RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 P4HA1P13674 534 aa18.04■□□□□ 0.48
LTBR-215ENST00000546296 LHX1P48742 406 aa18.04■□□□□ 0.48
LTBR-215ENST00000546296 KCNQ1P51787 676 aa18.04■□□□□ 0.48
LTBR-215ENST00000546296 MCCD1P59942 119 aaPredicted RBP18.04■□□□□ 0.48
LTBR-215ENST00000546296 MYL7Q01449 175 aa18.04■□□□□ 0.48
LTBR-215ENST00000546296 STX1AQ16623 288 aa18.04■□□□□ 0.48
LTBR-215ENST00000546296 SOWAHAQ2M3V2 549 aa18.04■□□□□ 0.48
LTBR-215ENST00000546296 ZNF667Q5HYK9 610 aa18.04■□□□□ 0.48
LTBR-215ENST00000546296 TPGS2Q68CL5 300 aa18.04■□□□□ 0.48
LTBR-215ENST00000546296 TMC5Q6UXY8 1006 aa18.04■□□□□ 0.48
LTBR-215ENST00000546296 TAS1R2Q8TE23 839 aa18.04■□□□□ 0.48
LTBR-215ENST00000546296 TAF4BQ92750 862 aa18.04■□□□□ 0.48
LTBR-215ENST00000546296 XYLT2Q9H1B5 865 aa18.04■□□□□ 0.48
LTBR-215ENST00000546296 SNX25Q9H3E2 840 aa18.04■□□□□ 0.48
LTBR-215ENST00000546296 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.04■□□□□ 0.48
LTBR-215ENST00000546296 DDX43Q9NXZ2 648 aaKnown RBP18.04■□□□□ 0.48
LTBR-215ENST00000546296 WDR27A2RRH5 827 aa18.03■□□□□ 0.48
LTBR-215ENST00000546296 PRRG1O14668 218 aa18.03■□□□□ 0.48
LTBR-215ENST00000546296 ABLIM3O94929 683 aa18.03■□□□□ 0.48
LTBR-215ENST00000546296 LETM1O95202 739 aaPredicted RBP18.03■□□□□ 0.48
LTBR-215ENST00000546296 TSPY1Q01534 308 aa18.03■□□□□ 0.48
LTBR-215ENST00000546296 ITIH3Q06033 890 aa18.03■□□□□ 0.48
LTBR-215ENST00000546296 SMAD4Q13485 552 aaKnown RBP18.03■□□□□ 0.48
LTBR-215ENST00000546296 SKOR2Q2VWA4 1001 aaPredicted RBP18.03■□□□□ 0.48
LTBR-215ENST00000546296 PPM1LQ5SGD2 360 aa18.03■□□□□ 0.48
LTBR-215ENST00000546296 CCDC149Q6ZUS6 474 aa18.03■□□□□ 0.48
LTBR-215ENST00000546296 DCP1BQ8IZD4 617 aaKnown RBP18.03■□□□□ 0.48
LTBR-215ENST00000546296 SPATA18Q8TC71 538 aa18.03■□□□□ 0.48
LTBR-215ENST00000546296 SLC35C1Q96A29 364 aa18.03■□□□□ 0.48
LTBR-215ENST00000546296 ELMO3Q96BJ8 720 aa18.03■□□□□ 0.48
LTBR-215ENST00000546296 MED15Q96RN5 788 aa18.03■□□□□ 0.48
LTBR-215ENST00000546296 TMEM209Q96SK2 561 aa18.03■□□□□ 0.48
LTBR-215ENST00000546296 PI4K2AQ9BTU6 479 aa18.03■□□□□ 0.48
LTBR-215ENST00000546296 S1PR5Q9H228 398 aa18.03■□□□□ 0.48
LTBR-215ENST00000546296 ADAM7Q9H2U9 754 aa18.03■□□□□ 0.48
LTBR-215ENST00000546296 VRTNQ9H8Y1 702 aa18.03■□□□□ 0.48
LTBR-215ENST00000546296 CYP4F11Q9HBI6 524 aa18.03■□□□□ 0.48
LTBR-215ENST00000546296 FBXW11Q9UKB1 542 aa18.03■□□□□ 0.48
LTBR-215ENST00000546296 POLIQ9UNA4 740 aa18.03■□□□□ 0.48
LTBR-215ENST00000546296 CCDC195A0A1B0GUA6 201 aa18.02■□□□□ 0.48
LTBR-215ENST00000546296 MBTPS2O43462 519 aa18.02■□□□□ 0.48
LTBR-215ENST00000546296 ZMYND10O75800 440 aa18.02■□□□□ 0.48
LTBR-215ENST00000546296 C8AP07357 584 aa18.02■□□□□ 0.48
LTBR-215ENST00000546296 ATF2P15336 505 aa18.02■□□□□ 0.48
LTBR-215ENST00000546296 PCSK1P29120 753 aa18.02■□□□□ 0.48
LTBR-215ENST00000546296 GNL1P36915 607 aaPredicted RBP18.02■□□□□ 0.48
LTBR-215ENST00000546296 ADCY1Q08828 1119 aa18.02■□□□□ 0.48
LTBR-215ENST00000546296 GPR17Q13304 367 aa18.02■□□□□ 0.48
LTBR-215ENST00000546296 SLC39A12Q504Y0 691 aa18.02■□□□□ 0.48
LTBR-215ENST00000546296 WDR44Q5JSH3 913 aa18.02■□□□□ 0.48
LTBR-215ENST00000546296 ATAT1Q5SQI0 421 aa18.02■□□□□ 0.48
LTBR-215ENST00000546296 RNF19BQ6ZMZ0 732 aa18.02■□□□□ 0.48
LTBR-215ENST00000546296 FAM114A1Q8IWE2 563 aa18.02■□□□□ 0.48
LTBR-215ENST00000546296 SMRP1Q8NCR6 262 aa18.02■□□□□ 0.48
LTBR-215ENST00000546296 FBXL13Q8NEE6 735 aa18.02■□□□□ 0.48
LTBR-215ENST00000546296 OR6B3Q8NGW1 331 aa18.02■□□□□ 0.48
LTBR-215ENST00000546296 OR10T2Q8NGX3 314 aa18.02■□□□□ 0.48
LTBR-215ENST00000546296 SLC7A14Q8TBB6 771 aa18.02■□□□□ 0.48
LTBR-215ENST00000546296 PGLYRP2Q96PD5 576 aa18.02■□□□□ 0.48
LTBR-215ENST00000546296 RTP3Q9BQQ7 232 aa18.02■□□□□ 0.48
LTBR-215ENST00000546296 ACBD6Q9BR61 282 aa18.02■□□□□ 0.48
LTBR-215ENST00000546296 ZCWPW1Q9H0M4 648 aa18.02■□□□□ 0.48
LTBR-215ENST00000546296 PIDD1Q9HB75 910 aa18.02■□□□□ 0.48
LTBR-215ENST00000546296 MAGEC2Q9UBF1 373 aaPredicted RBP18.02■□□□□ 0.48
LTBR-215ENST00000546296 AFF4Q9UHB7 1163 aaKnown RBP18.02■□□□□ 0.48
LTBR-215ENST00000546296 MAFFQ9ULX9 164 aa18.02■□□□□ 0.48
LTBR-215ENST00000546296 USP15Q9Y4E8 981 aaPredicted RBP18.02■□□□□ 0.48
LTBR-215ENST00000546296 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.02■□□□□ 0.48
LTBR-215ENST00000546296 VWA8A3KMH1 1905 aa18.02■□□□□ 0.47
LTBR-215ENST00000546296 SCN1AP35498 2009 aa18.01■□□□□ 0.47
LTBR-215ENST00000546296 GRXCR2A6NFK2 248 aa18.01■□□□□ 0.47
LTBR-215ENST00000546296 N4BP1O75113 896 aaKnown RBP18.01■□□□□ 0.47
LTBR-215ENST00000546296 TACC1O75410 805 aa18.01■□□□□ 0.47
LTBR-215ENST00000546296 RFPL2O75678 378 aa18.01■□□□□ 0.47
LTBR-215ENST00000546296 ASS1P00966 412 aaKnown RBP18.01■□□□□ 0.47
LTBR-215ENST00000546296 PDGFRBP09619 1106 aa18.01■□□□□ 0.47
LTBR-215ENST00000546296 FAM163BP0C2L3 166 aa18.01■□□□□ 0.47
LTBR-215ENST00000546296 WARSP23381 471 aaKnown RBP18.01■□□□□ 0.47
LTBR-215ENST00000546296 ACAT1P24752 427 aaKnown RBP18.01■□□□□ 0.47
LTBR-215ENST00000546296 MTIF2P46199 727 aaKnown RBP18.01■□□□□ 0.47
LTBR-215ENST00000546296 TYRO3Q06418 890 aa18.01■□□□□ 0.47
LTBR-215ENST00000546296 CETN1Q12798 172 aa18.01■□□□□ 0.47
LTBR-215ENST00000546296 UVSSAQ2YD98 709 aa18.01■□□□□ 0.47
LTBR-215ENST00000546296 CBWD6Q4V339 395 aa18.01■□□□□ 0.47
LTBR-215ENST00000546296 TJAP1Q5JTD0 557 aa18.01■□□□□ 0.47
LTBR-215ENST00000546296 CBWD3Q5JTY5 395 aa18.01■□□□□ 0.47
LTBR-215ENST00000546296 CBWD5Q5RIA9 395 aa18.01■□□□□ 0.47
LTBR-215ENST00000546296 SPOPLQ6IQ16 392 aa18.01■□□□□ 0.47
LTBR-215ENST00000546296 SCARA5Q6ZMJ2 495 aa18.01■□□□□ 0.47
LTBR-215ENST00000546296 LIMS2Q7Z4I7 341 aa18.01■□□□□ 0.47
LTBR-215ENST00000546296 OSTM1Q86WC4 334 aa18.01■□□□□ 0.47
LTBR-215ENST00000546296 TRIM59Q8IWR1 403 aa18.01■□□□□ 0.47
LTBR-215ENST00000546296 CNOT6LQ96LI5 555 aaKnown RBP18.01■□□□□ 0.47
LTBR-215ENST00000546296 RIPOR3Q96MK2 946 aa18.01■□□□□ 0.47
LTBR-215ENST00000546296 MRPL45Q9BRJ2 306 aaKnown RBP18.01■□□□□ 0.47
LTBR-215ENST00000546296 THAP9Q9H5L6 903 aa18.01■□□□□ 0.47
LTBR-215ENST00000546296 RAB20Q9NX57 234 aa18.01■□□□□ 0.47
LTBR-215ENST00000546296 ZDHHC7Q9NXF8 308 aa18.01■□□□□ 0.47
LTBR-215ENST00000546296 GABRDO14764 452 aa18■□□□□ 0.47
LTBR-215ENST00000546296 SEC24AO95486 1093 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms