RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 ZNF213O14771 459 aa4.9□□□□□ -1.63
SNX6-204ENST00000555541 URI1O94763 535 aaPredicted RBP4.9□□□□□ -1.63
SNX6-204ENST00000555541 PTGER1P34995 402 aa4.9□□□□□ -1.63
SNX6-204ENST00000555541 TOB1P50616 345 aaPredicted RBP4.9□□□□□ -1.63
SNX6-204ENST00000555541 GRM1Q13255 1194 aa4.9□□□□□ -1.63
SNX6-204ENST00000555541 PROSER3Q2NL68 480 aa4.9□□□□□ -1.63
SNX6-204ENST00000555541 CT47A1Q5JQC4 288 aaPredicted RBP4.9□□□□□ -1.63
SNX6-204ENST00000555541 RSPH3Q86UC2 560 aa4.9□□□□□ -1.63
SNX6-204ENST00000555541 FAM109AQ8N4B1 249 aa4.9□□□□□ -1.63
SNX6-204ENST00000555541 OSBPL9Q96SU4 736 aa4.9□□□□□ -1.63
SNX6-204ENST00000555541 WACQ9BTA9 647 aa4.9□□□□□ -1.63
SNX6-204ENST00000555541 PACSIN1Q9BY11 444 aa4.9□□□□□ -1.63
SNX6-204ENST00000555541 SMOC2Q9H3U7 446 aa4.9□□□□□ -1.63
SNX6-204ENST00000555541 CALCOCO1Q9P1Z2 691 aa4.9□□□□□ -1.63
SNX6-204ENST00000555541 ZNF580Q9UK33 172 aa4.9□□□□□ -1.63
SNX6-204ENST00000555541 PADI4Q9UM07 663 aa4.9□□□□□ -1.63
SNX6-204ENST00000555541 CACNA1IQ9P0X4 2223 aa4.9□□□□□ -1.63
SNX6-204ENST00000555541 A0A0B4J269 797 aa4.89□□□□□ -1.63
SNX6-204ENST00000555541 NT5C1B-RDH14C9J2C7 533 aa4.89□□□□□ -1.63
SNX6-204ENST00000555541 ANXA1P04083 346 aa4.89□□□□□ -1.63
SNX6-204ENST00000555541 HNRNPCP07910 306 aaKnown RBP eCLIP4.89□□□□□ -1.636e-6■■■■□ 19.3
SNX6-204ENST00000555541 NR2F6P10588 404 aa4.89□□□□□ -1.63
SNX6-204ENST00000555541 PIGFQ07326 219 aa4.89□□□□□ -1.63
SNX6-204ENST00000555541 TUBB3Q13509 450 aa4.89□□□□□ -1.63
SNX6-204ENST00000555541 RAB39AQ14964 217 aa4.89□□□□□ -1.63
SNX6-204ENST00000555541 SLC44A4Q53GD3 710 aa4.89□□□□□ -1.63
SNX6-204ENST00000555541 CAMKK1Q8N5S9 505 aa4.89□□□□□ -1.63
SNX6-204ENST00000555541 C1orf162Q8NEQ5 155 aaPredicted RBP4.89□□□□□ -1.63
SNX6-204ENST00000555541 HDAC10Q969S8 669 aa4.89□□□□□ -1.63
SNX6-204ENST00000555541 RGMAQ96B86 450 aa4.89□□□□□ -1.63
SNX6-204ENST00000555541 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.89□□□□□ -1.63
SNX6-204ENST00000555541 LRP12Q9Y561 859 aa4.89□□□□□ -1.63
SNX6-204ENST00000555541 WASHC2AQ641Q2 1341 aa4.89□□□□□ -1.63
SNX6-204ENST00000555541 TISP43B9A030 160 aa4.88□□□□□ -1.63
SNX6-204ENST00000555541 F2RL2O00254 374 aa4.88□□□□□ -1.63
SNX6-204ENST00000555541 MOSPD3O75425 235 aa4.88□□□□□ -1.63
SNX6-204ENST00000555541 TTLL1O95922 423 aa4.88□□□□□ -1.63
SNX6-204ENST00000555541 BMP15O95972 392 aa4.88□□□□□ -1.63
SNX6-204ENST00000555541 CPEP16870 476 aa4.88□□□□□ -1.63
SNX6-204ENST00000555541 SFPQP23246 707 aaKnown RBP eCLIP4.88□□□□□ -1.63
SNX6-204ENST00000555541 KELP23276 732 aa4.88□□□□□ -1.63
SNX6-204ENST00000555541 CCT8P50990 548 aa4.88□□□□□ -1.63
SNX6-204ENST00000555541 DSC2Q02487 901 aa4.88□□□□□ -1.63
SNX6-204ENST00000555541 TCF15Q12870 199 aa4.88□□□□□ -1.63
SNX6-204ENST00000555541 SNAPC2Q13487 334 aa4.88□□□□□ -1.63
SNX6-204ENST00000555541 FAM153CQ494X1 144 aa4.88□□□□□ -1.63
SNX6-204ENST00000555541 PREPLQ4J6C6 727 aaPredicted RBP4.88□□□□□ -1.63
SNX6-204ENST00000555541 TMEM119Q4V9L6 283 aa4.88□□□□□ -1.63
SNX6-204ENST00000555541 SLC30A10Q6XR72 485 aa4.88□□□□□ -1.63
SNX6-204ENST00000555541 MIGA2Q7L4E1 593 aa4.88□□□□□ -1.63
SNX6-204ENST00000555541 PDSS2Q86YH6 399 aa4.88□□□□□ -1.63
SNX6-204ENST00000555541 SCAMP4Q969E2 229 aa4.88□□□□□ -1.63
SNX6-204ENST00000555541 COA7Q96BR5 231 aa4.88□□□□□ -1.63
SNX6-204ENST00000555541 CLPTM1LQ96KA5 538 aa4.88□□□□□ -1.63
SNX6-204ENST00000555541 ALG8Q9BVK2 526 aa4.88□□□□□ -1.63
SNX6-204ENST00000555541 SEMA4CQ9C0C4 833 aa4.88□□□□□ -1.63
SNX6-204ENST00000555541 AGAP1Q9UPQ3 857 aa4.88□□□□□ -1.63
SNX6-204ENST00000555541 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.88□□□□□ -1.63
SNX6-204ENST00000555541 CCDC154A6NI56 674 aa4.87□□□□□ -1.63
SNX6-204ENST00000555541 F5H697 171 aa4.87□□□□□ -1.63
SNX6-204ENST00000555541 FZD9O00144 591 aa4.87□□□□□ -1.63
SNX6-204ENST00000555541 CLSTN1O94985 981 aa4.87□□□□□ -1.63
SNX6-204ENST00000555541 CBSLP0DN79 551 aa4.87□□□□□ -1.63
SNX6-204ENST00000555541 CBSP35520 551 aa4.87□□□□□ -1.63
SNX6-204ENST00000555541 ETFDHQ16134 617 aa4.87□□□□□ -1.63
SNX6-204ENST00000555541 RUSC1-AS1Q66K80 236 aa4.87□□□□□ -1.63
SNX6-204ENST00000555541 TAF2Q6P1X5 1199 aa4.87□□□□□ -1.63
SNX6-204ENST00000555541 NEK8Q86SG6 692 aa4.87□□□□□ -1.63
SNX6-204ENST00000555541 CNTD1Q8N815 330 aa4.87□□□□□ -1.63
SNX6-204ENST00000555541 NSUN6Q8TEA1 469 aaKnown RBP4.87□□□□□ -1.63
SNX6-204ENST00000555541 KAT5Q92993 513 aa4.87□□□□□ -1.63
SNX6-204ENST00000555541 RPL36ALQ969Q0 106 aaKnown RBP4.87□□□□□ -1.63
SNX6-204ENST00000555541 SMOQ99835 787 aa4.87□□□□□ -1.63
SNX6-204ENST00000555541 QTRT1Q9BXR0 403 aaKnown RBP4.87□□□□□ -1.63
SNX6-204ENST00000555541 SERHLQ9NQF3 203 aa4.87□□□□□ -1.63
SNX6-204ENST00000555541 MTMR4Q9NYA4 1195 aa4.87□□□□□ -1.63
SNX6-204ENST00000555541 EHD3Q9NZN3 535 aa4.87□□□□□ -1.63
SNX6-204ENST00000555541 ZFXP17010 805 aaPredicted RBP4.86□□□□□ -1.63
SNX6-204ENST00000555541 MALP21145 153 aa4.86□□□□□ -1.63
SNX6-204ENST00000555541 MPGP29372 298 aa4.86□□□□□ -1.63
SNX6-204ENST00000555541 IARSP41252 1262 aaKnown RBP4.86□□□□□ -1.63
SNX6-204ENST00000555541 NDUFV1P49821 464 aa4.86□□□□□ -1.63
SNX6-204ENST00000555541 FHL1Q13642 323 aa4.86□□□□□ -1.63
SNX6-204ENST00000555541 HABP2Q14520 560 aaPredicted RBP4.86□□□□□ -1.63
SNX6-204ENST00000555541 SUMO4Q6EEV6 95 aa4.86□□□□□ -1.63
SNX6-204ENST00000555541 TECPR1Q7Z6L1 1165 aa4.86□□□□□ -1.63
SNX6-204ENST00000555541 FKBP10Q96AY3 582 aa4.86□□□□□ -1.63
SNX6-204ENST00000555541 BHMT2Q9H2M3 363 aa4.86□□□□□ -1.63
SNX6-204ENST00000555541 SIDT1Q9NXL6 827 aaKnown RBP4.86□□□□□ -1.63
SNX6-204ENST00000555541 SAP30BPQ9UHR5 308 aaKnown RBP4.86□□□□□ -1.63
SNX6-204ENST00000555541 SERPINB13Q9UIV8 391 aa4.86□□□□□ -1.63
SNX6-204ENST00000555541 PRKAB1Q9Y478 270 aa4.86□□□□□ -1.63
SNX6-204ENST00000555541 MYO1FO00160 1098 aa4.85□□□□□ -1.63
SNX6-204ENST00000555541 POLRMTO00411 1230 aaKnown RBP4.85□□□□□ -1.63
SNX6-204ENST00000555541 ADAMTS3O15072 1205 aa4.85□□□□□ -1.63
SNX6-204ENST00000555541 EPHB2P29323 1055 aa4.85□□□□□ -1.63
SNX6-204ENST00000555541 CNGA1P29973 690 aa4.85□□□□□ -1.63
SNX6-204ENST00000555541 TUBA4AP68366 448 aa4.85□□□□□ -1.63
SNX6-204ENST00000555541 BMPR2Q13873 1038 aa4.85□□□□□ -1.63
SNX6-204ENST00000555541 SUPT20HL1Q3ZLR7 823 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms