RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 PCDHA2Q9Y5H9 948 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 MYH8P13535 1937 aa5.52□□□□□ -1.53
ATXN3-239ENST00000556315 KDM3AQ9Y4C1 1321 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 SMIM35A0A1B0GVV1 85 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 DENND3A2RUS2 1198 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 C2orf71A6NGG8 1288 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 C9IYK1 514 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 MAFGO15525 162 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 ATP9AO75110 1047 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 CLASP2O75122 1294 aaKnown RBP5.51□□□□□ -1.53
ATXN3-239ENST00000556315 RPS6KA5O75582 802 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 CXCL14O95715 111 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 MED14OSP0DP75 135 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 IBSPP21815 317 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-239ENST00000556315 MARK3P27448 753 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 PPM1AP35813 382 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 ETFBP38117 255 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 TMEM62Q0P6H9 643 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 SMC1AQ14683 1233 aaKnown RBP5.51□□□□□ -1.53
ATXN3-239ENST00000556315 TMEM266Q2M3C6 531 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 KIAA1841Q6NSI8 718 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 ZC3H14Q6PJT7 736 aaKnown RBP5.51□□□□□ -1.53
ATXN3-239ENST00000556315 KCNT2Q6UVM3 1135 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 OTOP3Q7RTS5 596 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 CDH24Q86UP0 819 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 CKAP2LQ8IYA6 745 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 ENAHQ8N8S7 591 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-239ENST00000556315 ABHD4Q8TB40 342 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 BAHD1Q8TBE0 780 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-239ENST00000556315 OTUD7AQ8TE49 926 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-239ENST00000556315 UBXN4Q92575 508 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 DHRS1Q96LJ7 313 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 FAM227BQ96M60 508 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 ZNF558Q96NG5 402 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 PIGSQ96S52 555 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 DIRC2Q96SL1 478 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 ADAM2Q99965 735 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 TMEM117Q9H0C3 514 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 RIOX1Q9H6W3 641 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 ELAC1Q9H777 363 aaKnown RBP5.51□□□□□ -1.53
ATXN3-239ENST00000556315 ERVK-5Q9HDB9 667 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 TMEM161AQ9NX61 479 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 SPG21Q9NZD8 308 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 IGSF9Q9P2J2 1179 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 WNT16Q9UBV4 365 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 CDH22Q9UJ99 828 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 FBXL21Q9UKT6 434 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 NOC2LQ9Y3T9 749 aaKnown RBP5.51□□□□□ -1.53
ATXN3-239ENST00000556315 HCFC2Q9Y5Z7 792 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 R4GN57 208 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 FAM186AA6NE01 2351 aa5.51□□□□□ -1.53
ATXN3-239ENST00000556315 NEDD4P46934 1319 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 FRMPD4Q14CM0 1322 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 MICAL3Q7RTP6 2002 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 A0A0D9SFI3 127 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 B4E1Z4 1266 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 SMAD7O15105 426 aaKnown RBP5.5□□□□□ -1.53
ATXN3-239ENST00000556315 WEE2P0C1S8 567 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 ZSCAN22P10073 491 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-239ENST00000556315 KCNA2P16389 499 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 GIT2Q14161 759 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 PPP2R5EQ16537 467 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 RALGPS1Q5JS13 557 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 RARS2Q5T160 578 aaKnown RBP5.5□□□□□ -1.53
ATXN3-239ENST00000556315 IFIT1BQ5T764 474 aaKnown RBP5.5□□□□□ -1.53
ATXN3-239ENST00000556315 LRRC55Q6ZSA7 311 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 PLPPR4Q7Z2D5 763 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 HOMER1Q86YM7 354 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 DCLK2Q8N568 766 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 C12orf76Q8N812 135 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-239ENST00000556315 DNAJB8Q8NHS0 232 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 SMARCC2Q8TAQ2 1214 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 CUL5Q93034 780 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 ZBTB10Q96DT7 871 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 Q96M66 194 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 UBAC1Q9BSL1 405 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 KRTAP4-11Q9BYQ6 195 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 KRT23Q9C075 422 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 AZI2Q9H6S1 392 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 KCNK12Q9HB15 430 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 ACTR10Q9NZ32 417 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 SLAMF8Q9P0V8 285 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 MAD2L2Q9UI95 211 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 TMEM59LQ9UK28 342 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 DUSP12Q9UNI6 340 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 ST3GAL5Q9UNP4 418 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 LCTP09848 1927 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 MYH4Q9Y623 1939 aa5.5□□□□□ -1.53
ATXN3-239ENST00000556315 PRR5-ARHGAP8B1AHC4 643 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 MGEA5O60502 916 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 CLEC3AO75596 197 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 UBOX5O94941 541 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 HPXP02790 462 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 SP9P0CG40 484 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 ARP10275 920 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 FGFR1P11362 822 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 RAC2P15153 192 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 KLRC1P26715 233 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 POLR2BP30876 1174 aaKnown RBP5.49□□□□□ -1.53
ATXN3-239ENST00000556315 ALDH7A1P49419 539 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms