RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 MCM10Q7L590 875 aa6.03□□□□□ -1.44
MTHFD1-206ENST00000554353 RHOT1Q8IXI2 618 aa6.03□□□□□ -1.44
MTHFD1-206ENST00000554353 LRRC56Q8IYG6 542 aaPredicted RBP6.03□□□□□ -1.44
MTHFD1-206ENST00000554353 OR2I1PQ8NGU4 316 aa6.03□□□□□ -1.44
MTHFD1-206ENST00000554353 KAT5Q92993 513 aa6.03□□□□□ -1.44
MTHFD1-206ENST00000554353 TIFAQ96CG3 184 aa6.03□□□□□ -1.44
MTHFD1-206ENST00000554353 TOX2Q96NM4 488 aa6.03□□□□□ -1.44
MTHFD1-206ENST00000554353 C7orf25Q9BPX7 421 aa6.03□□□□□ -1.44
MTHFD1-206ENST00000554353 API5Q9BZZ5 524 aaKnown RBP6.03□□□□□ -1.44
MTHFD1-206ENST00000554353 CHMP4BQ9H444 224 aaKnown RBP6.03□□□□□ -1.44
MTHFD1-206ENST00000554353 OBP2AQ9NY56 170 aa6.03□□□□□ -1.44
MTHFD1-206ENST00000554353 NCDNQ9UBB6 729 aa6.03□□□□□ -1.44
MTHFD1-206ENST00000554353 NR2E1Q9Y466 385 aa6.03□□□□□ -1.44
MTHFD1-206ENST00000554353 IPPQ9Y573 584 aa6.03□□□□□ -1.44
MTHFD1-206ENST00000554353 CACNA1FO60840 1977 aa6.03□□□□□ -1.44
MTHFD1-206ENST00000554353 FAM171A2A8MVW0 826 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 ARHGAP6O43182 974 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 MMP10P09238 476 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 MYBP10242 640 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 ECHS1P30084 290 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 RFC4P35249 363 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 WASP42768 502 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 PER3P56645 1201 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 SEPT2Q15019 361 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 RNF151Q2KHN1 245 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 AMOTQ4VCS5 1084 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 C19orf54Q5BKX5 351 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 IL31Q6EBC2 164 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 ZNF530Q6P9A1 599 aaPredicted RBP6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 BORAQ6PGQ7 559 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 CAMKK1Q8N5S9 505 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 ANKRD53Q8N9V6 530 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 SLC35G2Q8TBE7 412 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 LPPQ93052 612 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 SECISBP2LQ93073 1101 aaKnown RBP6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 HPS3Q969F9 1004 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 RAB24Q969Q5 203 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 GCC1Q96CN9 775 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 RPL10LQ96L21 214 aaKnown RBP6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 UHRF1Q96T88 793 aaPredicted RBP6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 PPCSQ9HAB8 311 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 PTPRHQ9HD43 1115 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 LZTS1Q9Y250 596 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 FRMD4BQ9Y2L6 1034 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 CCDC88AQ3V6T2 1871 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 CICQ96RK0 1608 aaPredicted RBP6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 PLEKHG2Q9H7P9 1386 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 ARFGEF1Q9Y6D6 1849 aa6.02□□□□□ -1.45
MTHFD1-206ENST00000554353 KDM6AO15550 1401 aaPredicted RBP6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 SBF1O95248 1867 aa6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 A0A0G2JLW4 131 aa6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 TBX3O15119 743 aa6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 NOBOXO60393 691 aa6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 CTNND1O60716 968 aaKnown RBP6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 FRAT2O75474 233 aaPredicted RBP6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 IFIT2P09913 472 aaKnown RBP6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 VDRP11473 427 aa6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 TRAPPC10P48553 1259 aa6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 NEK3P51956 506 aa6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 FAM193AP78312 1265 aa6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 DUSP2Q05923 314 aa6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 BECN1Q14457 450 aa6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 GRAMD1BQ3KR37 738 aa6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 ATAT1Q5SQI0 421 aa6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 B3GNT9Q6UX72 402 aa6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 Q6ZVL8 140 aa6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 SPICE1Q8N0Z3 855 aa6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 ZNF480Q8WV37 535 aa6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 MVB12AQ96EY5 273 aa6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 C22orf23Q9BZE7 217 aa6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 SLC6A15Q9H2J7 730 aa6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 C12orf65Q9H3J6 166 aaKnown RBP6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 USP40Q9NVE5 1235 aa6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 TJP1Q07157 1748 aa6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 ADCY9O60503 1353 aa6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 AFDNP55196 1824 aaKnown RBP6.01□□□□□ -1.45
MTHFD1-206ENST00000554353 ERC2O15083 957 aa6□□□□□ -1.45
MTHFD1-206ENST00000554353 HTATSF1O43719 755 aaKnown RBP6□□□□□ -1.45
MTHFD1-206ENST00000554353 B4GALT3O60512 393 aa6□□□□□ -1.45
MTHFD1-206ENST00000554353 ITGA10O75578 1167 aa6□□□□□ -1.45
MTHFD1-206ENST00000554353 RPS6KA4O75676 772 aa6□□□□□ -1.45
MTHFD1-206ENST00000554353 ENDOD1O94919 500 aa6□□□□□ -1.45
MTHFD1-206ENST00000554353 JUNP05412 331 aaKnown RBP6□□□□□ -1.45
MTHFD1-206ENST00000554353 LDHCP07864 332 aa6□□□□□ -1.45
MTHFD1-206ENST00000554353 VSIG10L2P0DP72 767 aa6□□□□□ -1.45
MTHFD1-206ENST00000554353 GYS1P13807 737 aa6□□□□□ -1.45
MTHFD1-206ENST00000554353 DPEP1P16444 411 aa6□□□□□ -1.45
MTHFD1-206ENST00000554353 CFPP27918 469 aa6□□□□□ -1.45
MTHFD1-206ENST00000554353 ADCY7P51828 1080 aa6□□□□□ -1.45
MTHFD1-206ENST00000554353 WNT3AP56704 352 aa6□□□□□ -1.45
MTHFD1-206ENST00000554353 TGFB2P61812 414 aa6□□□□□ -1.45
MTHFD1-206ENST00000554353 PURAQ00577 322 aaKnown RBP6□□□□□ -1.45
MTHFD1-206ENST00000554353 KCTD2Q14681 263 aa6□□□□□ -1.45
MTHFD1-206ENST00000554353 MST1LQ2TV78 715 aa6□□□□□ -1.45
MTHFD1-206ENST00000554353 PGS1Q32NB8 556 aa6□□□□□ -1.45
MTHFD1-206ENST00000554353 INO80DQ53TQ3 878 aaPredicted RBP6□□□□□ -1.45
MTHFD1-206ENST00000554353 BMP2KLQ5H9B9 411 aa6□□□□□ -1.45
MTHFD1-206ENST00000554353 C1orf141Q5JVX7 400 aa6□□□□□ -1.45
MTHFD1-206ENST00000554353 ANKRD45Q5TZF3 282 aa6□□□□□ -1.45
MTHFD1-206ENST00000554353 G2E3Q7L622 706 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms