.45■□□□□ 0.7
SDR39U1-220ENST00000556548 ATICP31939 592 aa19.45■□□□□ 0.7
SDR39U1-220ENST00000556548 SSR1P43307 286 aaKnown RBP19.45■□□□□ 0.7
SDR39U1-220ENST00000556548 YARSP54577 528 aaKnown RBP19.45■□□□□ 0.7
SDR39U1-220ENST00000556548 TJP2Q9UDY2 1190 aa19.45■□□□□ 0.7
SDR39U1-220ENST00000556548 TULP2O00295 520 aa19.44■□□□□ 0.7
SDR39U1-220ENST00000556548 GJC1P36383 396 aa19.44■□□□□ 0.7
SDR39U1-220ENST00000556548 RWDD2BP57060 319 aa19.44■□□□□ 0.7
SDR39U1-220ENST00000556548 POU5F1Q01860 360 aaKnown RBP19.44■□□□□ 0.7
SDR39U1-220ENST00000556548 FAM47CQ5HY64 1035 aa19.44■□□□□ 0.7
SDR39U1-220ENST00000556548 PLEKHA7Q6IQ23 1121 aa19.44■□□□□ 0.7
SDR39U1-220ENST00000556548 ZDHHC14Q8IZN3 488 aa19.44■□□□□ 0.7
SDR39U1-220ENST00000556548 VCPIP1Q96JH7 1222 aa19.44■□□□□ 0.7
SDR39U1-220ENST00000556548 SNX27Q96L92 541 aa19.44■□□□□ 0.7
SDR39U1-220ENST00000556548 MRPL47Q9HD33 250 aaKnown RBP19.44■□□□□ 0.7
SDR39U1-220ENST00000556548 PARVAQ9NVD7 372 aa19.44■□□□□ 0.7
SDR39U1-220ENST00000556548 H3BQF6 201 aa19.43■□□□□ 0.7
SDR39U1-220ENST00000556548 CILPO75339 1184 aa19.43■□□□□ 0.7
SDR39U1-220ENST00000556548 FAM153BP0C7A2 387 aa19.43■□□□□ 0.7
SDR39U1-220ENST00000556548 CTNNA2P26232 953 aa19.43■□□□□ 0.7
SDR39U1-220ENST00000556548 NBPF20Q3BBV1 942 aa19.43■□□□□ 0.7
SDR39U1-220ENST00000556548 FAM153CQ494X1 144 aa19.43■□□□□ 0.7
SDR39U1-220ENST00000556548 ERICH1Q86X53 443 aa19.43■□□□□ 0.7
SDR39U1-220ENST00000556548 HEXIM2Q96MH2 286 aaKnown RBP19.43■□□□□ 0.7
SDR39U1-220ENST00000556548 NAP1L3Q99457 506 aaPredicted RBP19.43■□□□□ 0.7
SDR39U1-220ENST00000556548 PARP2Q9UGN5 583 aa19.43■□□□□ 0.7
SDR39U1-220ENST00000556548 FAM153AQ9UHL3 310 aa19.43■□□□□ 0.7
SDR39U1-220ENST00000556548 CYTH4Q9UIA0 394 aa19.43■□□□□ 0.7
SDR39U1-220ENST00000556548 KIF3CO14782 793 aa19.43■□□□□ 0.7
SDR39U1-220ENST00000556548 GNAT1P11488 350 aa19.43■□□□□ 0.7
SDR39U1-220ENST00000556548 P4HA1P13674 534 aa19.43■□□□□ 0.7
SDR39U1-220ENST00000556548 OAS2P29728 719 aaKnown RBP19.43■□□□□ 0.7
SDR39U1-220ENST00000556548 SESTD1Q86VW0 696 aa19.43■□□□□ 0.7
SDR39U1-220ENST00000556548 SMC1BQ8NDV3 1235 aa19.43■□□□□ 0.7
SDR39U1-220ENST00000556548 FEZF2Q8TBJ5 459 aa19.43■□□□□ 0.7
SDR39U1-220ENST00000556548 RUBCNQ92622 972 aa19.43■□□□□ 0.7
SDR39U1-220ENST00000556548 TMEM176AQ96HP8 235 aa19.43■□□□□ 0.7
SDR39U1-220ENST00000556548 MCEEQ96PE7 176 aa19.43■□□□□ 0.7
SDR39U1-220ENST00000556548 CEP83Q9Y592 693 aa19.43■□□□□ 0.7
SDR39U1-220ENST00000556548 GOLGA6L10A0A0M3HER8 536 aa19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 PROSCO94903 275 aa19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 LSM8O95777 96 aaKnown RBP19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 ELNP15502 786 aa19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 NDST1P52848 882 aa19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 FAM193AP78312 1265 aa19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 PTPN11Q06124 597 aaPredicted RBP19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 CACNB2Q08289 660 aaPredicted RBP19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 APBB1IPQ7Z5R6 666 aaPredicted RBP19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 TRIM51Q9BSJ1 452 aa19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 TRIM31Q9BZY9 425 aa19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 TSPYL1Q9H0U9 437 aa19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 HPCAL4Q9UM19 191 aa19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 PCDHGC3Q9UN70 934 aa19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 SNX9Q9Y5X1 595 aa19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 SCINQ9Y6U3 715 aa19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 GOLGA8SH3BPF8 625 aa19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 CTSHP09668 335 aa19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 CRYBB1P53674 252 aaPredicted RBP19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 EPHB4P54760 987 aa19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 GJA9P57773 515 aa19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 TAS2R40P59535 323 aa19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 DNAJC24Q6P3W2 148 aa19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 CD302Q8IX05 232 aa19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 C18orf8Q96DM3 657 aa19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 MTG1Q9BT17 334 aaPredicted RBP19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 VRTNQ9H8Y1 702 aa19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 CITO14578 2027 aa19.42■□□□□ 0.7
SDR39U1-220ENST00000556548 CALB1P05937 261 aa19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 CCND3P30281 292 aaPredicted RBP19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 HLTFQ14527 1009 aaKnown RBP eCLIP19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 GDF6Q6KF10 455 aaPredicted RBP19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 CCDC26Q8TAB7 109 aa19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 UBA3Q8TBC4 463 aa19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 WNT8BQ93098 351 aa19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 PLEKHA5Q9HAU0 1116 aa19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 TRIP11Q15643 1979 aa19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 MED7O43513 233 aa19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 PAEPP09466 180 aa19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 RARBP10826 455 aa19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 TNFRSF8P28908 595 aa19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 MYO1EQ12965 1108 aa19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 PTPN20Q4JDL3 420 aa19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 UBXN11Q5T124 520 aa19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 DCUN1D2Q6PH85 259 aa19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 MAATS1Q7Z4T9 603 aa19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 SLC13A5Q86YT5 568 aaPredicted RBP19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 PRELID2Q8N945 189 aa19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 C12orf29Q8N999 325 aa19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 UBXN6Q9BZV1 441 aa19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 DPH5Q9H2P9 285 aa19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 SLITRK6Q9H5Y7 841 aa19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 CYP3A43Q9HB55 503 aa19.41■□□□□ 0.7
SDR39U1-220ENST00000556548 PIK3R2O00459 728 aa19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 MICAL2O94851 1124 aa19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 TCF4P15884 667 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms