RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 PLCB2Q00722 1185 aa14.1□□□□□ -0.15
VPS29-211ENST00000553128 YWHAHQ04917 246 aaPredicted RBP14.1□□□□□ -0.15
VPS29-211ENST00000553128 SPAG1Q07617 926 aa14.1□□□□□ -0.15
VPS29-211ENST00000553128 GPR17Q13304 367 aa14.1□□□□□ -0.15
VPS29-211ENST00000553128 PLD1Q13393 1074 aa14.1□□□□□ -0.15
VPS29-211ENST00000553128 RUNX3Q13761 415 aa14.1□□□□□ -0.15
VPS29-211ENST00000553128 PPP2R5AQ15172 486 aa14.1□□□□□ -0.15
VPS29-211ENST00000553128 ECM1Q16610 540 aa14.1□□□□□ -0.15
VPS29-211ENST00000553128 UAP1L1Q3KQV9 507 aa14.1□□□□□ -0.15
VPS29-211ENST00000553128 RPLP0P6Q8NHW5 317 aa14.1□□□□□ -0.15
VPS29-211ENST00000553128 ZBTB45Q96K62 511 aaPredicted RBP14.1□□□□□ -0.15
VPS29-211ENST00000553128 IFT74Q96LB3 600 aa14.1□□□□□ -0.15
VPS29-211ENST00000553128 ACAP3Q96P50 834 aa14.1□□□□□ -0.15
VPS29-211ENST00000553128 SLC46A2Q9BY10 475 aa14.1□□□□□ -0.15
VPS29-211ENST00000553128 TASP1Q9H6P5 420 aa14.1□□□□□ -0.15
VPS29-211ENST00000553128 IL21Q9HBE4 155 aa14.1□□□□□ -0.15
VPS29-211ENST00000553128 STK36Q9NRP7 1315 aa14.1□□□□□ -0.15
VPS29-211ENST00000553128 ANTXRLA6NF34 631 aa14.09□□□□□ -0.15
VPS29-211ENST00000553128 ZIC2O95409 532 aaPredicted RBP14.09□□□□□ -0.15
VPS29-211ENST00000553128 LARGE1O95461 756 aa14.09□□□□□ -0.15
VPS29-211ENST00000553128 FDPSP14324 419 aaKnown RBP14.09□□□□□ -0.15
VPS29-211ENST00000553128 XBP1P17861 261 aa14.09□□□□□ -0.15
VPS29-211ENST00000553128 BCKDHBP21953 392 aa14.09□□□□□ -0.15
VPS29-211ENST00000553128 PROZP22891 400 aa14.09□□□□□ -0.15
VPS29-211ENST00000553128 GBP1P32455 592 aa14.09□□□□□ -0.15
VPS29-211ENST00000553128 GALK1P51570 392 aa14.09□□□□□ -0.15
VPS29-211ENST00000553128 IRX4P78413 519 aa14.09□□□□□ -0.15
VPS29-211ENST00000553128 SLC10A6Q3KNW5 377 aa14.09□□□□□ -0.15
VPS29-211ENST00000553128 PMS2CLQ68D20 193 aa14.09□□□□□ -0.15
VPS29-211ENST00000553128 APBB1IPQ7Z5R6 666 aaPredicted RBP14.09□□□□□ -0.15
VPS29-211ENST00000553128 TPSD1Q9BZJ3 242 aa14.09□□□□□ -0.15
VPS29-211ENST00000553128 TPCN1Q9ULQ1 816 aa14.09□□□□□ -0.15
VPS29-211ENST00000553128 CYP46A1Q9Y6A2 500 aa14.09□□□□□ -0.15
VPS29-211ENST00000553128 ABCA7Q8IZY2 2146 aa14.08□□□□□ -0.16
VPS29-211ENST00000553128 CCDC169A6NNP5 214 aa14.08□□□□□ -0.16
VPS29-211ENST00000553128 BTBD18B2RXH4 712 aa14.08□□□□□ -0.16
VPS29-211ENST00000553128 KHNYNO15037 678 aaKnown RBP14.08□□□□□ -0.16
VPS29-211ENST00000553128 MCF2P10911 925 aa14.08□□□□□ -0.16
VPS29-211ENST00000553128 WEE1P30291 646 aa14.08□□□□□ -0.16
VPS29-211ENST00000553128 NPTX2P47972 431 aa14.08□□□□□ -0.16
VPS29-211ENST00000553128 GUCY2FP51841 1108 aa14.08□□□□□ -0.16
VPS29-211ENST00000553128 DMC1Q14565 340 aa14.08□□□□□ -0.16
VPS29-211ENST00000553128 SOWAHCQ53LP3 525 aaPredicted RBP14.08□□□□□ -0.16
VPS29-211ENST00000553128 ARHGAP15Q53QZ3 475 aa14.08□□□□□ -0.16
VPS29-211ENST00000553128 THG1LQ9NWX6 298 aaKnown RBP14.08□□□□□ -0.16
VPS29-211ENST00000553128 EBF1Q9UH73 591 aa14.08□□□□□ -0.16
VPS29-211ENST00000553128 NEUROG3Q9Y4Z2 214 aa14.08□□□□□ -0.16
VPS29-211ENST00000553128 ASB3Q9Y575 518 aa14.08□□□□□ -0.16
VPS29-211ENST00000553128 PHLPP2Q6ZVD8 1323 aa14.08□□□□□ -0.16
VPS29-211ENST00000553128 BPTFQ12830 3046 aa14.07□□□□□ -0.16
VPS29-211ENST00000553128 SPAARA0A1B0GVQ0 90 aa14.07□□□□□ -0.16
VPS29-211ENST00000553128 PPEF2O14830 753 aa14.07□□□□□ -0.16
VPS29-211ENST00000553128 CDKL5O76039 1030 aa14.07□□□□□ -0.16
VPS29-211ENST00000553128 APBB3O95704 486 aa14.07□□□□□ -0.16
VPS29-211ENST00000553128 CAPNS1P04632 268 aa14.07□□□□□ -0.16
VPS29-211ENST00000553128 ATF6P18850 670 aa14.07□□□□□ -0.16
VPS29-211ENST00000553128 RPA1P27694 616 aa14.07□□□□□ -0.16
VPS29-211ENST00000553128 NMT1P30419 496 aaKnown RBP14.07□□□□□ -0.16
VPS29-211ENST00000553128 AARSP49588 968 aaKnown RBP eCLIP14.07□□□□□ -0.16
VPS29-211ENST00000553128 DGKEP52429 567 aa14.07□□□□□ -0.16
VPS29-211ENST00000553128 FOSBP53539 338 aa14.07□□□□□ -0.16
VPS29-211ENST00000553128 PEX3P56589 373 aa14.07□□□□□ -0.16
VPS29-211ENST00000553128 KARSQ15046 597 aaKnown RBP14.07□□□□□ -0.16
VPS29-211ENST00000553128 C19orf48Q6RUI8 117 aa14.07□□□□□ -0.16
VPS29-211ENST00000553128 SYT13Q7L8C5 426 aa14.07□□□□□ -0.16
VPS29-211ENST00000553128 TMEM150AQ86TG1 271 aa14.07□□□□□ -0.16
VPS29-211ENST00000553128 CMTM8Q8IZV2 173 aa14.07□□□□□ -0.16
VPS29-211ENST00000553128 DAW1Q8N136 415 aa14.07□□□□□ -0.16
VPS29-211ENST00000553128 USP13Q92995 863 aaPredicted RBP14.07□□□□□ -0.16
VPS29-211ENST00000553128 TCHPQ9BT92 498 aa14.07□□□□□ -0.16
VPS29-211ENST00000553128 MRPL4Q9BYD3 311 aaKnown RBP14.07□□□□□ -0.16
VPS29-211ENST00000553128 BHMT2Q9H2M3 363 aa14.07□□□□□ -0.16
VPS29-211ENST00000553128 ORC3Q9UBD5 711 aaPredicted RBP14.07□□□□□ -0.16
VPS29-211ENST00000553128 MSRB2Q9Y3D2 182 aa14.07□□□□□ -0.16
VPS29-211ENST00000553128 NUP205Q92621 2012 aa14.07□□□□□ -0.16
VPS29-211ENST00000553128 OR6C75A6NL08 312 aa14.06□□□□□ -0.16
VPS29-211ENST00000553128 MCM7P33993 719 aa14.06□□□□□ -0.16
VPS29-211ENST00000553128 PTPAQ15257 358 aa14.06□□□□□ -0.16
VPS29-211ENST00000553128 OVOS1Q6IE37 1185 aa14.06□□□□□ -0.16
VPS29-211ENST00000553128 MPZL3Q6UWV2 235 aa14.06□□□□□ -0.16
VPS29-211ENST00000553128 OR10T2Q8NGX3 314 aa14.06□□□□□ -0.16
VPS29-211ENST00000553128 GIPC2Q8TF65 315 aa14.06□□□□□ -0.16
VPS29-211ENST00000553128 KIFAP3Q92845 792 aa14.06□□□□□ -0.16
VPS29-211ENST00000553128 SEPT5Q99719 369 aaPredicted RBP14.06□□□□□ -0.16
VPS29-211ENST00000553128 P2RY13Q9BPV8 354 aa14.06□□□□□ -0.16
VPS29-211ENST00000553128 HAPLN2Q9GZV7 340 aa14.06□□□□□ -0.16
VPS29-211ENST00000553128 PDRG1Q9NUG6 133 aa14.06□□□□□ -0.16
VPS29-211ENST00000553128 ARHGAP28Q9P2N2 729 aa14.06□□□□□ -0.16
VPS29-211ENST00000553128 TBX20Q9UMR3 447 aa14.06□□□□□ -0.16
VPS29-211ENST00000553128 CITO14578 2027 aa14.05□□□□□ -0.16
VPS29-211ENST00000553128 ASCC3Q8N3C0 2202 aaKnown RBP14.05□□□□□ -0.16
VPS29-211ENST00000553128 PFKFB2O60825 505 aa14.05□□□□□ -0.16
VPS29-211ENST00000553128 FGF19O95750 216 aa14.05□□□□□ -0.16
VPS29-211ENST00000553128 CXCL8P10145 99 aa14.05□□□□□ -0.16
VPS29-211ENST00000553128 DRD1P21728 446 aa14.05□□□□□ -0.16
VPS29-211ENST00000553128 LRPAP1P30533 357 aa14.05□□□□□ -0.16
VPS29-211ENST00000553128 GJA4P35212 333 aa14.05□□□□□ -0.16
VPS29-211ENST00000553128 MAPK8P45983 427 aa14.05□□□□□ -0.16
VPS29-211ENST00000553128 FAM193AP78312 1265 aa14.05□□□□□ -0.16
VPS29-211ENST00000553128 MYBPC2Q14324 1141 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms