RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 ITGA11Q9UKX5 1188 aa9.47□□□□□ -0.89
TMEM116-209ENST00000550020 USTQ9Y2C2 406 aa9.47□□□□□ -0.89
TMEM116-209ENST00000550020 UMODL1Q5DID0 1318 aa9.47□□□□□ -0.89
TMEM116-209ENST00000550020 DICER1Q9UPY3 1922 aaKnown RBP9.46□□□□□ -0.89
TMEM116-209ENST00000550020 PAPPA2Q9BXP8 1791 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 A0A087WUV0 522 aaPredicted RBP9.46□□□□□ -0.9
TMEM116-209ENST00000550020 RBM47A0AV96 593 aaKnown RBP9.46□□□□□ -0.9
TMEM116-209ENST00000550020 RRN3P2A6NIE6 340 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 SIGLEC16A6NMB1 481 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 ZBTB42B2RXF5 422 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 MYO1CO00159 1063 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 ABLIM1O14639 778 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 TCEA3O75764 348 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 C22orf31O95567 290 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 STAU1O95793 577 aaKnown RBP9.46□□□□□ -0.9
TMEM116-209ENST00000550020 CST3P01034 146 aaPredicted RBP9.46□□□□□ -0.9
TMEM116-209ENST00000550020 HMGCRP04035 888 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 KRT19P08727 400 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 CD19P15391 556 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 CD58P19256 250 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 MAGEA9P43362 315 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 ASPAP45381 313 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 GTF2A2P52657 109 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 WNT7BP56706 349 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 CORO7P57737 925 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 FKBP1BP68106 108 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 RBP5P82980 135 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 GUCY1A3Q02108 690 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 KLF1Q13351 362 aaPredicted RBP9.46□□□□□ -0.9
TMEM116-209ENST00000550020 MKRN4PQ13434 485 aaPredicted RBP9.46□□□□□ -0.9
TMEM116-209ENST00000550020 DRP2Q13474 957 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 IRF5Q13568 498 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 SNX1Q13596 522 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 SLC29A2Q14542 456 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 ZNF268Q14587 947 aaPredicted RBP9.46□□□□□ -0.9
TMEM116-209ENST00000550020 STAT4Q14765 748 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 DCAF4L1Q3SXM0 396 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 EAPPQ56P03 285 aaPredicted RBP9.46□□□□□ -0.9
TMEM116-209ENST00000550020 TFDP3Q5H9I0 405 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 LDLRAD1Q5T700 205 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 ARMCX2Q7L311 632 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 ZNF410Q86VK4 478 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 FBXO16Q8IX29 292 aaPredicted RBP9.46□□□□□ -0.9
TMEM116-209ENST00000550020 RIBC1Q8N443 379 aaPredicted RBP9.46□□□□□ -0.9
TMEM116-209ENST00000550020 OR2W6PQ8NHA6 318 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 ZNF473Q8WTR7 871 aaKnown RBP9.46□□□□□ -0.9
TMEM116-209ENST00000550020 C1orf54Q8WWF1 131 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 CLMNQ96JQ2 1002 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 FGD4Q96M96 766 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 TSPAN18Q96SJ8 248 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 BCO2Q9BYV7 579 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 SLC12A6Q9UHW9 1150 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 DERAQ9Y315 318 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 C2CD2Q9Y426 696 aa9.46□□□□□ -0.9
TMEM116-209ENST00000550020 KIAA1217Q5T5P2 1943 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 TCRBV7S2A1N4TA0A589 114 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 TLDC2A0PJX2 215 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 TRAPPC3O43617 180 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 RNF8O76064 485 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 TTC4O95801 387 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 LGALS2P05162 132 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 ABHD2P08910 425 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 STAG3L1P0CL83 205 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 VDRP11473 427 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 KRT3P12035 628 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 INSRRP14616 1297 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 BRD2P25440 801 aaKnown RBP9.45□□□□□ -0.9
TMEM116-209ENST00000550020 KCNJ1P48048 391 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 ARHGAP1Q07960 439 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 MYO1EQ12965 1108 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 MOGSQ13724 837 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 TMEM132DQ14C87 1099 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 ZNF792Q3KQV3 632 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 SEZ6Q53EL9 994 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 GKAP1Q5VSY0 366 aaPredicted RBP9.45□□□□□ -0.9
TMEM116-209ENST00000550020 C9orf131Q5VYM1 1079 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 SPOCD1Q6ZMY3 1216 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 CPLX4Q7Z7G2 160 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 ANKRD23Q86SG2 305 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 CCDC25Q86WR0 208 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 TRIM50Q86XT4 487 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 OTUD6BQ8N6M0 293 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 ANKS4BQ8N8V4 417 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 MYCBPAPQ8TBZ2 947 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 AFG1LQ8WV93 481 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 NKD2Q969F2 451 aaPredicted RBP9.45□□□□□ -0.9
TMEM116-209ENST00000550020 RNF25Q96BH1 459 aaPredicted RBP9.45□□□□□ -0.9
TMEM116-209ENST00000550020 CFAP57Q96MR6 1250 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 MCEEQ96PE7 176 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 SLITRK1Q96PX8 696 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 CCT8L2Q96SF2 557 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 PHACTR1Q9C0D0 580 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 XYLT2Q9H1B5 865 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 SEMA4AQ9H3S1 761 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 PLEKHA5Q9HAU0 1116 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 IFT122Q9HBG6 1241 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 TXNRD2Q9NNW7 524 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 ASNSD1Q9NWL6 643 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 ZNF148Q9UQR1 794 aa9.45□□□□□ -0.9
TMEM116-209ENST00000550020 AKT3Q9Y243 479 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms