RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 SLC12A4Q9UP95 1085 aa24.61■■□□□ 1.53
FOXA1-202ENST00000545425 EFR3BQ9Y2G0 817 aa24.61■■□□□ 1.53
FOXA1-202ENST00000545425 CNTNAP2Q9UHC6 1331 aa24.61■■□□□ 1.53
FOXA1-202ENST00000545425 SNX3O60493 162 aa24.61■■□□□ 1.53
FOXA1-202ENST00000545425 ACSL3O95573 720 aa24.61■■□□□ 1.53
FOXA1-202ENST00000545425 OAS1P00973 400 aaKnown RBP24.61■■□□□ 1.53
FOXA1-202ENST00000545425 KLRC2P26717 231 aa24.61■■□□□ 1.53
FOXA1-202ENST00000545425 SLCO1A2P46721 670 aa24.61■■□□□ 1.53
FOXA1-202ENST00000545425 NOL9Q5SY16 702 aaKnown RBP24.61■■□□□ 1.53
FOXA1-202ENST00000545425 IZUMO3Q5VZ72 239 aa24.61■■□□□ 1.53
FOXA1-202ENST00000545425 FAM160B1Q5W0V3 765 aa24.61■■□□□ 1.53
FOXA1-202ENST00000545425 TRPM8Q7Z2W7 1104 aa24.61■■□□□ 1.53
FOXA1-202ENST00000545425 FUKQ8N0W3 1084 aa24.61■■□□□ 1.53
FOXA1-202ENST00000545425 CKAP2Q8WWK9 683 aa24.61■■□□□ 1.53
FOXA1-202ENST00000545425 FAM167AQ96KS9 214 aa24.61■■□□□ 1.53
FOXA1-202ENST00000545425 CCDC113Q9H0I3 377 aa24.61■■□□□ 1.53
FOXA1-202ENST00000545425 USP15Q9Y4E8 981 aaPredicted RBP24.61■■□□□ 1.53
FOXA1-202ENST00000545425 TMEM120BA0PK00 339 aa24.6■■□□□ 1.53
FOXA1-202ENST00000545425 RDXP35241 583 aaKnown RBP24.6■■□□□ 1.53
FOXA1-202ENST00000545425 CHKAP35790 457 aa24.6■■□□□ 1.53
FOXA1-202ENST00000545425 NFX1Q12986 1120 aaKnown RBP24.6■■□□□ 1.53
FOXA1-202ENST00000545425 NCOA4Q13772 614 aa24.6■■□□□ 1.53
FOXA1-202ENST00000545425 PIGHQ14442 188 aaPredicted RBP24.6■■□□□ 1.53
FOXA1-202ENST00000545425 LONRF1Q17RB8 773 aa24.6■■□□□ 1.53
FOXA1-202ENST00000545425 NIPA2Q8N8Q9 360 aa24.6■■□□□ 1.53
FOXA1-202ENST00000545425 ASAP3Q8TDY4 903 aa24.6■■□□□ 1.53
FOXA1-202ENST00000545425 JPH2Q9BR39 696 aaPredicted RBP24.6■■□□□ 1.53
FOXA1-202ENST00000545425 DDX23Q9BUQ8 820 aaKnown RBP24.6■■□□□ 1.53
FOXA1-202ENST00000545425 ELP3Q9H9T3 547 aa24.6■■□□□ 1.53
FOXA1-202ENST00000545425 APOBEC3GQ9HC16 384 aaKnown RBP24.6■■□□□ 1.53
FOXA1-202ENST00000545425 TMEM191CA6NGB0 347 aa24.59■■□□□ 1.53
FOXA1-202ENST00000545425 LRRIQ4A6NIV6 560 aa24.59■■□□□ 1.53
FOXA1-202ENST00000545425 ADCY3O60266 1144 aa24.59■■□□□ 1.53
FOXA1-202ENST00000545425 TMEM191BP0C7N4 346 aa24.59■■□□□ 1.53
FOXA1-202ENST00000545425 CDH5P33151 784 aaPredicted RBP24.59■■□□□ 1.53
FOXA1-202ENST00000545425 VGLL4Q14135 290 aa24.59■■□□□ 1.53
FOXA1-202ENST00000545425 SNCBQ16143 134 aa24.59■■□□□ 1.53
FOXA1-202ENST00000545425 TMEM35BQ8NCS4 154 aa24.59■■□□□ 1.53
FOXA1-202ENST00000545425 ATG4AQ8WYN0 398 aa24.59■■□□□ 1.53
FOXA1-202ENST00000545425 WRNIP1Q96S55 665 aa24.59■■□□□ 1.53
FOXA1-202ENST00000545425 NKIRAS1Q9NYS0 192 aa24.59■■□□□ 1.53
FOXA1-202ENST00000545425 ASS1P00966 412 aaKnown RBP24.58■■□□□ 1.53
FOXA1-202ENST00000545425 ACOT2P49753 483 aa24.58■■□□□ 1.53
FOXA1-202ENST00000545425 DGKZQ13574 1117 aa24.58■■□□□ 1.53
FOXA1-202ENST00000545425 TARBP2Q15633 366 aaKnown RBP24.58■■□□□ 1.53
FOXA1-202ENST00000545425 CYB5D1Q6P9G0 228 aa24.58■■□□□ 1.53
FOXA1-202ENST00000545425 VSTM1Q6UX27 236 aa24.58■■□□□ 1.53
FOXA1-202ENST00000545425 ANKS1BQ7Z6G8 1248 aa24.58■■□□□ 1.53
FOXA1-202ENST00000545425 PARP9Q8IXQ6 854 aa24.58■■□□□ 1.53
FOXA1-202ENST00000545425 TRIM7Q9C029 511 aa24.58■■□□□ 1.53
FOXA1-202ENST00000545425 YY1AP1Q9H869 796 aa24.58■■□□□ 1.53
FOXA1-202ENST00000545425 STRIP2Q9ULQ0 834 aa24.58■■□□□ 1.53
FOXA1-202ENST00000545425 SMAPO00193 183 aa24.58■■□□□ 1.53
FOXA1-202ENST00000545425 ALDH1A1P00352 501 aa24.58■■□□□ 1.53
FOXA1-202ENST00000545425 TAS2R40P59535 323 aa24.58■■□□□ 1.53
FOXA1-202ENST00000545425 MORF4L2Q15014 288 aa24.58■■□□□ 1.53
FOXA1-202ENST00000545425 POLNQ7Z5Q5 900 aa24.58■■□□□ 1.53
FOXA1-202ENST00000545425 CCDC91Q7Z6B0 441 aa24.58■■□□□ 1.53
FOXA1-202ENST00000545425 UHMK1Q8TAS1 419 aaKnown RBP24.58■■□□□ 1.53
FOXA1-202ENST00000545425 TCP11Q8WWU5 503 aa24.58■■□□□ 1.53
FOXA1-202ENST00000545425 MAGEB18Q96M61 343 aa24.58■■□□□ 1.53
FOXA1-202ENST00000545425 ELAC2Q9BQ52 826 aaKnown RBP24.58■■□□□ 1.53
FOXA1-202ENST00000545425 HAUS2Q9NVX0 235 aa24.58■■□□□ 1.53
FOXA1-202ENST00000545425 PCDHGC3Q9UN70 934 aa24.58■■□□□ 1.53
FOXA1-202ENST00000545425 R3HDM2Q9Y2K5 976 aaKnown RBP24.58■■□□□ 1.53
FOXA1-202ENST00000545425 CEP83Q9Y592 693 aa24.58■■□□□ 1.53
FOXA1-202ENST00000545425 FAM170AA1A519 330 aa24.57■■□□□ 1.52
FOXA1-202ENST00000545425 DNALI1O14645 258 aaPredicted RBP24.57■■□□□ 1.52
FOXA1-202ENST00000545425 LIASO43766 372 aa24.57■■□□□ 1.52
FOXA1-202ENST00000545425 EIF4BP23588 611 aaKnown RBP24.57■■□□□ 1.52
FOXA1-202ENST00000545425 SLC8A1P32418 973 aa24.57■■□□□ 1.52
FOXA1-202ENST00000545425 NEDD9Q14511 834 aa24.57■■□□□ 1.52
FOXA1-202ENST00000545425 KYNUQ16719 465 aa24.57■■□□□ 1.52
FOXA1-202ENST00000545425 SH3D19Q5HYK7 790 aa24.57■■□□□ 1.52
FOXA1-202ENST00000545425 PCGF5Q86SE9 256 aa24.57■■□□□ 1.52
FOXA1-202ENST00000545425 ZNF606Q8WXB4 792 aa24.57■■□□□ 1.52
FOXA1-202ENST00000545425 OPTNQ96CV9 577 aa24.57■■□□□ 1.52
FOXA1-202ENST00000545425 MRPL4Q9BYD3 311 aaKnown RBP24.57■■□□□ 1.52
FOXA1-202ENST00000545425 A0A1B0GUA9 196 aa24.56■■□□□ 1.52
FOXA1-202ENST00000545425 TGFB3P10600 412 aa24.56■■□□□ 1.52
FOXA1-202ENST00000545425 BRAFP15056 766 aa24.56■■□□□ 1.52
FOXA1-202ENST00000545425 ATP4AP20648 1035 aa24.56■■□□□ 1.52
FOXA1-202ENST00000545425 RIPK1Q13546 671 aa24.56■■□□□ 1.52
FOXA1-202ENST00000545425 SGSM1Q2NKQ1 1148 aa24.56■■□□□ 1.52
FOXA1-202ENST00000545425 GSTA5Q7RTV2 222 aa24.56■■□□□ 1.52
FOXA1-202ENST00000545425 NKD2Q969F2 451 aaPredicted RBP24.56■■□□□ 1.52
FOXA1-202ENST00000545425 TMEM143Q96AN5 459 aa24.56■■□□□ 1.52
FOXA1-202ENST00000545425 SLITRK1Q96PX8 696 aa24.56■■□□□ 1.52
FOXA1-202ENST00000545425 HERPUD2Q9BSE4 406 aa24.56■■□□□ 1.52
FOXA1-202ENST00000545425 EURLQ9NYK6 297 aa24.56■■□□□ 1.52
FOXA1-202ENST00000545425 FETUBQ9UGM5 382 aa24.56■■□□□ 1.52
FOXA1-202ENST00000545425 SHOC2Q9UQ13 582 aa24.56■■□□□ 1.52
FOXA1-202ENST00000545425 ARL2BPQ9Y2Y0 163 aa24.56■■□□□ 1.52
FOXA1-202ENST00000545425 NUB1Q9Y5A7 615 aa24.56■■□□□ 1.52
FOXA1-202ENST00000545425 PTPRJQ12913 1337 aa24.56■■□□□ 1.52
FOXA1-202ENST00000545425 TOM1L1O75674 476 aa24.56■■□□□ 1.52
FOXA1-202ENST00000545425 MAGEA4P43358 317 aa24.56■■□□□ 1.52
FOXA1-202ENST00000545425 HMGCS2P54868 508 aa24.56■■□□□ 1.52
FOXA1-202ENST00000545425 IER5Q5VY09 327 aa24.56■■□□□ 1.52
FOXA1-202ENST00000545425 DNAJC24Q6P3W2 148 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms