RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 PEX3P56589 373 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 HMGN5P82970 282 aaKnown RBP9.25□□□□□ -0.93
TROAP-208ENST00000548817 PLCB2Q00722 1185 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 STRN3Q13033 797 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 SEMA3BQ13214 749 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 PON2Q15165 354 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 PTPAQ15257 358 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 UAP1L1Q3KQV9 507 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 KRT79Q5XKE5 535 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 TPGS2Q68CL5 300 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 PMS2CLQ68D20 193 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 CYP2U1Q7Z449 544 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 CCDC83Q8IWF9 413 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 LSM14AQ8ND56 463 aaKnown RBP9.25□□□□□ -0.93
TROAP-208ENST00000548817 APPL2Q8NEU8 664 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 SNX29Q8TEQ0 813 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 TCEAL4Q96EI5 215 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 ZSCAN31Q96LW9 406 aaPredicted RBP9.25□□□□□ -0.93
TROAP-208ENST00000548817 DRC1Q96MC2 740 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 ZSWIM3Q96MP5 696 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 ACO2Q99798 780 aaKnown RBP9.25□□□□□ -0.93
TROAP-208ENST00000548817 LLPHQ9BRT6 129 aaKnown RBP9.25□□□□□ -0.93
TROAP-208ENST00000548817 CXCL16Q9H2A7 254 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 TMEM134Q9H6X4 195 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 GOLGA2P5Q9HBQ8 144 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 DDX19AQ9NUU7 478 aaKnown RBP9.25□□□□□ -0.93
TROAP-208ENST00000548817 OBP2AQ9NY56 170 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 DKK4Q9UBT3 224 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 MAFFQ9ULX9 164 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 CELSR3Q9NYQ7 3312 aa9.25□□□□□ -0.93
TROAP-208ENST00000548817 SPAARA0A1B0GVQ0 90 aa9.24□□□□□ -0.93
TROAP-208ENST00000548817 NRG2O14511 850 aaPredicted RBP9.24□□□□□ -0.93
TROAP-208ENST00000548817 APBB3O95704 486 aa9.24□□□□□ -0.93
TROAP-208ENST00000548817 MCF2P10911 925 aa9.24□□□□□ -0.93
TROAP-208ENST00000548817 HARSP12081 509 aaKnown RBP9.24□□□□□ -0.93
TROAP-208ENST00000548817 PLA2G2AP14555 144 aa9.24□□□□□ -0.93
TROAP-208ENST00000548817 ATF2P15336 505 aa9.24□□□□□ -0.93
TROAP-208ENST00000548817 HOXC13P31276 330 aa9.24□□□□□ -0.93
TROAP-208ENST00000548817 MCM4P33991 863 aa9.24□□□□□ -0.93
TROAP-208ENST00000548817 CCR2P41597 374 aa9.24□□□□□ -0.93
TROAP-208ENST00000548817 NPTX2P47972 431 aa9.24□□□□□ -0.93
TROAP-208ENST00000548817 SMTNP53814 917 aa9.24□□□□□ -0.93
TROAP-208ENST00000548817 ROR1Q01973 937 aa9.24□□□□□ -0.93
TROAP-208ENST00000548817 CTXN3Q4LDR2 81 aa9.24□□□□□ -0.93
TROAP-208ENST00000548817 ZNF280DQ6N043 979 aa9.24□□□□□ -0.93
TROAP-208ENST00000548817 CHCHD4Q8N4Q1 142 aa9.24□□□□□ -0.93
TROAP-208ENST00000548817 LRIG1Q96JA1 1093 aa9.24□□□□□ -0.93
TROAP-208ENST00000548817 TMEM209Q96SK2 561 aa9.24□□□□□ -0.93
TROAP-208ENST00000548817 CDT1Q9H211 546 aa9.24□□□□□ -0.93
TROAP-208ENST00000548817 C17orf75Q9HAS0 396 aa9.24□□□□□ -0.93
TROAP-208ENST00000548817 INSL5Q9Y5Q6 135 aa9.24□□□□□ -0.93
TROAP-208ENST00000548817 NCANO14594 1321 aa9.24□□□□□ -0.93
TROAP-208ENST00000548817 CITO14578 2027 aa9.24□□□□□ -0.93
TROAP-208ENST00000548817 CAPN8A6NHC0 703 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 CYSRT1A8MQ03 144 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 MEFVO15553 781 aaPredicted RBP9.23□□□□□ -0.93
TROAP-208ENST00000548817 HIP1RO75146 1068 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 MOSPD3O75425 235 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 EDN1P05305 212 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 CPB1P15086 417 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 KCNE1P15382 129 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 GBP1P32455 592 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 IRX4P78413 519 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 GRSF1Q12849 480 aaKnown RBP eCLIP9.23□□□□□ -0.93
TROAP-208ENST00000548817 ZRSR1Q15695 479 aaKnown RBP9.23□□□□□ -0.93
TROAP-208ENST00000548817 FBXO43Q4G163 708 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 TMEM196Q5HYL7 178 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 PKN3Q6P5Z2 889 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 MPZL3Q6UWV2 235 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 DTHD1Q6ZMT9 781 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 SYT13Q7L8C5 426 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 USP37Q86T82 979 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 LURAP1LQ8IV03 231 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 FBXO18Q8NFZ0 1043 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 HNRNPLLQ8WVV9 542 aaKnown RBP9.23□□□□□ -0.93
TROAP-208ENST00000548817 ADAMTS14Q8WXS8 1223 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 TIPINQ9BVW5 301 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 TARS2Q9BW92 718 aaKnown RBP9.23□□□□□ -0.93
TROAP-208ENST00000548817 NUSAP1Q9BXS6 441 aaKnown RBP9.23□□□□□ -0.93
TROAP-208ENST00000548817 SLITRK6Q9H5Y7 841 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 ASAH2Q9NR71 780 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 FBXL5Q9UKA1 691 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 KIF3AQ9Y496 699 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 RAI2Q9Y5P3 530 aa9.23□□□□□ -0.93
TROAP-208ENST00000548817 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.23□□□□□ -0.93
TROAP-208ENST00000548817 NUP210Q8TEM1 1887 aaPredicted RBP9.23□□□□□ -0.93
TROAP-208ENST00000548817 URB1O60287 2271 aaKnown RBP9.22□□□□□ -0.93
TROAP-208ENST00000548817 E9PMD0 336 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 H0YCG3 227 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 LAD1O00515 517 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 SLC16A4O15374 487 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 CLDN3O15551 220 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 XPOTO43592 962 aaKnown RBP9.22□□□□□ -0.93
TROAP-208ENST00000548817 MYL4P12829 197 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 HOXD12P35452 270 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 AMPD2Q01433 879 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 SOX4Q06945 474 aaPredicted RBP9.22□□□□□ -0.93
TROAP-208ENST00000548817 PLD1Q13393 1074 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 ECM1Q16610 540 aa9.22□□□□□ -0.93
TROAP-208ENST00000548817 ITPRIPL2Q3MIP1 535 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms