RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 RNPEPQ9H4A4 650 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 MINDY3Q9H8M7 445 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 ERAP1Q9NZ08 941 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 TNFSF13BQ9Y275 285 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 ASB14A6NK59 587 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 TMOD1P28289 359 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 SNAPC2Q13487 334 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 SMYD5Q6GMV2 418 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 CYP4F22Q6NT55 531 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 DNAJC24Q6P3W2 148 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 CROCCP2Q86T23 111 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 NLRP14Q86W24 1093 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 SHCBP1Q8NEM2 672 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 MYCBPAPQ8TBZ2 947 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 TMEM109Q9BVC6 243 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 PCDHGC3Q9UN70 934 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 PDHXO00330 501 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 C22orf31O95567 290 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 CDH5P33151 784 aaPredicted RBP14.74□□□□□ -0.05
MSH2-206ENST00000543555 ADCY2Q08462 1091 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 ZNF252P-AS1Q0IIN9 211 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 ANKS1BQ7Z6G8 1248 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 CCDC25Q86WR0 208 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 TFAP2BQ92481 460 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 NFKBIZQ9BYH8 718 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 EFCC1Q9HA90 598 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 AAASQ9NRG9 546 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 NEU2Q9Y3R4 380 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 MKI67P46013 3256 aaKnown RBP14.74□□□□□ -0.05
MSH2-206ENST00000543555 PAEPP09466 180 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 EIF4BP23588 611 aaKnown RBP14.74□□□□□ -0.05
MSH2-206ENST00000543555 CORO7P57737 925 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 ARHGAP1Q07960 439 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 TRIP13Q15645 432 aaPredicted RBP14.74□□□□□ -0.05
MSH2-206ENST00000543555 SPRYD7Q5W111 196 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 TRMT10CQ7L0Y3 403 aaKnown RBP14.74□□□□□ -0.05
MSH2-206ENST00000543555 ARMCX2Q7L311 632 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 WDTC1Q8N5D0 677 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 ZNF473Q8WTR7 871 aaKnown RBP14.74□□□□□ -0.05
MSH2-206ENST00000543555 MCEEQ96PE7 176 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 CCT8L2Q96SF2 557 aa14.74□□□□□ -0.05
MSH2-206ENST00000543555 RPF1Q9H9Y2 349 aaKnown RBP14.74□□□□□ -0.05
MSH2-206ENST00000543555 PPANQ9NQ55 473 aaKnown RBP14.74□□□□□ -0.05
MSH2-206ENST00000543555 MCM3APO60318 1980 aa14.73□□□□□ -0.05
MSH2-206ENST00000543555 TLDC2A0PJX2 215 aa14.73□□□□□ -0.05
MSH2-206ENST00000543555 E7EVH7 732 aa14.73□□□□□ -0.05
MSH2-206ENST00000543555 TRIM66O15016 1216 aa14.73□□□□□ -0.05
MSH2-206ENST00000543555 IL18RAPO95256 599 aa14.73□□□□□ -0.05
MSH2-206ENST00000543555 FAM107AO95990 144 aa14.73□□□□□ -0.05
MSH2-206ENST00000543555 IQCF3P0C7M6 154 aa14.73□□□□□ -0.05
MSH2-206ENST00000543555 CXCL8P10145 99 aa14.73□□□□□ -0.05
MSH2-206ENST00000543555 ATF2P15336 505 aa14.73□□□□□ -0.05
MSH2-206ENST00000543555 YWHAEP62258 255 aaKnown RBP14.73□□□□□ -0.05
MSH2-206ENST00000543555 PPARDQ03181 441 aa14.73□□□□□ -0.05
MSH2-206ENST00000543555 C6orf118Q5T5N4 469 aa14.73□□□□□ -0.05
MSH2-206ENST00000543555 B4GALNT4Q76KP1 1039 aa14.73□□□□□ -0.05
MSH2-206ENST00000543555 TMEM192Q8IY95 271 aa14.73□□□□□ -0.05
MSH2-206ENST00000543555 UHMK1Q8TAS1 419 aaKnown RBP14.73□□□□□ -0.05
MSH2-206ENST00000543555 CNOT10Q9H9A5 744 aaKnown RBP14.73□□□□□ -0.05
MSH2-206ENST00000543555 PRMT7Q9NVM4 692 aaPredicted RBP14.73□□□□□ -0.05
MSH2-206ENST00000543555 ANKRD65E5RJM6 399 aa14.73□□□□□ -0.05
MSH2-206ENST00000543555 TCF4P15884 667 aa14.73□□□□□ -0.05
MSH2-206ENST00000543555 CETN2P41208 172 aa14.73□□□□□ -0.05
MSH2-206ENST00000543555 IGBP1P78318 339 aa14.73□□□□□ -0.05
MSH2-206ENST00000543555 NFX1Q12986 1120 aaKnown RBP14.73□□□□□ -0.05
MSH2-206ENST00000543555 ZNF484Q5JVG2 852 aa14.73□□□□□ -0.05
MSH2-206ENST00000543555 PPP1R15BQ5SWA1 713 aa14.73□□□□□ -0.05
MSH2-206ENST00000543555 RBM41Q96IZ5 413 aaKnown RBP14.73□□□□□ -0.05
MSH2-206ENST00000543555 FAM107BQ9H098 131 aa14.73□□□□□ -0.05
MSH2-206ENST00000543555 CDC42EP4Q9H3Q1 356 aaKnown RBP14.73□□□□□ -0.05
MSH2-206ENST00000543555 IFT122Q9HBG6 1241 aa14.73□□□□□ -0.05
MSH2-206ENST00000543555 KLHL11Q9NVR0 708 aa14.73□□□□□ -0.05
MSH2-206ENST00000543555 NXF1Q9UBU9 619 aaKnown RBP14.73□□□□□ -0.05
MSH2-206ENST00000543555 POLIQ9UNA4 740 aa14.73□□□□□ -0.05
MSH2-206ENST00000543555 CEP83Q9Y592 693 aa14.73□□□□□ -0.05
MSH2-206ENST00000543555 SMIM23A6NLE4 172 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 RGS16O15492 202 aaPredicted RBP14.72□□□□□ -0.05
MSH2-206ENST00000543555 TRAPPC3O43617 180 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 INSRRP14616 1297 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 PHKA2P46019 1235 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 ITGA8P53708 1063 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 OGDHQ02218 1023 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 CAV1Q03135 178 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 TAP1Q03518 808 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 ATP13A4Q4VNC1 1196 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 LRRC38Q5VT99 294 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 DCUN1D2Q6PH85 259 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 ERICH1Q86X53 443 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 C10orf67Q8IYJ2 551 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 RCOR2Q8IZ40 523 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 SCLT1Q96NL6 688 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 FAM118BQ9BPY3 351 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 FAM169AQ9Y6X4 670 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 GPR25O00155 361 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 KRT19P08727 400 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 CHKAP35790 457 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 ADCY8P40145 1251 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 LACTBP83111 547 aaPredicted RBP14.72□□□□□ -0.05
MSH2-206ENST00000543555 POU5F1BQ06416 359 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 LAMC2Q13753 1193 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms