RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 MTIF2P46199 727 aaKnown RBP17.95■□□□□ 0.46
UBC-208ENST00000540700 MXI1P50539 228 aa17.95■□□□□ 0.46
UBC-208ENST00000540700 AP3M2P53677 418 aa17.95■□□□□ 0.46
UBC-208ENST00000540700 RBP5P82980 135 aa17.95■□□□□ 0.46
UBC-208ENST00000540700 NCOA4Q13772 614 aa17.95■□□□□ 0.46
UBC-208ENST00000540700 KRT39Q6A163 491 aa17.95■□□□□ 0.46
UBC-208ENST00000540700 SPOPLQ6IQ16 392 aa17.95■□□□□ 0.46
UBC-208ENST00000540700 TMEM105Q8N8V8 129 aa17.95■□□□□ 0.46
UBC-208ENST00000540700 RNF214Q8ND24 703 aa17.95■□□□□ 0.46
UBC-208ENST00000540700 TCF25Q9BQ70 676 aa17.95■□□□□ 0.46
UBC-208ENST00000540700 TUBGCP2Q9BSJ2 902 aa17.95■□□□□ 0.46
UBC-208ENST00000540700 PI4K2AQ9BTU6 479 aa17.95■□□□□ 0.46
UBC-208ENST00000540700 SMOC2Q9H3U7 446 aa17.95■□□□□ 0.46
UBC-208ENST00000540700 APOBEC3GQ9HC16 384 aaKnown RBP17.95■□□□□ 0.46
UBC-208ENST00000540700 ENTPD7Q9NQZ7 604 aa17.95■□□□□ 0.46
UBC-208ENST00000540700 LIMA1Q9UHB6 759 aaKnown RBP17.95■□□□□ 0.46
UBC-208ENST00000540700 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.95■□□□□ 0.46
UBC-208ENST00000540700 SMTNL1A8MU46 457 aa17.94■□□□□ 0.46
UBC-208ENST00000540700 HIDE1A8MVS5 230 aa17.94■□□□□ 0.46
UBC-208ENST00000540700 TADA2AO75478 443 aa17.94■□□□□ 0.46
UBC-208ENST00000540700 AFPP02771 609 aaKnown RBP17.94■□□□□ 0.46
UBC-208ENST00000540700 EEF1GP26641 437 aaKnown RBP17.94■□□□□ 0.46
UBC-208ENST00000540700 TKTP29401 623 aaKnown RBP17.94■□□□□ 0.46
UBC-208ENST00000540700 PPM1AP35813 382 aa17.94■□□□□ 0.46
UBC-208ENST00000540700 NUBP1P53384 320 aa17.94■□□□□ 0.46
UBC-208ENST00000540700 MTMR3Q13615 1198 aa17.94■□□□□ 0.46
UBC-208ENST00000540700 MAN2A1Q16706 1144 aa17.94■□□□□ 0.46
UBC-208ENST00000540700 DDX53Q86TM3 631 aaKnown RBP17.94■□□□□ 0.46
UBC-208ENST00000540700 FAM114A1Q8IWE2 563 aa17.94■□□□□ 0.46
UBC-208ENST00000540700 LRRC52Q8N7C0 313 aa17.94■□□□□ 0.46
UBC-208ENST00000540700 LMO3Q8TAP4 145 aa17.94■□□□□ 0.46
UBC-208ENST00000540700 AUTS2Q8WXX7 1259 aa17.94■□□□□ 0.46
UBC-208ENST00000540700 TMEM169Q96HH4 297 aa17.94■□□□□ 0.46
UBC-208ENST00000540700 HERC2P3Q9BVR0 1158 aa17.94■□□□□ 0.46
UBC-208ENST00000540700 ZBP1Q9H171 429 aa17.94■□□□□ 0.46
UBC-208ENST00000540700 RBSNQ9H1K0 784 aa17.94■□□□□ 0.46
UBC-208ENST00000540700 MAGEC2Q9UBF1 373 aaPredicted RBP17.94■□□□□ 0.46
UBC-208ENST00000540700 POLIQ9UNA4 740 aa17.94■□□□□ 0.46
UBC-208ENST00000540700 COQ4Q9Y3A0 265 aa17.94■□□□□ 0.46
UBC-208ENST00000540700 NR2E1Q9Y466 385 aa17.94■□□□□ 0.46
UBC-208ENST00000540700 BECN2A8MW95 431 aa17.93■□□□□ 0.46
UBC-208ENST00000540700 C2CD4DB7Z1M9 353 aa17.93■□□□□ 0.46
UBC-208ENST00000540700 PIK3CAP42336 1068 aa17.93■□□□□ 0.46
UBC-208ENST00000540700 TAF6P49848 677 aa17.93■□□□□ 0.46
UBC-208ENST00000540700 MYL7Q01449 175 aa17.93■□□□□ 0.46
UBC-208ENST00000540700 VWA3BQ502W6 1294 aa17.93■□□□□ 0.46
UBC-208ENST00000540700 RTP2Q5QGT7 225 aa17.93■□□□□ 0.46
UBC-208ENST00000540700 PDE12Q6L8Q7 609 aaKnown RBP17.93■□□□□ 0.46
UBC-208ENST00000540700 TMEM184AQ6ZMB5 413 aa17.93■□□□□ 0.46
UBC-208ENST00000540700 USP37Q86T82 979 aa17.93■□□□□ 0.46
UBC-208ENST00000540700 HPDLQ96IR7 371 aa17.93■□□□□ 0.46
UBC-208ENST00000540700 SUSD3Q96L08 255 aa17.93■□□□□ 0.46
UBC-208ENST00000540700 VPS16Q9H269 839 aa17.93■□□□□ 0.46
UBC-208ENST00000540700 PUF60Q9UHX1 559 aaKnown RBP17.93■□□□□ 0.46
UBC-208ENST00000540700 NME7Q9Y5B8 376 aa17.93■□□□□ 0.46
UBC-208ENST00000540700 TIMM13Q9Y5L4 95 aaPredicted RBP17.93■□□□□ 0.46
UBC-208ENST00000540700 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.93■□□□□ 0.46
UBC-208ENST00000540700 VWA8A3KMH1 1905 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 M0QZQ0 153 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 PMM2O15305 246 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 PHACTR2O75167 634 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 STAU1O95793 577 aaKnown RBP17.92■□□□□ 0.46
UBC-208ENST00000540700 CAVIN2O95810 425 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 ASS1P00966 412 aaKnown RBP17.92■□□□□ 0.46
UBC-208ENST00000540700 SOD2P04179 222 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 PRKCSHP14314 528 aaPredicted RBP17.92■□□□□ 0.46
UBC-208ENST00000540700 FGFR3P22607 806 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 NBL1P41271 181 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 COPB1P53618 953 aaKnown RBP17.92■□□□□ 0.46
UBC-208ENST00000540700 APBA1Q02410 837 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 KCNC3Q14003 757 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 FAM171A1Q5VUB5 890 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 DPY19L2P1Q6NXN4 242 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 LIMS2Q7Z4I7 341 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 UBALD2Q8IYN6 164 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 VPS52Q8N1B4 723 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 SENP8Q96LD8 212 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 ZNF560Q96MR9 790 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 SDCBP2Q9H190 292 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 NDST4Q9H3R1 872 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 VRTNQ9H8Y1 702 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 CHST7Q9NS84 486 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 RAB20Q9NX57 234 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 SORCS3Q9UPU3 1222 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 NUB1Q9Y5A7 615 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 TSC2P49815 1807 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 PLXNA3P51805 1871 aa17.92■□□□□ 0.46
UBC-208ENST00000540700 SF3B1O75533 1304 aaKnown RBP eCLIP17.92■□□□□ 0.46
UBC-208ENST00000540700 EP300Q09472 2414 aaPredicted RBP17.91■□□□□ 0.46
UBC-208ENST00000540700 LRRC10BA6NIK2 292 aa17.91■□□□□ 0.46
UBC-208ENST00000540700 KPNA7A9QM74 516 aa17.91■□□□□ 0.46
UBC-208ENST00000540700 HCRTO43612 131 aa17.91■□□□□ 0.46
UBC-208ENST00000540700 STX10O60499 249 aa17.91■□□□□ 0.46
UBC-208ENST00000540700 LILRB3O75022 631 aa17.91■□□□□ 0.46
UBC-208ENST00000540700 ASGR2P07307 311 aa17.91■□□□□ 0.46
UBC-208ENST00000540700 WEE2P0C1S8 567 aa17.91■□□□□ 0.46
UBC-208ENST00000540700 KCNMA1Q12791 1236 aa17.91■□□□□ 0.46
UBC-208ENST00000540700 TRPC3Q13507 836 aa17.91■□□□□ 0.46
UBC-208ENST00000540700 SV2CQ496J9 727 aa17.91■□□□□ 0.46
UBC-208ENST00000540700 TMC7Q7Z402 723 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms