RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 FSTL4Q6MZW2 842 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 ZPBP2Q6X784 338 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 CACNA2D4Q7Z3S7 1137 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 CCDC83Q8IWF9 413 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 OR10T2Q8NGX3 314 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 SPIRE2Q8WWL2 714 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 TCEAL3Q969E4 200 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 CHFRQ96EP1 664 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 LOXL4Q96JB6 756 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 SEPT5Q99719 369 aaPredicted RBP9.87□□□□□ -0.83
SYNE2-209ENST00000553308 NTPCRQ9BSD7 190 aaKnown RBP9.87□□□□□ -0.83
SYNE2-209ENST00000553308 MMTAG2Q9BU76 263 aaKnown RBP9.87□□□□□ -0.83
SYNE2-209ENST00000553308 TASP1Q9H6P5 420 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 PLEKHA5Q9HAU0 1116 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 IL21Q9HBE4 155 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 UBQLN1Q9UMX0 589 aaKnown RBP9.87□□□□□ -0.83
SYNE2-209ENST00000553308 ASB3Q9Y575 518 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 PCDHB6Q9Y5E3 794 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 ZFHX4Q86UP3 3567 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 CHD8Q9HCK8 2581 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 OTOL1A6NHN0 477 aaPredicted RBP9.86□□□□□ -0.83
SYNE2-209ENST00000553308 LACTBL1A8MY62 500 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 FGF19O95750 216 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 ODC1P11926 461 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 PLS3P13797 630 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 ANK1P16157 1881 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 ATF6P18850 670 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 CYP3A5P20815 502 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 GUCY2CP25092 1073 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 MPLP40238 635 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 TRAPPC10P48553 1259 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 TOB1P50616 345 aaPredicted RBP9.86□□□□□ -0.83
SYNE2-209ENST00000553308 GNL2Q13823 731 aaKnown RBP9.86□□□□□ -0.83
SYNE2-209ENST00000553308 ZRSR1Q15695 479 aaKnown RBP9.86□□□□□ -0.83
SYNE2-209ENST00000553308 ENOX2Q16206 610 aaKnown RBP9.86□□□□□ -0.83
SYNE2-209ENST00000553308 SLC39A12Q504Y0 691 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 TMEM196Q5HYL7 178 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 PLA2G2CQ5R387 149 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 KRT79Q5XKE5 535 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 TRIM68Q6AZZ1 485 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 ARMCX5Q6P1M9 558 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 ITIH5Q86UX2 942 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 FBXO18Q8NFZ0 1043 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 BICD1Q96G01 975 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 SENP8Q96LD8 212 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 HHIPQ96QV1 700 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 SLC46A2Q9BY10 475 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 RAB34Q9BZG1 259 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 HPS4Q9NQG7 708 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 GKN1Q9NS71 199 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 NOL7Q9UMY1 257 aaKnown RBP9.86□□□□□ -0.83
SYNE2-209ENST00000553308 SLC8A2Q9UPR5 921 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 CCL26Q9Y258 94 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 STK24Q9Y6E0 443 aa9.86□□□□□ -0.83
SYNE2-209ENST00000553308 MYH11P35749 1972 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 SPAG17Q6Q759 2223 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 CCDC163A0A0D9SF12 145 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 NPHP3-ACAD11A0A0J9YXS1 232 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 FAM189A1O60320 539 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 RNF40O75150 1001 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 KCNK5O95279 499 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 EGFP01133 1207 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 NFICP08651 508 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 ARSAP15289 507 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 WEE1P30291 646 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 CDC25CP30307 473 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 NMT1P30419 496 aaKnown RBP9.85□□□□□ -0.83
SYNE2-209ENST00000553308 SMTNP53814 917 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 LILRA4P59901 499 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 VEPH1Q14D04 833 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 MGAT5BQ3V5L5 792 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 SPATA1Q5VX52 437 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 NAIF1Q69YI7 327 aaPredicted RBP9.85□□□□□ -0.83
SYNE2-209ENST00000553308 JADE1Q6IE81 842 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 PSAPL1Q6NUJ1 521 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 RIN3Q8TB24 985 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 GIPC2Q8TF65 315 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 GCNAQ96QF7 691 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 PLIN2Q99541 437 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 FAM83CQ9BQN1 747 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 TIPINQ9BVW5 301 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 LSM14BQ9BX40 385 aaKnown RBP9.85□□□□□ -0.83
SYNE2-209ENST00000553308 EBF3Q9H4W6 596 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 THG1LQ9NWX6 298 aaKnown RBP9.85□□□□□ -0.83
SYNE2-209ENST00000553308 HSFX1Q9UBD0 423 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 PCDHGA5Q9Y5G8 931 aa9.85□□□□□ -0.83
SYNE2-209ENST00000553308 SDK1Q7Z5N4 2213 aa9.84□□□□□ -0.83
SYNE2-209ENST00000553308 TRDMT1O14717 391 aaKnown RBP9.84□□□□□ -0.83
SYNE2-209ENST00000553308 OGTO15294 1046 aa9.84□□□□□ -0.83
SYNE2-209ENST00000553308 XPOTO43592 962 aaKnown RBP9.84□□□□□ -0.83
SYNE2-209ENST00000553308 AKAP3O75969 853 aa9.84□□□□□ -0.83
SYNE2-209ENST00000553308 U2AF2P26368 475 aaKnown RBP eCLIP9.84□□□□□ -0.83
SYNE2-209ENST00000553308 LIG4P49917 911 aa9.84□□□□□ -0.83
SYNE2-209ENST00000553308 SLC12A3P55017 1021 aa9.84□□□□□ -0.83
SYNE2-209ENST00000553308 NCKAP1LP55160 1127 aa9.84□□□□□ -0.83
SYNE2-209ENST00000553308 GRSF1Q12849 480 aaKnown RBP eCLIP9.84□□□□□ -0.83
SYNE2-209ENST00000553308 RUNX3Q13761 415 aa9.84□□□□□ -0.83
SYNE2-209ENST00000553308 PLK5Q496M5 336 aa9.84□□□□□ -0.83
SYNE2-209ENST00000553308 C9orf57Q5W0N0 161 aa9.84□□□□□ -0.83
SYNE2-209ENST00000553308 RNF43Q68DV7 783 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms