RNA–Protein interactions for RNA: ENST00000541272.1

UBC-209, Transcript of ubiquitin C, humanhuman

TSL 5

Gene UBC, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-209ENST00000541272 NOVA1P51513 510 aaKnown RBP12.76□□□□□ -0.37
UBC-209ENST00000541272 SMTNP53814 917 aa12.76□□□□□ -0.37
UBC-209ENST00000541272 PEX3P56589 373 aa12.76□□□□□ -0.37
UBC-209ENST00000541272 COL9A2Q14055 689 aaPredicted RBP12.76□□□□□ -0.37
UBC-209ENST00000541272 NOLC1Q14978 699 aaKnown RBP eCLIP12.76□□□□□ -0.374e-6■■□□□ 13.6
UBC-209ENST00000541272 OVOS1Q6IE37 1185 aa12.76□□□□□ -0.37
UBC-209ENST00000541272 CMTM8Q8IZV2 173 aa12.76□□□□□ -0.37
UBC-209ENST00000541272 CEP120Q8N960 986 aa12.76□□□□□ -0.37
UBC-209ENST00000541272 SPPL2BQ8TCT7 592 aa12.76□□□□□ -0.37
UBC-209ENST00000541272 LRRC3BQ96PB8 259 aa12.76□□□□□ -0.37
UBC-209ENST00000541272 EDEM2Q9BV94 578 aa12.76□□□□□ -0.37
UBC-209ENST00000541272 TMEM60Q9H2L4 133 aa12.76□□□□□ -0.37
UBC-209ENST00000541272 GJB4Q9NTQ9 266 aa12.76□□□□□ -0.37
UBC-209ENST00000541272 EVLQ9UI08 416 aaPredicted RBP12.76□□□□□ -0.37
UBC-209ENST00000541272 TBX20Q9UMR3 447 aa12.76□□□□□ -0.37
UBC-209ENST00000541272 NEUROG3Q9Y4Z2 214 aa12.76□□□□□ -0.37
UBC-209ENST00000541272 MTMR11A4FU01 709 aa12.75□□□□□ -0.37
UBC-209ENST00000541272 CNOT1A5YKK6 2376 aaKnown RBP12.75□□□□□ -0.37
UBC-209ENST00000541272 FAM205CA6NFA0 338 aa12.75□□□□□ -0.37
UBC-209ENST00000541272 CCDC169A6NNP5 214 aa12.75□□□□□ -0.37
UBC-209ENST00000541272 LAD1O00515 517 aa12.75□□□□□ -0.37
UBC-209ENST00000541272 GUCY2CP25092 1073 aa12.75□□□□□ -0.37
UBC-209ENST00000541272 RDXP35241 583 aaKnown RBP12.75□□□□□ -0.37
UBC-209ENST00000541272 HOXD12P35452 270 aa12.75□□□□□ -0.37
UBC-209ENST00000541272 LMAN2Q12907 356 aa12.75□□□□□ -0.37
UBC-209ENST00000541272 HNRNPDQ14103 355 aaKnown RBP12.75□□□□□ -0.37
UBC-209ENST00000541272 TRIP11Q15643 1979 aa12.75□□□□□ -0.37
UBC-209ENST00000541272 FSTL4Q6MZW2 842 aa12.75□□□□□ -0.37
UBC-209ENST00000541272 GATA6Q92908 595 aa12.75□□□□□ -0.37
UBC-209ENST00000541272 KIFC3Q9BVG8 833 aa12.75□□□□□ -0.37
UBC-209ENST00000541272 TARS2Q9BW92 718 aaKnown RBP12.75□□□□□ -0.37
UBC-209ENST00000541272 FOXP1Q9H334 677 aaPredicted RBP12.75□□□□□ -0.37
UBC-209ENST00000541272 TMEM9BQ9NQ34 198 aa12.75□□□□□ -0.37
UBC-209ENST00000541272 GKN1Q9NS71 199 aa12.75□□□□□ -0.37
UBC-209ENST00000541272 C2orf42Q9NWW7 574 aa12.75□□□□□ -0.37
UBC-209ENST00000541272 USP20Q9Y2K6 914 aa12.75□□□□□ -0.37
UBC-209ENST00000541272 DERAQ9Y315 318 aa12.75□□□□□ -0.37
UBC-209ENST00000541272 SPAG17Q6Q759 2223 aa12.74□□□□□ -0.37
UBC-209ENST00000541272 CITO14578 2027 aa12.74□□□□□ -0.37
UBC-209ENST00000541272 A0A087WWV3 80 aa12.74□□□□□ -0.37
UBC-209ENST00000541272 EIF5BO60841 1220 aaKnown RBP12.74□□□□□ -0.37
UBC-209ENST00000541272 ODC1P11926 461 aa12.74□□□□□ -0.37
UBC-209ENST00000541272 TCF3P15923 654 aa12.74□□□□□ -0.37
UBC-209ENST00000541272 PFKLP17858 780 aa12.74□□□□□ -0.37
UBC-209ENST00000541272 MCM7P33993 719 aa12.74□□□□□ -0.37
UBC-209ENST00000541272 AVPR1AP37288 418 aa12.74□□□□□ -0.37
UBC-209ENST00000541272 CCT6AP40227 531 aaKnown RBP12.74□□□□□ -0.37
UBC-209ENST00000541272 LILRA4P59901 499 aa12.74□□□□□ -0.37
UBC-209ENST00000541272 OSTNP61366 133 aa12.74□□□□□ -0.37
UBC-209ENST00000541272 ZNF252P-AS1Q0IIN9 211 aa12.74□□□□□ -0.37
UBC-209ENST00000541272 HSF5Q4G112 596 aaPredicted RBP12.74□□□□□ -0.37
UBC-209ENST00000541272 USP39Q53GS9 565 aaKnown RBP12.74□□□□□ -0.37
UBC-209ENST00000541272 CC2D1AQ6P1N0 951 aaPredicted RBP12.74□□□□□ -0.37
UBC-209ENST00000541272 LRSAM1Q6UWE0 723 aa12.74□□□□□ -0.37
UBC-209ENST00000541272 DSTYKQ6XUX3 929 aa12.74□□□□□ -0.37
UBC-209ENST00000541272 TAS1R3Q7RTX0 852 aa12.74□□□□□ -0.37
UBC-209ENST00000541272 IGSF22Q8N9C0 903 aa12.74□□□□□ -0.37
UBC-209ENST00000541272 GTF3C6Q969F1 213 aa12.74□□□□□ -0.37
UBC-209ENST00000541272 C18orf25Q96B23 403 aaPredicted RBP12.74□□□□□ -0.37
UBC-209ENST00000541272 CCSER1Q9C0I3 900 aa12.74□□□□□ -0.37
UBC-209ENST00000541272 IL21Q9HBE4 155 aa12.74□□□□□ -0.37
UBC-209ENST00000541272 TDP1Q9NUW8 608 aa12.74□□□□□ -0.37
UBC-209ENST00000541272 UXTQ9UBK9 157 aaPredicted RBP12.74□□□□□ -0.37
UBC-209ENST00000541272 LRWD1Q9UFC0 647 aa12.74□□□□□ -0.37
UBC-209ENST00000541272 KIF26AQ9ULI4 1882 aaPredicted RBP12.74□□□□□ -0.37
UBC-209ENST00000541272 BAHCC1Q9P281 2608 aa12.73□□□□□ -0.37
UBC-209ENST00000541272 LNP1A1A4G5 178 aa12.73□□□□□ -0.37
UBC-209ENST00000541272 C4orf47A7E2U8 309 aa12.73□□□□□ -0.37
UBC-209ENST00000541272 C1QTNF9BB2RNN3 333 aa12.73□□□□□ -0.37
UBC-209ENST00000541272 C1QTNF9P0C862 333 aa12.73□□□□□ -0.37
UBC-209ENST00000541272 KCNA4P22459 653 aa12.73□□□□□ -0.37
UBC-209ENST00000541272 PPP2R3AQ06190 1150 aa12.73□□□□□ -0.37
UBC-209ENST00000541272 BFSP1Q12934 665 aa12.73□□□□□ -0.37
UBC-209ENST00000541272 NR1H3Q13133 447 aa12.73□□□□□ -0.37
UBC-209ENST00000541272 SPATA1Q5VX52 437 aa12.73□□□□□ -0.37
UBC-209ENST00000541272 PMS2CLQ68D20 193 aa12.73□□□□□ -0.37
UBC-209ENST00000541272 C1orf186Q6ZWK4 172 aa12.73□□□□□ -0.37
UBC-209ENST00000541272 DAW1Q8N136 415 aa12.73□□□□□ -0.37
UBC-209ENST00000541272 CPA6Q8N4T0 437 aa12.73□□□□□ -0.37
UBC-209ENST00000541272 CEP295NLQ96MC4 621 aa12.73□□□□□ -0.37
UBC-209ENST00000541272 P2RY13Q9BPV8 354 aa12.73□□□□□ -0.37
UBC-209ENST00000541272 SLC46A2Q9BY10 475 aa12.73□□□□□ -0.37
UBC-209ENST00000541272 ZCWPW1Q9H0M4 648 aa12.73□□□□□ -0.37
UBC-209ENST00000541272 CRISPLD1Q9H336 500 aa12.73□□□□□ -0.37
UBC-209ENST00000541272 SLC32A1Q9H598 525 aa12.73□□□□□ -0.37
UBC-209ENST00000541272 KIAA1024Q9UPX6 916 aa12.73□□□□□ -0.37
UBC-209ENST00000541272 MSRB2Q9Y3D2 182 aa12.73□□□□□ -0.37
UBC-209ENST00000541272 SRRM3A6NNA2 597 aaPredicted RBP12.72□□□□□ -0.37
UBC-209ENST00000541272 MEFVO15553 781 aaPredicted RBP12.72□□□□□ -0.37
UBC-209ENST00000541272 RNF40O75150 1001 aa12.72□□□□□ -0.37
UBC-209ENST00000541272 PLS3P13797 630 aa12.72□□□□□ -0.37
UBC-209ENST00000541272 CDC25AP30304 524 aa12.72□□□□□ -0.37
UBC-209ENST00000541272 PRPHP41219 470 aa12.72□□□□□ -0.37
UBC-209ENST00000541272 PDE6CP51160 858 aa12.72□□□□□ -0.37
UBC-209ENST00000541272 CREB5Q02930 508 aa12.72□□□□□ -0.37
UBC-209ENST00000541272 TNK2Q07912 1038 aa12.72□□□□□ -0.37
UBC-209ENST00000541272 BYSLQ13895 437 aaKnown RBP12.72□□□□□ -0.37
UBC-209ENST00000541272 TAF12Q16514 161 aa12.72□□□□□ -0.37
UBC-209ENST00000541272 STXBP5Q5T5C0 1151 aa12.72□□□□□ -0.37
UBC-209ENST00000541272 SH3PXD2AQ5TCZ1 1133 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms