RNA–Protein interactions for RNA: ENST00000541329.1

NPIPB4-213, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 432 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-213ENST00000541329 SND1Q7KZF4 910 aaKnown RBP eCLIP8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 FAM228AQ86W67 206 aa8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 PALB2Q86YC2 1186 aa8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 CREG2Q8IUH2 290 aa8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 C1orf127Q8N9H9 656 aa8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 RBBP8NLQ8NC74 664 aaPredicted RBP8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 SLAIN1Q8ND83 568 aa8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 EPS8L1Q8TE68 723 aa8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 PXYLP1Q8TE99 480 aa8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 RIN2Q8WYP3 895 aaPredicted RBP8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 ZBTB9Q96C00 473 aa8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 FAM81BQ96LP2 452 aa8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 PCDHB18PQ96TA0 734 aa8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 SYT11Q9BT88 431 aa8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 EPN3Q9H201 632 aa8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 NXF3Q9H4D5 531 aaKnown RBP8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 PLEKHA4Q9H4M7 779 aa8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 DPP3Q9NY33 737 aa8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 PARP2Q9UGN5 583 aa8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 NOCTQ9UK39 431 aaKnown RBP8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 AGAP1Q9UPQ3 857 aa8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 NOD1Q9Y239 953 aa8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 HYOU1Q9Y4L1 999 aa8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 CAPN7Q9Y6W3 813 aa8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 VCANP13611 3396 aa8.1□□□□□ -1.11
NPIPB4-213ENST00000541329 ANKRD65E5RJM6 399 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 PDE2AO00408 941 aaPredicted RBP8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 NDUFAB1O14561 156 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 THAP12O43422 761 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 PALMO75781 387 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 RECQL4O94761 1208 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 CHRNA1P02708 482 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 WEE2P0C1S8 567 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 ACO1P21399 889 aaKnown RBP8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 TBXAS1P24557 533 aaPredicted RBP8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 CST5P28325 142 aaPredicted RBP8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 RDXP35241 583 aaKnown RBP8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 PAFAH1B1P43034 410 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 DNA2P51530 1060 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 CDH8P55286 799 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 FMO1Q01740 532 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 CDR2Q01850 454 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 ACTN3Q08043 901 aaPredicted RBP8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 NFX1Q12986 1120 aaKnown RBP8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 PTPROQ16827 1216 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 PREPLQ4J6C6 727 aaPredicted RBP8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 ZNF394Q53GI3 561 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 GLRA4Q5JXX5 417 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 UBXN11Q5T124 520 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 TWF2Q6IBS0 349 aaKnown RBP8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 SERINC5Q86VE9 423 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 SESTD1Q86VW0 696 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 PASD1Q8IV76 773 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 IFT20Q8IY31 132 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 ARFGAP2Q8N6H7 521 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 GPATCH11Q8N954 259 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 P3H4Q92791 437 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 C18orf25Q96B23 403 aaPredicted RBP8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 ARHGEF26Q96DR7 871 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 SNX27Q96L92 541 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 NOX5Q96PH1 765 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 ALS2CR12Q96Q35 445 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 OSBPL7Q9BZF2 842 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 NIF3L1Q9GZT8 377 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 ASB7Q9H672 318 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 TRMT13Q9NUP7 481 aaKnown RBP8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 STIM2Q9P246 746 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 TUBGCP4Q9UGJ1 667 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 SIX4Q9UIU6 781 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 NENFQ9UMX5 172 aa8.09□□□□□ -1.11
NPIPB4-213ENST00000541329 TDRD15B5MCY1 1934 aaKnown RBP8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 GRID2IPA4D2P6 1211 aa8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 HMGB1P1B2RPK0 211 aaPredicted RBP8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 H0YHG0 523 aa8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 ATMINO43313 823 aaPredicted RBP8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 SRGAP2O75044 1071 aa8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 RTN2O75298 545 aa8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 FTCDO95954 541 aa8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 FTLP02792 175 aaPredicted RBP8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 CFHP08603 1231 aa8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 GHRP10912 638 aa8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 GNA15P30679 374 aa8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 CD52P31358 61 aa8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 PRMT2P55345 433 aa8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 C2orf54Q08AI8 447 aa8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 MGAT3Q09327 533 aa8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 PAK2Q13177 524 aa8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 ORC1Q13415 861 aa8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 PCBP1Q15365 356 aaKnown RBP eCLIP8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 WDR72Q3MJ13 1102 aa8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 TTMPQ5BVD1 217 aa8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 ZNF667Q5HYK9 610 aa8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 WLSQ5T9L3 541 aa8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 FBXW10Q5XX13 1052 aa8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 LHX8Q68G74 356 aa8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 LRIG3Q6UXM1 1119 aa8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 PHLDB2Q86SQ0 1253 aa8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 IQCKQ8N0W5 287 aa8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 RNF10Q8N5U6 811 aaKnown RBP8.08□□□□□ -1.12
NPIPB4-213ENST00000541329 SPATA4Q8NEY3 305 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms