RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 SMAD4Q13485 552 aaKnown RBP18.03■□□□□ 0.48
CCDC38-203ENST00000546803 UVSSAQ2YD98 709 aa18.03■□□□□ 0.48
CCDC38-203ENST00000546803 LIN9Q5TKA1 542 aa18.03■□□□□ 0.48
CCDC38-203ENST00000546803 TRIM59Q8IWR1 403 aa18.03■□□□□ 0.48
CCDC38-203ENST00000546803 ADGRF2Q8IZF7 708 aa18.03■□□□□ 0.48
CCDC38-203ENST00000546803 SMRP1Q8NCR6 262 aa18.03■□□□□ 0.48
CCDC38-203ENST00000546803 CCDC150Q8NCX0 1101 aa18.03■□□□□ 0.48
CCDC38-203ENST00000546803 FBXL13Q8NEE6 735 aa18.03■□□□□ 0.48
CCDC38-203ENST00000546803 CMASQ8NFW8 434 aaPredicted RBP18.03■□□□□ 0.48
CCDC38-203ENST00000546803 TAS1R2Q8TE23 839 aa18.03■□□□□ 0.48
CCDC38-203ENST00000546803 ASB2Q96Q27 587 aa18.03■□□□□ 0.48
CCDC38-203ENST00000546803 MMS19Q96T76 1030 aa18.03■□□□□ 0.48
CCDC38-203ENST00000546803 S1PR5Q9H228 398 aa18.03■□□□□ 0.48
CCDC38-203ENST00000546803 THAP9Q9H5L6 903 aa18.03■□□□□ 0.48
CCDC38-203ENST00000546803 MMRN2Q9H8L6 949 aa18.03■□□□□ 0.48
CCDC38-203ENST00000546803 NXF1Q9UBU9 619 aaKnown RBP18.03■□□□□ 0.48
CCDC38-203ENST00000546803 AFF4Q9UHB7 1163 aaKnown RBP18.03■□□□□ 0.48
CCDC38-203ENST00000546803 MYO7AQ13402 2215 aa18.02■□□□□ 0.48
CCDC38-203ENST00000546803 WDR27A2RRH5 827 aa18.02■□□□□ 0.48
CCDC38-203ENST00000546803 PMM2O15305 246 aa18.02■□□□□ 0.48
CCDC38-203ENST00000546803 N4BP1O75113 896 aaKnown RBP18.02■□□□□ 0.48
CCDC38-203ENST00000546803 CLSTN1O94985 981 aa18.02■□□□□ 0.48
CCDC38-203ENST00000546803 ATF2P15336 505 aa18.02■□□□□ 0.48
CCDC38-203ENST00000546803 ANK1P16157 1881 aa18.02■□□□□ 0.48
CCDC38-203ENST00000546803 WARSP23381 471 aaKnown RBP18.02■□□□□ 0.48
CCDC38-203ENST00000546803 PCSK1P29120 753 aa18.02■□□□□ 0.48
CCDC38-203ENST00000546803 ELF1P32519 619 aa18.02■□□□□ 0.48
CCDC38-203ENST00000546803 SMARCB1Q12824 385 aa18.02■□□□□ 0.48
CCDC38-203ENST00000546803 CES5AQ6NT32 575 aa18.02■□□□□ 0.48
CCDC38-203ENST00000546803 CYP26C1Q6V0L0 522 aa18.02■□□□□ 0.48
CCDC38-203ENST00000546803 CCDC149Q6ZUS6 474 aa18.02■□□□□ 0.48
CCDC38-203ENST00000546803 FAM114A1Q8IWE2 563 aa18.02■□□□□ 0.48
CCDC38-203ENST00000546803 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.02■□□□□ 0.48
CCDC38-203ENST00000546803 ENOX1Q8TC92 643 aaKnown RBP18.02■□□□□ 0.48
CCDC38-203ENST00000546803 RTP3Q9BQQ7 232 aa18.02■□□□□ 0.48
CCDC38-203ENST00000546803 ACBD6Q9BR61 282 aa18.02■□□□□ 0.48
CCDC38-203ENST00000546803 RHOBTB2Q9BYZ6 727 aa18.02■□□□□ 0.48
CCDC38-203ENST00000546803 ZCWPW1Q9H0M4 648 aa18.02■□□□□ 0.48
CCDC38-203ENST00000546803 ADAM7Q9H2U9 754 aa18.02■□□□□ 0.48
CCDC38-203ENST00000546803 RAB20Q9NX57 234 aa18.02■□□□□ 0.48
CCDC38-203ENST00000546803 ZDHHC7Q9NXF8 308 aa18.02■□□□□ 0.48
CCDC38-203ENST00000546803 DDX43Q9NXZ2 648 aaKnown RBP18.02■□□□□ 0.48
CCDC38-203ENST00000546803 COQ4Q9Y3A0 265 aa18.02■□□□□ 0.48
CCDC38-203ENST00000546803 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.02■□□□□ 0.48
CCDC38-203ENST00000546803 P4HA2O15460 535 aa18.01■□□□□ 0.47
CCDC38-203ENST00000546803 ZMYND10O75800 440 aa18.01■□□□□ 0.47
CCDC38-203ENST00000546803 PAPLNO95428 1278 aa18.01■□□□□ 0.47
CCDC38-203ENST00000546803 SPATA31D3P0C874 917 aa18.01■□□□□ 0.47
CCDC38-203ENST00000546803 HOXA9P31269 272 aa18.01■□□□□ 0.47
CCDC38-203ENST00000546803 TSPY1Q01534 308 aa18.01■□□□□ 0.47
CCDC38-203ENST00000546803 TYRO3Q06418 890 aa18.01■□□□□ 0.47
CCDC38-203ENST00000546803 CETN1Q12798 172 aa18.01■□□□□ 0.47
CCDC38-203ENST00000546803 CLUL1Q15846 466 aa18.01■□□□□ 0.47
CCDC38-203ENST00000546803 CBWD6Q4V339 395 aa18.01■□□□□ 0.47
CCDC38-203ENST00000546803 CBWD3Q5JTY5 395 aa18.01■□□□□ 0.47
CCDC38-203ENST00000546803 CBWD5Q5RIA9 395 aa18.01■□□□□ 0.47
CCDC38-203ENST00000546803 SPATA31D4Q6ZUB0 917 aa18.01■□□□□ 0.47
CCDC38-203ENST00000546803 DCP1BQ8IZD4 617 aaKnown RBP18.01■□□□□ 0.47
CCDC38-203ENST00000546803 OR10T2Q8NGX3 314 aa18.01■□□□□ 0.47
CCDC38-203ENST00000546803 FAXDC2Q96IV6 333 aa18.01■□□□□ 0.47
CCDC38-203ENST00000546803 CNOT6LQ96LI5 555 aaKnown RBP18.01■□□□□ 0.47
CCDC38-203ENST00000546803 GRXCR2A6NFK2 248 aa18■□□□□ 0.47
CCDC38-203ENST00000546803 MBTPS2O43462 519 aa18■□□□□ 0.47
CCDC38-203ENST00000546803 C8AP07357 584 aa18■□□□□ 0.47
CCDC38-203ENST00000546803 HNRNPA1P09651 372 aaKnown RBP eCLIP18■□□□□ 0.47
CCDC38-203ENST00000546803 FMO5P49326 533 aa18■□□□□ 0.47
CCDC38-203ENST00000546803 NOP14P78316 857 aaKnown RBP18■□□□□ 0.47
CCDC38-203ENST00000546803 WDR44Q5JSH3 913 aa18■□□□□ 0.47
CCDC38-203ENST00000546803 PPM1LQ5SGD2 360 aa18■□□□□ 0.47
CCDC38-203ENST00000546803 RARS2Q5T160 578 aaKnown RBP18■□□□□ 0.47
CCDC38-203ENST00000546803 PTCRAQ6ISU1 281 aaPredicted RBP18■□□□□ 0.47
CCDC38-203ENST00000546803 OSTM1Q86WC4 334 aa18■□□□□ 0.47
CCDC38-203ENST00000546803 IRF2BP1Q8IU81 584 aa18■□□□□ 0.47
CCDC38-203ENST00000546803 TCEAL8Q8IYN2 117 aa18■□□□□ 0.47
CCDC38-203ENST00000546803 C12orf76Q8N812 135 aaPredicted RBP18■□□□□ 0.47
CCDC38-203ENST00000546803 C2orf15Q8WU43 125 aaKnown RBP18■□□□□ 0.47
CCDC38-203ENST00000546803 KBTBD7Q8WVZ9 684 aa18■□□□□ 0.47
CCDC38-203ENST00000546803 SNX25Q9H3E2 840 aa18■□□□□ 0.47
CCDC38-203ENST00000546803 HSFX1Q9UBD0 423 aa18■□□□□ 0.47
CCDC38-203ENST00000546803 MAGEC2Q9UBF1 373 aaPredicted RBP18■□□□□ 0.47
CCDC38-203ENST00000546803 TRANK1O15050 2925 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 CCDC195A0A1B0GUA6 201 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 PRRG1O14668 218 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 AFPP02771 609 aaKnown RBP17.99■□□□□ 0.47
CCDC38-203ENST00000546803 POU2F2P09086 479 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 OR4Q2P0C623 313 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 GNL1P36915 607 aaPredicted RBP17.99■□□□□ 0.47
CCDC38-203ENST00000546803 MTHFRP42898 656 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 ADCY1Q08828 1119 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 KCNH2Q12809 1159 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 NFE2Q16621 373 aaPredicted RBP17.99■□□□□ 0.47
CCDC38-203ENST00000546803 ATAT1Q5SQI0 421 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 TMC5Q6UXY8 1006 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 RNF19BQ6ZMZ0 732 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 GPR149Q86SP6 731 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 CREBRFQ8IUR6 639 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 SLC7A14Q8TBB6 771 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 SUSD6Q92537 303 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 SEMA4DQ92854 862 aa17.99■□□□□ 0.47
CCDC38-203ENST00000546803 RIPOR3Q96MK2 946 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms