RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 PMS1P54277 932 aaKnown RBP18.16■□□□□ 0.5
CD9-209ENST00000540891 SOWAHAQ2M3V2 549 aa18.16■□□□□ 0.5
CD9-209ENST00000540891 EDRF1Q3B7T1 1238 aa18.16■□□□□ 0.5
CD9-209ENST00000540891 TDRD10Q5VZ19 366 aaKnown RBP18.16■□□□□ 0.5
CD9-209ENST00000540891 ISM2Q6H9L7 571 aa18.16■□□□□ 0.5
CD9-209ENST00000540891 CENPPQ6IPU0 288 aa18.16■□□□□ 0.5
CD9-209ENST00000540891 OTOP3Q7RTS5 596 aa18.16■□□□□ 0.5
CD9-209ENST00000540891 LRRTM3Q86VH5 581 aa18.16■□□□□ 0.5
CD9-209ENST00000540891 ADSSL1Q8N142 457 aa18.16■□□□□ 0.5
CD9-209ENST00000540891 TTC9BQ8N6N2 239 aa18.16■□□□□ 0.5
CD9-209ENST00000540891 TOP6BLQ8N6T0 577 aa18.16■□□□□ 0.5
CD9-209ENST00000540891 MYADMQ96S97 322 aa18.16■□□□□ 0.5
CD9-209ENST00000540891 POLIQ9UNA4 740 aa18.16■□□□□ 0.5
CD9-209ENST00000540891 DOCK6Q96HP0 2047 aa18.15■□□□□ 0.5
CD9-209ENST00000540891 HCRTO43612 131 aa18.15■□□□□ 0.5
CD9-209ENST00000540891 HUS1O60921 280 aa18.15■□□□□ 0.5
CD9-209ENST00000540891 CD44P16070 742 aaKnown RBP18.15■□□□□ 0.5
CD9-209ENST00000540891 MYO1EQ12965 1108 aa18.15■□□□□ 0.5
CD9-209ENST00000540891 DUSP4Q13115 394 aa18.15■□□□□ 0.5
CD9-209ENST00000540891 THEM5Q8N1Q8 247 aa18.15■□□□□ 0.5
CD9-209ENST00000540891 ATAD1Q8NBU5 361 aa18.15■□□□□ 0.5
CD9-209ENST00000540891 TMC2Q8TDI7 906 aa18.15■□□□□ 0.5
CD9-209ENST00000540891 KBTBD7Q8WVZ9 684 aa18.15■□□□□ 0.5
CD9-209ENST00000540891 XYLT2Q9H1B5 865 aa18.15■□□□□ 0.5
CD9-209ENST00000540891 C11orf16Q9NQ32 467 aa18.15■□□□□ 0.5
CD9-209ENST00000540891 FRMD4BQ9Y2L6 1034 aa18.15■□□□□ 0.5
CD9-209ENST00000540891 YIPF1Q9Y548 306 aa18.15■□□□□ 0.5
CD9-209ENST00000540891 NOTCH4Q99466 2003 aa18.15■□□□□ 0.5
CD9-209ENST00000540891 GABRDO14764 452 aa18.14■□□□□ 0.49
CD9-209ENST00000540891 VNN1O95497 513 aa18.14■□□□□ 0.49
CD9-209ENST00000540891 STAU1O95793 577 aaKnown RBP18.14■□□□□ 0.49
CD9-209ENST00000540891 LRG1P02750 347 aa18.14■□□□□ 0.49
CD9-209ENST00000540891 ALADP13716 330 aa18.14■□□□□ 0.49
CD9-209ENST00000540891 FSHRP23945 695 aa18.14■□□□□ 0.49
CD9-209ENST00000540891 RPL13P26373 211 aaKnown RBP18.14■□□□□ 0.49
CD9-209ENST00000540891 CDR1P51861 262 aa18.14■□□□□ 0.49
CD9-209ENST00000540891 AP3M2P53677 418 aa18.14■□□□□ 0.49
CD9-209ENST00000540891 MCCD1P59942 119 aaPredicted RBP18.14■□□□□ 0.49
CD9-209ENST00000540891 MYL6P60660 151 aa18.14■□□□□ 0.49
CD9-209ENST00000540891 TWF1Q12792 350 aa18.14■□□□□ 0.49
CD9-209ENST00000540891 ADAM9Q13443 819 aa18.14■□□□□ 0.49
CD9-209ENST00000540891 SLC39A12Q504Y0 691 aa18.14■□□□□ 0.49
CD9-209ENST00000540891 GET4Q7L5D6 327 aaPredicted RBP18.14■□□□□ 0.49
CD9-209ENST00000540891 ZC3H3Q8IXZ2 948 aaKnown RBP18.14■□□□□ 0.49
CD9-209ENST00000540891 ADGRF2Q8IZF7 708 aa18.14■□□□□ 0.49
CD9-209ENST00000540891 TMEM86AQ8N2M4 240 aa18.14■□□□□ 0.49
CD9-209ENST00000540891 PLCD3Q8N3E9 789 aa18.14■□□□□ 0.49
CD9-209ENST00000540891 ACSF2Q96CM8 615 aaPredicted RBP18.14■□□□□ 0.49
CD9-209ENST00000540891 EEF2KMTQ96G04 330 aa18.14■□□□□ 0.49
CD9-209ENST00000540891 IPO9Q96P70 1041 aaKnown RBP18.14■□□□□ 0.49
CD9-209ENST00000540891 TMLHEQ9NVH6 421 aa18.14■□□□□ 0.49
CD9-209ENST00000540891 DDX43Q9NXZ2 648 aaKnown RBP18.14■□□□□ 0.49
CD9-209ENST00000540891 CEP72Q9P209 647 aa18.14■□□□□ 0.49
CD9-209ENST00000540891 LIMD1Q9UGP4 676 aa18.14■□□□□ 0.49
CD9-209ENST00000540891 R3HCC1Q9Y3T6 440 aaKnown RBP18.14■□□□□ 0.49
CD9-209ENST00000540891 NRG2O14511 850 aaPredicted RBP18.13■□□□□ 0.49
CD9-209ENST00000540891 ASGR2P07307 311 aa18.13■□□□□ 0.49
CD9-209ENST00000540891 ACAT1P24752 427 aaKnown RBP18.13■□□□□ 0.49
CD9-209ENST00000540891 GBP2P32456 591 aaPredicted RBP18.13■□□□□ 0.49
CD9-209ENST00000540891 PSMC2P35998 433 aaKnown RBP18.13■□□□□ 0.49
CD9-209ENST00000540891 VAMP7P51809 220 aa18.13■□□□□ 0.49
CD9-209ENST00000540891 MORC3Q14149 939 aa18.13■□□□□ 0.49
CD9-209ENST00000540891 PTPN21Q16825 1174 aa18.13■□□□□ 0.49
CD9-209ENST00000540891 ZACNQ401N2 412 aa18.13■□□□□ 0.49
CD9-209ENST00000540891 ANKRD40Q6AI12 368 aa18.13■□□□□ 0.49
CD9-209ENST00000540891 DPH6Q7L8W6 267 aa18.13■□□□□ 0.49
CD9-209ENST00000540891 FAM186BQ8IYM0 893 aa18.13■□□□□ 0.49
CD9-209ENST00000540891 ITFG1Q8TB96 612 aa18.13■□□□□ 0.49
CD9-209ENST00000540891 SPATA18Q8TC71 538 aa18.13■□□□□ 0.49
CD9-209ENST00000540891 PKMYT1Q99640 499 aa18.13■□□□□ 0.49
CD9-209ENST00000540891 ACBD6Q9BR61 282 aa18.13■□□□□ 0.49
CD9-209ENST00000540891 DNAJC25Q9H1X3 360 aa18.13■□□□□ 0.49
CD9-209ENST00000540891 EPS15L1Q9UBC2 864 aa18.13■□□□□ 0.49
CD9-209ENST00000540891 SLC27A5Q9Y2P5 690 aa18.13■□□□□ 0.49
CD9-209ENST00000540891 NME7Q9Y5B8 376 aa18.13■□□□□ 0.49
CD9-209ENST00000540891 DOCK8Q8NF50 2099 aa18.12■□□□□ 0.49
CD9-209ENST00000540891 TRIM49BA6NDI0 452 aa18.12■□□□□ 0.49
CD9-209ENST00000540891 IKBKBO14920 756 aa18.12■□□□□ 0.49
CD9-209ENST00000540891 SOAT2O75908 522 aa18.12■□□□□ 0.49
CD9-209ENST00000540891 RHOP08100 348 aa18.12■□□□□ 0.49
CD9-209ENST00000540891 PPP3CAQ08209 521 aa18.12■□□□□ 0.49
CD9-209ENST00000540891 BIRC3Q13489 604 aa18.12■□□□□ 0.49
CD9-209ENST00000540891 TRPC3Q13507 836 aa18.12■□□□□ 0.49
CD9-209ENST00000540891 CCDC142Q17RM4 750 aa18.12■□□□□ 0.49
CD9-209ENST00000540891 SLC5A9Q2M3M2 681 aa18.12■□□□□ 0.49
CD9-209ENST00000540891 PABPC1LQ4VXU2 614 aaKnown RBP18.12■□□□□ 0.49
CD9-209ENST00000540891 INTS6LQ5JSJ4 861 aaKnown RBP18.12■□□□□ 0.49
CD9-209ENST00000540891 POTEHQ6S545 545 aa18.12■□□□□ 0.49
CD9-209ENST00000540891 INTS8Q75QN2 995 aaKnown RBP18.12■□□□□ 0.49
CD9-209ENST00000540891 SV2AQ7L0J3 742 aa18.12■□□□□ 0.49
CD9-209ENST00000540891 ELMO3Q96BJ8 720 aa18.12■□□□□ 0.49
CD9-209ENST00000540891 MRPL45Q9BRJ2 306 aaKnown RBP18.12■□□□□ 0.49
CD9-209ENST00000540891 MKNK1Q9BUB5 465 aa18.12■□□□□ 0.49
CD9-209ENST00000540891 GTPBP4Q9BZE4 634 aaKnown RBP18.12■□□□□ 0.49
CD9-209ENST00000540891 VRTNQ9H8Y1 702 aa18.12■□□□□ 0.49
CD9-209ENST00000540891 AVENQ9NQS1 362 aaPredicted RBP18.12■□□□□ 0.49
CD9-209ENST00000540891 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.12■□□□□ 0.49
CD9-209ENST00000540891 HSFX1Q9UBD0 423 aa18.12■□□□□ 0.49
CD9-209ENST00000540891 PPP1R3GB7ZBB8 358 aa18.11■□□□□ 0.49
CD9-209ENST00000540891 BIN1O00499 593 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms