RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 SLC46A2Q9BY10 475 aa10.26□□□□□ -0.77
CHD4-212ENST00000545083 TASP1Q9H6P5 420 aa10.26□□□□□ -0.77
CHD4-212ENST00000545083 IL21Q9HBE4 155 aa10.26□□□□□ -0.77
CHD4-212ENST00000545083 CCL26Q9Y258 94 aa10.26□□□□□ -0.77
CHD4-212ENST00000545083 HELZ2Q9BYK8 2649 aaKnown RBP10.26□□□□□ -0.77
CHD4-212ENST00000545083 NUP210Q8TEM1 1887 aaPredicted RBP10.25□□□□□ -0.77
CHD4-212ENST00000545083 MTMR11A4FU01 709 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 K7ERI5 159 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 CTDNEP1O95476 244 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 HARSP12081 509 aaKnown RBP10.25□□□□□ -0.77
CHD4-212ENST00000545083 ARSAP15289 507 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 PROZP22891 400 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 MARCKSP29966 332 aaPredicted RBP10.25□□□□□ -0.77
CHD4-212ENST00000545083 WEE1P30291 646 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 GBP1P32455 592 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 KRT2P35908 639 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 ALDH1A3P47895 512 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 GALK1P51570 392 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 CDR1P51861 262 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 IRX4P78413 519 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 GPR17Q13304 367 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 RUNX3Q13761 415 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 ECM1Q16610 540 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 SLC10A6Q3KNW5 377 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 UAP1L1Q3KQV9 507 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 SEZ6Q53EL9 994 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 SOWAHCQ53LP3 525 aaPredicted RBP10.25□□□□□ -0.77
CHD4-212ENST00000545083 PMS2CLQ68D20 193 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 APBB1IPQ7Z5R6 666 aaPredicted RBP10.25□□□□□ -0.77
CHD4-212ENST00000545083 HOMEZQ8IX15 550 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 RPLP0P6Q8NHW5 317 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 ZBTB45Q96K62 511 aaPredicted RBP10.25□□□□□ -0.77
CHD4-212ENST00000545083 IFT74Q96LB3 600 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 ACAP3Q96P50 834 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 LPIN3Q9BQK8 851 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 EBF3Q9H4W6 596 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 TPCN1Q9ULQ1 816 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 MSRB2Q9Y3D2 182 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 NEUROG3Q9Y4Z2 214 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 ASB3Q9Y575 518 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 STK36Q9NRP7 1315 aa10.25□□□□□ -0.77
CHD4-212ENST00000545083 CELSR3Q9NYQ7 3312 aa10.24□□□□□ -0.77
CHD4-212ENST00000545083 PCNX2A6NKB5 2137 aa10.24□□□□□ -0.77
CHD4-212ENST00000545083 GON4LQ3T8J9 2241 aa10.24□□□□□ -0.77
CHD4-212ENST00000545083 ANTXRLA6NF34 631 aa10.24□□□□□ -0.77
CHD4-212ENST00000545083 KHNYNO15037 678 aaKnown RBP10.24□□□□□ -0.77
CHD4-212ENST00000545083 ZIC2O95409 532 aaPredicted RBP10.24□□□□□ -0.77
CHD4-212ENST00000545083 LARGE1O95461 756 aa10.24□□□□□ -0.77
CHD4-212ENST00000545083 APBB3O95704 486 aa10.24□□□□□ -0.77
CHD4-212ENST00000545083 CAPNS1P04632 268 aa10.24□□□□□ -0.77
CHD4-212ENST00000545083 MCF2P10911 925 aa10.24□□□□□ -0.77
CHD4-212ENST00000545083 FDPSP14324 419 aaKnown RBP10.24□□□□□ -0.77
CHD4-212ENST00000545083 XBP1P17861 261 aa10.24□□□□□ -0.77
CHD4-212ENST00000545083 ATF6P18850 670 aa10.24□□□□□ -0.77
CHD4-212ENST00000545083 BCKDHBP21953 392 aa10.24□□□□□ -0.77
CHD4-212ENST00000545083 AARSP49588 968 aaKnown RBP eCLIP10.24□□□□□ -0.77
CHD4-212ENST00000545083 SPAG1Q07617 926 aa10.24□□□□□ -0.77
CHD4-212ENST00000545083 DMC1Q14565 340 aa10.24□□□□□ -0.77
CHD4-212ENST00000545083 KARSQ15046 597 aaKnown RBP10.24□□□□□ -0.77
CHD4-212ENST00000545083 ARHGAP15Q53QZ3 475 aa10.24□□□□□ -0.77
CHD4-212ENST00000545083 SYT13Q7L8C5 426 aa10.24□□□□□ -0.77
CHD4-212ENST00000545083 DAW1Q8N136 415 aa10.24□□□□□ -0.77
CHD4-212ENST00000545083 USP13Q92995 863 aaPredicted RBP10.24□□□□□ -0.77
CHD4-212ENST00000545083 YTHDC1Q96MU7 727 aaKnown RBP10.24□□□□□ -0.77
CHD4-212ENST00000545083 TPSD1Q9BZJ3 242 aa10.24□□□□□ -0.77
CHD4-212ENST00000545083 THG1LQ9NWX6 298 aaKnown RBP10.24□□□□□ -0.77
CHD4-212ENST00000545083 EBF1Q9UH73 591 aa10.24□□□□□ -0.77
CHD4-212ENST00000545083 ASH1LQ9NR48 2969 aaKnown RBP10.24□□□□□ -0.77
CHD4-212ENST00000545083 NUP205Q92621 2012 aa10.24□□□□□ -0.77
CHD4-212ENST00000545083 SPAARA0A1B0GVQ0 90 aa10.23□□□□□ -0.77
CHD4-212ENST00000545083 OR6C75A6NL08 312 aa10.23□□□□□ -0.77
CHD4-212ENST00000545083 BTBD18B2RXH4 712 aa10.23□□□□□ -0.77
CHD4-212ENST00000545083 PPEF2O14830 753 aa10.23□□□□□ -0.77
CHD4-212ENST00000545083 CDKL5O76039 1030 aa10.23□□□□□ -0.77
CHD4-212ENST00000545083 RPA1P27694 616 aa10.23□□□□□ -0.77
CHD4-212ENST00000545083 LRPAP1P30533 357 aa10.23□□□□□ -0.77
CHD4-212ENST00000545083 NPTX2P47972 431 aa10.23□□□□□ -0.77
CHD4-212ENST00000545083 GUCY2FP51841 1108 aa10.23□□□□□ -0.77
CHD4-212ENST00000545083 DGKEP52429 567 aa10.23□□□□□ -0.77
CHD4-212ENST00000545083 PEX3P56589 373 aa10.23□□□□□ -0.77
CHD4-212ENST00000545083 PTPAQ15257 358 aa10.23□□□□□ -0.77
CHD4-212ENST00000545083 C19orf48Q6RUI8 117 aa10.23□□□□□ -0.77
CHD4-212ENST00000545083 CYP2U1Q7Z449 544 aa10.23□□□□□ -0.77
CHD4-212ENST00000545083 TMEM150AQ86TG1 271 aa10.23□□□□□ -0.77
CHD4-212ENST00000545083 CMTM8Q8IZV2 173 aa10.23□□□□□ -0.77
CHD4-212ENST00000545083 OR10T2Q8NGX3 314 aa10.23□□□□□ -0.77
CHD4-212ENST00000545083 KIFAP3Q92845 792 aa10.23□□□□□ -0.77
CHD4-212ENST00000545083 TCHPQ9BT92 498 aa10.23□□□□□ -0.77
CHD4-212ENST00000545083 MRPL4Q9BYD3 311 aaKnown RBP10.23□□□□□ -0.77
CHD4-212ENST00000545083 ORC3Q9UBD5 711 aaPredicted RBP10.23□□□□□ -0.77
CHD4-212ENST00000545083 TBX20Q9UMR3 447 aa10.23□□□□□ -0.77
CHD4-212ENST00000545083 CYP46A1Q9Y6A2 500 aa10.23□□□□□ -0.77
CHD4-212ENST00000545083 PHLPP2Q6ZVD8 1323 aa10.23□□□□□ -0.77
CHD4-212ENST00000545083 APC2O95996 2303 aa10.22□□□□□ -0.77
CHD4-212ENST00000545083 CCDC169A6NNP5 214 aa10.22□□□□□ -0.77
CHD4-212ENST00000545083 FGF19O95750 216 aa10.22□□□□□ -0.77
CHD4-212ENST00000545083 DRD1P21728 446 aa10.22□□□□□ -0.77
CHD4-212ENST00000545083 CDC25CP30307 473 aa10.22□□□□□ -0.77
CHD4-212ENST00000545083 NMT1P30419 496 aaKnown RBP10.22□□□□□ -0.77
CHD4-212ENST00000545083 GJA4P35212 333 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 179.9 ms