RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 CASP4P49662 377 aa20.76■□□□□ 0.91
PTCH1-227ENST00000553256 PNOCQ13519 176 aa20.76■□□□□ 0.91
PTCH1-227ENST00000553256 HTR4Q13639 388 aa20.76■□□□□ 0.91
PTCH1-227ENST00000553256 SOWAHAQ2M3V2 549 aa20.76■□□□□ 0.91
PTCH1-227ENST00000553256 HFE2Q6ZVN8 426 aa20.76■□□□□ 0.91
PTCH1-227ENST00000553256 ATAD1Q8NBU5 361 aa20.76■□□□□ 0.91
PTCH1-227ENST00000553256 PARD3BQ8TEW8 1205 aa20.76■□□□□ 0.91
PTCH1-227ENST00000553256 FGF13Q92913 245 aa20.76■□□□□ 0.91
PTCH1-227ENST00000553256 XYLT2Q9H1B5 865 aa20.76■□□□□ 0.91
PTCH1-227ENST00000553256 CDH7Q9ULB5 785 aa20.76■□□□□ 0.91
PTCH1-227ENST00000553256 YIPF1Q9Y548 306 aa20.76■□□□□ 0.91
PTCH1-227ENST00000553256 ZDBF2Q9HCK1 2354 aa20.75■□□□□ 0.91
PTCH1-227ENST00000553256 GADD45BO75293 160 aaPredicted RBP20.75■□□□□ 0.91
PTCH1-227ENST00000553256 NR3C1P04150 777 aa20.75■□□□□ 0.91
PTCH1-227ENST00000553256 TMEM191BP0C7N4 346 aa20.75■□□□□ 0.91
PTCH1-227ENST00000553256 CPB1P15086 417 aa20.75■□□□□ 0.91
PTCH1-227ENST00000553256 DUSP4Q13115 394 aa20.75■□□□□ 0.91
PTCH1-227ENST00000553256 PABPC1LQ4VXU2 614 aaKnown RBP20.75■□□□□ 0.91
PTCH1-227ENST00000553256 COBLL1Q53SF7 1204 aa20.75■□□□□ 0.91
PTCH1-227ENST00000553256 GET4Q7L5D6 327 aaPredicted RBP20.75■□□□□ 0.91
PTCH1-227ENST00000553256 NPAS3Q8IXF0 933 aa20.75■□□□□ 0.91
PTCH1-227ENST00000553256 UBALD2Q8IYN6 164 aa20.75■□□□□ 0.91
PTCH1-227ENST00000553256 TOP6BLQ8N6T0 577 aa20.75■□□□□ 0.91
PTCH1-227ENST00000553256 SPATA18Q8TC71 538 aa20.75■□□□□ 0.91
PTCH1-227ENST00000553256 KBTBD7Q8WVZ9 684 aa20.75■□□□□ 0.91
PTCH1-227ENST00000553256 RSAD2Q8WXG1 361 aa20.75■□□□□ 0.91
PTCH1-227ENST00000553256 ANKRD36BP1Q96IX9 119 aa20.75■□□□□ 0.91
PTCH1-227ENST00000553256 PGLYRP2Q96PD5 576 aa20.75■□□□□ 0.91
PTCH1-227ENST00000553256 TMLHEQ9NVH6 421 aa20.75■□□□□ 0.91
PTCH1-227ENST00000553256 IGSF9Q9P2J2 1179 aa20.75■□□□□ 0.91
PTCH1-227ENST00000553256 NME7Q9Y5B8 376 aa20.75■□□□□ 0.91
PTCH1-227ENST00000553256 ZFP37Q9Y6Q3 630 aaPredicted RBP20.75■□□□□ 0.91
PTCH1-227ENST00000553256 WDFY4Q6ZS81 3184 aa20.74■□□□□ 0.91
PTCH1-227ENST00000553256 TMEM221A6NGB7 291 aa20.74■□□□□ 0.91
PTCH1-227ENST00000553256 LRRIQ3A6PVS8 624 aaPredicted RBP20.74■□□□□ 0.91
PTCH1-227ENST00000553256 M0R296 226 aa20.74■□□□□ 0.91
PTCH1-227ENST00000553256 PRRG1O14668 218 aa20.74■□□□□ 0.91
PTCH1-227ENST00000553256 EXOC3O60645 756 aa20.74■□□□□ 0.91
PTCH1-227ENST00000553256 MICAL2O94851 1124 aa20.74■□□□□ 0.91
PTCH1-227ENST00000553256 STAU1O95793 577 aaKnown RBP20.74■□□□□ 0.91
PTCH1-227ENST00000553256 ELF1P32519 619 aa20.74■□□□□ 0.91
PTCH1-227ENST00000553256 TWF1Q12792 350 aa20.74■□□□□ 0.91
PTCH1-227ENST00000553256 MTMR3Q13615 1198 aa20.74■□□□□ 0.91
PTCH1-227ENST00000553256 TMC8Q8IU68 726 aa20.74■□□□□ 0.91
PTCH1-227ENST00000553256 NOC3LQ8WTT2 800 aaKnown RBP20.74■□□□□ 0.91
PTCH1-227ENST00000553256 CCDC127Q96BQ5 260 aa20.74■□□□□ 0.91
PTCH1-227ENST00000553256 MAPK13O15264 365 aa20.73■□□□□ 0.91
PTCH1-227ENST00000553256 HCRTO43612 131 aa20.73■□□□□ 0.91
PTCH1-227ENST00000553256 PRPF40AO75400 957 aaKnown RBP20.73■□□□□ 0.91
PTCH1-227ENST00000553256 C4BPAP04003 597 aaKnown RBP20.73■□□□□ 0.91
PTCH1-227ENST00000553256 DLATP10515 647 aaKnown RBP20.73■□□□□ 0.91
PTCH1-227ENST00000553256 PTPN2P17706 415 aa20.73■□□□□ 0.91
PTCH1-227ENST00000553256 GBP2P32456 591 aaPredicted RBP20.73■□□□□ 0.91
PTCH1-227ENST00000553256 DLG4P78352 724 aa20.73■□□□□ 0.91
PTCH1-227ENST00000553256 TDGQ13569 410 aa20.73■□□□□ 0.91
PTCH1-227ENST00000553256 DPH6Q7L8W6 267 aa20.73■□□□□ 0.91
PTCH1-227ENST00000553256 TMEM86AQ8N2M4 240 aa20.73■□□□□ 0.91
PTCH1-227ENST00000553256 SLC44A3Q8N4M1 653 aa20.73■□□□□ 0.91
PTCH1-227ENST00000553256 NXPE3Q969Y0 559 aa20.73■□□□□ 0.91
PTCH1-227ENST00000553256 TCEAL4Q96EI5 215 aa20.73■□□□□ 0.91
PTCH1-227ENST00000553256 HPDLQ96IR7 371 aa20.73■□□□□ 0.91
PTCH1-227ENST00000553256 ACBD6Q9BR61 282 aa20.73■□□□□ 0.91
PTCH1-227ENST00000553256 RPP25Q9BUL9 199 aaKnown RBP20.73■□□□□ 0.91
PTCH1-227ENST00000553256 VRTNQ9H8Y1 702 aa20.73■□□□□ 0.91
PTCH1-227ENST00000553256 RAPGEFL1Q9UHV5 662 aa20.73■□□□□ 0.91
PTCH1-227ENST00000553256 POLIQ9UNA4 740 aa20.73■□□□□ 0.91
PTCH1-227ENST00000553256 DUSP12Q9UNI6 340 aa20.73■□□□□ 0.91
PTCH1-227ENST00000553256 SLC27A5Q9Y2P5 690 aa20.73■□□□□ 0.91
PTCH1-227ENST00000553256 PCDHA5Q9Y5H7 936 aa20.73■□□□□ 0.91
PTCH1-227ENST00000553256 SNX9Q9Y5X1 595 aa20.73■□□□□ 0.91
PTCH1-227ENST00000553256 AKAP3O75969 853 aa20.72■□□□□ 0.91
PTCH1-227ENST00000553256 VNN1O95497 513 aa20.72■□□□□ 0.91
PTCH1-227ENST00000553256 TNNC2P02585 160 aa20.72■□□□□ 0.91
PTCH1-227ENST00000553256 LRG1P02750 347 aa20.72■□□□□ 0.91
PTCH1-227ENST00000553256 ATF6P18850 670 aa20.72■□□□□ 0.91
PTCH1-227ENST00000553256 BFSP1Q12934 665 aa20.72■□□□□ 0.91
PTCH1-227ENST00000553256 CCDC142Q17RM4 750 aa20.72■□□□□ 0.91
PTCH1-227ENST00000553256 SLC39A12Q504Y0 691 aa20.72■□□□□ 0.91
PTCH1-227ENST00000553256 TDRD10Q5VZ19 366 aaKnown RBP20.72■□□□□ 0.91
PTCH1-227ENST00000553256 ZC3H3Q8IXZ2 948 aaKnown RBP20.72■□□□□ 0.91
PTCH1-227ENST00000553256 SMYD4Q8IYR2 804 aaPredicted RBP20.72■□□□□ 0.91
PTCH1-227ENST00000553256 HS6ST3Q8IZP7 471 aa20.72■□□□□ 0.91
PTCH1-227ENST00000553256 ERCC4Q92889 916 aaPredicted RBP20.72■□□□□ 0.91
PTCH1-227ENST00000553256 FGF14Q92915 247 aa20.72■□□□□ 0.91
PTCH1-227ENST00000553256 GSDMAQ96QA5 445 aa20.72■□□□□ 0.91
PTCH1-227ENST00000553256 MAPK8IP1Q9UQF2 711 aa20.72■□□□□ 0.91
PTCH1-227ENST00000553256 MUC6Q6W4X9 2439 aa20.71■□□□□ 0.91
PTCH1-227ENST00000553256 NARSO43776 548 aaKnown RBP20.71■□□□□ 0.91
PTCH1-227ENST00000553256 KRT19P08727 400 aa20.71■□□□□ 0.91
PTCH1-227ENST00000553256 CEBPBP17676 345 aa20.71■□□□□ 0.91
PTCH1-227ENST00000553256 TNNI1P19237 187 aa20.71■□□□□ 0.91
PTCH1-227ENST00000553256 COL9A1P20849 921 aa20.71■□□□□ 0.91
PTCH1-227ENST00000553256 SMARCB1Q12824 385 aa20.71■□□□□ 0.91
PTCH1-227ENST00000553256 FAM171BQ6P995 826 aa20.71■□□□□ 0.91
PTCH1-227ENST00000553256 PARM1Q6UWI2 310 aa20.71■□□□□ 0.91
PTCH1-227ENST00000553256 METTL23Q86XA0 190 aa20.71■□□□□ 0.91
PTCH1-227ENST00000553256 TMC2Q8TDI7 906 aa20.71■□□□□ 0.91
PTCH1-227ENST00000553256 FNBP1Q96RU3 617 aa20.71■□□□□ 0.91
PTCH1-227ENST00000553256 NUMBLQ9Y6R0 609 aa20.71■□□□□ 0.91
PTCH1-227ENST00000553256 HUS1O60921 280 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms