RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 LRRC41Q15345 812 aa8.37□□□□□ -1.07
PCNX1-205ENST00000553508 LNX2Q8N448 690 aa8.37□□□□□ -1.07
PCNX1-205ENST00000553508 PPP1R35Q8TAP8 253 aa8.37□□□□□ -1.07
PCNX1-205ENST00000553508 KLHDC4Q8TBB5 520 aa8.37□□□□□ -1.07
PCNX1-205ENST00000553508 BRIX1Q8TDN6 353 aaKnown RBP8.37□□□□□ -1.07
PCNX1-205ENST00000553508 LPIN2Q92539 896 aa8.37□□□□□ -1.07
PCNX1-205ENST00000553508 CNPPD1Q9BV87 410 aa8.37□□□□□ -1.07
PCNX1-205ENST00000553508 TINAGL1Q9GZM7 467 aaPredicted RBP8.37□□□□□ -1.07
PCNX1-205ENST00000553508 SYNPO2LQ9H987 977 aa8.37□□□□□ -1.07
PCNX1-205ENST00000553508 NMRK2Q9NPI5 230 aa8.37□□□□□ -1.07
PCNX1-205ENST00000553508 CPA4Q9UI42 421 aa8.37□□□□□ -1.07
PCNX1-205ENST00000553508 ZDHHC8Q9ULC8 765 aa8.37□□□□□ -1.07
PCNX1-205ENST00000553508 F5H697 171 aa8.36□□□□□ -1.07
PCNX1-205ENST00000553508 NPTX2P47972 431 aa8.36□□□□□ -1.07
PCNX1-205ENST00000553508 MRPS35P82673 323 aaKnown RBP8.36□□□□□ -1.07
PCNX1-205ENST00000553508 KHDC1LQ5JSQ8 128 aa8.36□□□□□ -1.07
PCNX1-205ENST00000553508 TAF2Q6P1X5 1199 aa8.36□□□□□ -1.07
PCNX1-205ENST00000553508 DNAJC10Q8IXB1 793 aa8.36□□□□□ -1.07
PCNX1-205ENST00000553508 CELF5Q8N6W0 485 aaKnown RBP8.36□□□□□ -1.07
PCNX1-205ENST00000553508 PSD4Q8NDX1 1056 aa8.36□□□□□ -1.07
PCNX1-205ENST00000553508 PLBD2Q8NHP8 589 aa8.36□□□□□ -1.07
PCNX1-205ENST00000553508 POC1BQ8TC44 478 aa8.36□□□□□ -1.07
PCNX1-205ENST00000553508 ACTRT2Q8TDY3 377 aa8.36□□□□□ -1.07
PCNX1-205ENST00000553508 FBXL20Q96IG2 436 aa8.36□□□□□ -1.07
PCNX1-205ENST00000553508 ANLNQ9NQW6 1124 aa8.36□□□□□ -1.07
PCNX1-205ENST00000553508 ETAA1Q9NY74 926 aa8.36□□□□□ -1.07
PCNX1-205ENST00000553508 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.36□□□□□ -1.07
PCNX1-205ENST00000553508 YY2O15391 372 aa8.35□□□□□ -1.07
PCNX1-205ENST00000553508 CHEK2O96017 543 aa8.35□□□□□ -1.07
PCNX1-205ENST00000553508 PPP3CBP16298 524 aa8.35□□□□□ -1.07
PCNX1-205ENST00000553508 TYRP1P17643 537 aa8.35□□□□□ -1.07
PCNX1-205ENST00000553508 KCNJ5P48544 419 aa8.35□□□□□ -1.07
PCNX1-205ENST00000553508 PTH2RP49190 550 aa8.35□□□□□ -1.07
PCNX1-205ENST00000553508 ERCC6LQ2NKX8 1250 aa8.35□□□□□ -1.07
PCNX1-205ENST00000553508 MICALCLQ6ZW33 695 aa8.35□□□□□ -1.07
PCNX1-205ENST00000553508 FAM46DQ8NEK8 389 aa8.35□□□□□ -1.07
PCNX1-205ENST00000553508 SLC35G2Q8TBE7 412 aa8.35□□□□□ -1.07
PCNX1-205ENST00000553508 ACO2Q99798 780 aaKnown RBP8.35□□□□□ -1.07
PCNX1-205ENST00000553508 SARS2Q9NP81 518 aaKnown RBP8.35□□□□□ -1.07
PCNX1-205ENST00000553508 G3BP2Q9UN86 482 aaKnown RBP8.35□□□□□ -1.07
PCNX1-205ENST00000553508 RFPL1O75677 317 aa8.34□□□□□ -1.07
PCNX1-205ENST00000553508 SRGNP10124 158 aa8.34□□□□□ -1.07
PCNX1-205ENST00000553508 SOX8P57073 446 aa8.34□□□□□ -1.07
PCNX1-205ENST00000553508 NANOS3P60323 173 aaKnown RBP8.34□□□□□ -1.07
PCNX1-205ENST00000553508 ZNF169Q14929 603 aaPredicted RBP8.34□□□□□ -1.07
PCNX1-205ENST00000553508 VWA1Q6PCB0 445 aa8.34□□□□□ -1.07
PCNX1-205ENST00000553508 EPM2AIP1Q7L775 607 aaPredicted RBP8.34□□□□□ -1.07
PCNX1-205ENST00000553508 DENND1CQ8IV53 801 aa8.34□□□□□ -1.07
PCNX1-205ENST00000553508 FAM9AQ8IZU1 332 aaPredicted RBP8.34□□□□□ -1.07
PCNX1-205ENST00000553508 B3GALNT2Q8NCR0 500 aa8.34□□□□□ -1.07
PCNX1-205ENST00000553508 JDP2Q8WYK2 163 aa8.34□□□□□ -1.07
PCNX1-205ENST00000553508 TFAP2BQ92481 460 aa8.34□□□□□ -1.07
PCNX1-205ENST00000553508 MTFMTQ96DP5 389 aaKnown RBP8.34□□□□□ -1.07
PCNX1-205ENST00000553508 AIFM3Q96NN9 605 aa8.34□□□□□ -1.07
PCNX1-205ENST00000553508 SIK2Q9H0K1 926 aa8.34□□□□□ -1.07
PCNX1-205ENST00000553508 RSAD1Q9HA92 442 aa8.34□□□□□ -1.07
PCNX1-205ENST00000553508 KIAA1586Q9HCI6 787 aa8.34□□□□□ -1.07
PCNX1-205ENST00000553508 ZAR1LA6NP61 321 aa8.33□□□□□ -1.08
PCNX1-205ENST00000553508 E7ENX8 843 aa8.33□□□□□ -1.08
PCNX1-205ENST00000553508 PRPF3O43395 683 aaKnown RBP8.33□□□□□ -1.08
PCNX1-205ENST00000553508 UBXN7O94888 489 aa8.33□□□□□ -1.08
PCNX1-205ENST00000553508 CHRM2P08172 466 aa8.33□□□□□ -1.08
PCNX1-205ENST00000553508 HTR1BP28222 390 aa8.33□□□□□ -1.08
PCNX1-205ENST00000553508 FOLR3P41439 243 aa8.33□□□□□ -1.08
PCNX1-205ENST00000553508 CLK3P49761 638 aaKnown RBP8.33□□□□□ -1.08
PCNX1-205ENST00000553508 NDUFV1P49821 464 aa8.33□□□□□ -1.08
PCNX1-205ENST00000553508 HNRNPMP52272 730 aaKnown RBP eCLIP8.33□□□□□ -1.08
PCNX1-205ENST00000553508 TAP2Q03519 686 aa8.33□□□□□ -1.08
PCNX1-205ENST00000553508 HLXQ14774 488 aaPredicted RBP8.33□□□□□ -1.08
PCNX1-205ENST00000553508 B3GNT9Q6UX72 402 aa8.33□□□□□ -1.08
PCNX1-205ENST00000553508 TMPRSS9Q7Z410 1059 aa8.33□□□□□ -1.08
PCNX1-205ENST00000553508 CHPFQ8IZ52 775 aa8.33□□□□□ -1.08
PCNX1-205ENST00000553508 CRAMP1Q96RY5 1269 aa8.33□□□□□ -1.08
PCNX1-205ENST00000553508 EID1Q9Y6B2 187 aa8.33□□□□□ -1.08
PCNX1-205ENST00000553508 A0A0B4J269 797 aa8.32□□□□□ -1.08
PCNX1-205ENST00000553508 SCGB1D2O95969 90 aa8.32□□□□□ -1.08
PCNX1-205ENST00000553508 SIM1P81133 766 aaPredicted RBP8.32□□□□□ -1.08
PCNX1-205ENST00000553508 TUBB3Q13509 450 aa8.32□□□□□ -1.08
PCNX1-205ENST00000553508 GTF2H3Q13889 308 aa8.32□□□□□ -1.08
PCNX1-205ENST00000553508 BOP1Q14137 746 aaKnown RBP8.32□□□□□ -1.08
PCNX1-205ENST00000553508 PPP2R5AQ15172 486 aa8.32□□□□□ -1.08
PCNX1-205ENST00000553508 STRIP1Q5VSL9 837 aa8.32□□□□□ -1.08
PCNX1-205ENST00000553508 KAZNQ674X7 775 aa8.32□□□□□ -1.08
PCNX1-205ENST00000553508 ANKRD13AQ8IZ07 590 aa8.32□□□□□ -1.08
PCNX1-205ENST00000553508 ZBTB34Q8NCN2 500 aa8.32□□□□□ -1.08
PCNX1-205ENST00000553508 SIMC1Q8NDZ2 872 aa8.32□□□□□ -1.08
PCNX1-205ENST00000553508 MYCBPAPQ8TBZ2 947 aa8.32□□□□□ -1.08
PCNX1-205ENST00000553508 CAGE1Q8TC20 777 aa8.32□□□□□ -1.08
PCNX1-205ENST00000553508 SLC9A6Q92581 669 aa8.32□□□□□ -1.08
PCNX1-205ENST00000553508 NT5C1BQ96P26 610 aa8.32□□□□□ -1.08
PCNX1-205ENST00000553508 TAAR9Q96RI9 348 aa8.32□□□□□ -1.08
PCNX1-205ENST00000553508 CAMKK2Q96RR4 588 aa8.32□□□□□ -1.08
PCNX1-205ENST00000553508 CNNM1Q9NRU3 951 aa8.32□□□□□ -1.08
PCNX1-205ENST00000553508 RAD54BQ9Y620 910 aa8.32□□□□□ -1.08
PCNX1-205ENST00000553508 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.32□□□□□ -1.08
PCNX1-205ENST00000553508 COL11A2P13942 1736 aaPredicted RBP8.32□□□□□ -1.08
PCNX1-205ENST00000553508 OVOL3O00110 214 aa8.31□□□□□ -1.08
PCNX1-205ENST00000553508 MGST3O14880 152 aa8.31□□□□□ -1.08
PCNX1-205ENST00000553508 ITGALP20701 1170 aa8.31□□□□□ -1.08
PCNX1-205ENST00000553508 RAB1AP62820 205 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms