RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 TMEM40Q8WWA1 233 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 BCO2Q9BYV7 579 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 ARHGAP39Q9C0H5 1083 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 NXF3Q9H4D5 531 aaKnown RBP9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 SYNCQ9H7C4 482 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 GJD2Q9UKL4 321 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 MTUS1Q9ULD2 1270 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 PTPN22Q9Y2R2 807 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 C2CD2Q9Y426 696 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 C17orf102A2RUQ5 167 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 GOLGA8SH3BPF8 625 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 MED7O43513 233 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 PHF2O75151 1096 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 AKR1A1P14550 325 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 DARSP14868 501 aaKnown RBP9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 HSPA6P17066 643 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 EIF4BP23588 611 aaKnown RBP9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 AKAP5P24588 427 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 SLC1A1P43005 524 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 RAD23BP54727 409 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 CUL1Q13616 776 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 DENND1BQ6P3S1 775 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 CCDC137Q6PK04 289 aaKnown RBP9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 APBB1IPQ7Z5R6 666 aaPredicted RBP9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 CCDC105Q8IYK2 499 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 ZDHHC14Q8IZN3 488 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 GOLGA6L1Q8N7Z2 621 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 PRELID2Q8N945 189 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 FEZF2Q8TBJ5 459 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 CAVIN3Q969G5 261 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 KATNAL1Q9BW62 490 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 RAB17Q9H0T7 212 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 MED4Q9NPJ6 270 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 KLHL11Q9NVR0 708 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 ITGA11Q9UKX5 1188 aa9.64□□□□□ -0.87
RAB3IP-218ENST00000553099 MYADML2A6NDP7 307 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 M0QYV0 167 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 HSF2BPO75031 334 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 RNF40O75150 1001 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 ATICP31939 592 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 RBP5P82980 135 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 CDC42EP1Q00587 391 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 PTPN11Q06124 597 aaPredicted RBP9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 SNX17Q15036 470 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 TERF2Q15554 542 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 PPP2R5EQ16537 467 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 SLC4A11Q8NBS3 891 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 CXorf38Q8TB03 319 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 FAM71BQ8TC56 605 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 WHAMMQ8TF30 809 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 HEXIM2Q96MH2 286 aaKnown RBP9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 NEUROG2Q9H2A3 272 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 KLK14Q9P0G3 267 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 TJP2Q9UDY2 1190 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 TUBGCP4Q9UGJ1 667 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 FAM155AB1AL88 458 aaPredicted RBP9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 CILPO75339 1184 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 RECQL4O94761 1208 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 CHRNA3P32297 505 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 PSMC4P43686 418 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 KCNJ1P48048 391 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 TAS2R40P59535 323 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 POU5F1Q01860 360 aaKnown RBP9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 MYO1EQ12965 1108 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 PTPN20Q4JDL3 420 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 GNASQ5JWF2 1037 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 JAMLQ86YT9 394 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 WDTC1Q8N5D0 677 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 C1orf54Q8WWF1 131 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 C18orf25Q96B23 403 aaPredicted RBP9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 TMEM176AQ96HP8 235 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 ZMAT2Q96NC0 199 aaKnown RBP9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 HEMGNQ9BXL5 484 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 ZNF518BQ9C0D4 1074 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 ELOVL4Q9GZR5 314 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 PARP2Q9UGN5 583 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 RASAL2Q9UJF2 1139 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 PCDHGC3Q9UN70 934 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 SNX9Q9Y5X1 595 aa9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 PDCD11Q14690 1871 aaKnown RBP9.63□□□□□ -0.87
RAB3IP-218ENST00000553099 DCAF8L1A6NGE4 600 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 AGPSO00116 658 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 HAS3O00219 553 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 PPEF2O14830 753 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 SYF2O95926 243 aaKnown RBP9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 PGK1P00558 417 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 PAEPP09466 180 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 RARAP10276 462 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 ECHS1P30084 290 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 AARSP49588 968 aaKnown RBP eCLIP9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 NDST1P52848 882 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 PURAQ00577 322 aaKnown RBP9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 NNTQ13423 1086 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 IRF5Q13568 498 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 SNX1Q13596 522 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 DHX34Q14147 1143 aaKnown RBP9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 SGO2Q562F6 1265 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 ODF2Q5BJF6 829 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 FAM47CQ5HY64 1035 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 CFAP58Q5T655 872 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms