RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 RPL26L1Q9UNX3 145 aaKnown RBP5.52□□□□□ -1.53
PROM1-220ENST00000540805 ASTN1O14525 1302 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 GOLGA8IPA6NC78 632 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 GOLGA8JA6NMD2 632 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 USP17L10C9JJH3 530 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 F5H6K3 240 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 LRRN2O75325 713 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 TTC4O95801 387 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 MYL3P08590 195 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 KCNA4P22459 653 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 EPHB2P29323 1055 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 VHLP40337 213 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 MAGEA8P43361 318 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 SLC12A3P55017 1021 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 MAP3K10Q02779 954 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 KRT17Q04695 432 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 ITKQ08881 620 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 MPP2Q14168 576 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 MESDQ14696 234 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 ZNF568Q3ZCX4 644 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 ARSHQ5FYA8 562 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 POTEGQ6S5H5 508 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 CAPN12Q6ZSI9 719 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 ZNF365Q70YC5 407 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 EPM2AIP1Q7L775 607 aaPredicted RBP5.51□□□□□ -1.53
PROM1-220ENST00000540805 FAM186BQ8IYM0 893 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 ADGRF4Q8IZF3 695 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 LRRC8CQ8TDW0 803 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 ATP6V0A1Q93050 837 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 TRAPPC9Q96Q05 1148 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 CCDC77Q9BR77 488 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 SYT11Q9BT88 431 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 TBC1D10AQ9BXI6 508 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 ADAM33Q9BZ11 813 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 KIAA1683Q9H0B3 1180 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 WNT8AQ9H1J5 351 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.51□□□□□ -1.53
PROM1-220ENST00000540805 GGA3Q9NZ52 723 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 TBK1Q9UHD2 729 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 CHKBQ9Y259 395 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 STARD13Q9Y3M8 1113 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 HEMK1Q9Y5R4 338 aaPredicted RBP5.51□□□□□ -1.53
PROM1-220ENST00000540805 PRRC2BQ5JSZ5 2229 aaKnown RBP5.51□□□□□ -1.53
PROM1-220ENST00000540805 DICER1Q9UPY3 1922 aaKnown RBP5.51□□□□□ -1.53
PROM1-220ENST00000540805 BOLA2-SMG1P6H3BVE0 249 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 CDH16O75309 829 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 MED24O75448 989 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 OR6B1O95007 311 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 FOSP01100 380 aaPredicted RBP5.51□□□□□ -1.53
PROM1-220ENST00000540805 VIL1P09327 827 aaKnown RBP5.51□□□□□ -1.53
PROM1-220ENST00000540805 CD58P19256 250 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 COMTP21964 271 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 MAN1A1P33908 653 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 CHKAP35790 457 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 PSMC4P43686 418 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 GIT2Q14161 759 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 ZNF394Q53GI3 561 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 CATSPER4Q7RTX7 472 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 RSPH3Q86UC2 560 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 TTC30AQ86WT1 665 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 ZDHHC14Q8IZN3 488 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 C12orf50Q8NA57 414 aaPredicted RBP5.51□□□□□ -1.53
PROM1-220ENST00000540805 MORC4Q8TE76 937 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 REEP2Q9BRK0 252 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 SYT17Q9BSW7 474 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 DCLRE1BQ9H816 532 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 AAASQ9NRG9 546 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 RNF146Q9NTX7 359 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 DNAJC17Q9NVM6 304 aaKnown RBP5.51□□□□□ -1.53
PROM1-220ENST00000540805 LGALS13Q9UHV8 139 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 ZNF510Q9Y2H8 683 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 LRCH1Q9Y2L9 728 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 ACTL7BQ9Y614 415 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 SBF1O95248 1867 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 IQCA1LA6NCM1 817 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 GOLGA8SH3BPF8 625 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 PFDN1O60925 122 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 STAMBPO95630 424 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 TNNC2P02585 160 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 GSTA2P09210 222 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 SKIP12755 728 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 FOXN2P32314 431 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 PSMC2P35998 433 aaKnown RBP5.51□□□□□ -1.53
PROM1-220ENST00000540805 FMO5P49326 533 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 SNX16P57768 344 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 DYNC1I2Q13409 638 aaKnown RBP5.51□□□□□ -1.53
PROM1-220ENST00000540805 RCN2Q14257 317 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 TMED2Q15363 201 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 BMT2Q1RMZ1 405 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 PABPC1LQ4VXU2 614 aaKnown RBP5.51□□□□□ -1.53
PROM1-220ENST00000540805 ASPRV1Q53RT3 343 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 LIN9Q5TKA1 542 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 RFWD3Q6PCD5 774 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 RAB3IL1Q8TBN0 382 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 RAET1EQ8TD07 263 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 SNF8Q96H20 258 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 ZNF333Q96JL9 665 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 AGBL1Q96MI9 1066 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 AGPAT1Q99943 283 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 INTS2Q9H0H0 1204 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms