RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 CALR3Q96L12 384 aaKnown RBP18.33■□□□□ 0.52
TMEM50B-210ENST00000542230 TRIM51Q9BSJ1 452 aa18.33■□□□□ 0.52
TMEM50B-210ENST00000542230 GOLGA2P5Q9HBQ8 144 aa18.33■□□□□ 0.52
TMEM50B-210ENST00000542230 RNF186Q9NXI6 227 aa18.33■□□□□ 0.52
TMEM50B-210ENST00000542230 MEIS3P2A8K0S8 358 aa18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 POLR3GO15318 223 aaPredicted RBP18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 TLR3O15455 904 aaKnown RBP18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 CTSHP09668 335 aa18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 MYBL1P10243 752 aa18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 HOXC8P31273 242 aa18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 GYS2P54840 703 aa18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 C1QBPQ07021 282 aaKnown RBP18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 ZNF252P-AS1Q0IIN9 211 aa18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 DCAF4L1Q3SXM0 396 aa18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 PTPN20Q4JDL3 420 aa18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 ATP13A4Q4VNC1 1196 aa18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 ANKS1BQ7Z6G8 1248 aa18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 PRELID2Q8N945 189 aa18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 C18orf8Q96DM3 657 aa18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 TRIM6Q9C030 488 aaPredicted RBP18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 PRDM10Q9NQV6 1147 aa18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 CYP3A5P20815 502 aa18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 MCM3P25205 808 aa18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 GJC1P36383 396 aa18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 LIN9Q5TKA1 542 aa18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 ALKAL1Q6UXT8 129 aa18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 TSEN2Q8NCE0 465 aaKnown RBP18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 RIN2Q8WYP3 895 aaPredicted RBP18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 TRIM31Q9BZY9 425 aa18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 NEUROG2Q9H2A3 272 aa18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 KLHL11Q9NVR0 708 aa18.32■□□□□ 0.52
TMEM50B-210ENST00000542230 TCRBV5S1A1TA0A578 114 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 PIK3R2O00459 728 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 ECHS1P30084 290 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 NDST1P52848 882 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 GJA9P57773 515 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 RBP5P82980 135 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 ZBTB6Q15916 424 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 TTC27Q6P3X3 843 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 SESTD1Q86VW0 696 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 IFT20Q8IY31 132 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 UBA3Q8TBC4 463 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 MCEEQ96PE7 176 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 MRPL45Q9BRJ2 306 aaKnown RBP18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 CACNG4Q9UBN1 327 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 ITGA11Q9UKX5 1188 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 HPCAL4Q9UM19 191 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 CCDC66A2RUB6 948 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 PROSCO94903 275 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 CTNNA2P26232 953 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 OAS2P29728 719 aaKnown RBP18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 PTPN11Q06124 597 aaPredicted RBP18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 FAM47CQ5HY64 1035 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 FAM228AQ86W67 206 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 TMEM35BQ8NCS4 154 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 TRIM11Q96F44 468 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 TMEM176AQ96HP8 235 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 HEXIM2Q96MH2 286 aaKnown RBP18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 CPXM1Q96SM3 734 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 VRTNQ9H8Y1 702 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 PCDHGC3Q9UN70 934 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 SNX9Q9Y5X1 595 aa18.31■□□□□ 0.52
TMEM50B-210ENST00000542230 F8VP50 259 aa18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 GOLGA8SH3BPF8 625 aa18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 RWDD2BP57060 319 aa18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 SOX4Q06945 474 aaPredicted RBP18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 SIX1Q15475 284 aaPredicted RBP18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 KYAT1Q16773 422 aa18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 MFSD14CQ5VZR4 134 aa18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 SMG8Q8ND04 991 aaKnown RBP18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 FEZF2Q8TBJ5 459 aa18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 DDX27Q96GQ7 796 aaKnown RBP18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 VCPIP1Q96JH7 1222 aa18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 KATNAL1Q9BW62 490 aa18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 PARP2Q9UGN5 583 aa18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 CCDC188H7C350 402 aa18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 DAPK3O43293 454 aa18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 RARAP10276 462 aa18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 ATICP31939 592 aa18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 SSR1P43307 286 aaKnown RBP18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 AFF1P51825 1210 aaKnown RBP18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 CRYBB1P53674 252 aaPredicted RBP18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 MAP9Q49MG5 647 aa18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 TXNRD3NBQ6F5E7 133 aa18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 ERICH1Q86X53 443 aa18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 SLC13A5Q86YT5 568 aaPredicted RBP18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 SMC1BQ8NDV3 1235 aa18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 ACSF2Q96CM8 615 aaPredicted RBP18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 DPH5Q9H2P9 285 aa18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 PARVAQ9NVD7 372 aa18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 SCN10AQ9Y5Y9 1956 aa18.3■□□□□ 0.52
TMEM50B-210ENST00000542230 A0A0U1RQG5 324 aaPredicted RBP18.29■□□□□ 0.52
TMEM50B-210ENST00000542230 SMIM28A0A1B0GU29 152 aa18.29■□□□□ 0.52
TMEM50B-210ENST00000542230 TMEM191CA6NGB0 347 aa18.29■□□□□ 0.52
TMEM50B-210ENST00000542230 SPTLC1O15269 473 aa18.29■□□□□ 0.52
TMEM50B-210ENST00000542230 MICAL2O94851 1124 aa18.29■□□□□ 0.52
TMEM50B-210ENST00000542230 LSM8O95777 96 aaKnown RBP18.29■□□□□ 0.52
TMEM50B-210ENST00000542230 CDH5P33151 784 aaPredicted RBP18.29■□□□□ 0.52
TMEM50B-210ENST00000542230 KCNJ1P48048 391 aa18.29■□□□□ 0.52
TMEM50B-210ENST00000542230 FAM193AP78312 1265 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms