RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 TASP1Q9H6P5 420 aa21.67■■□□□ 1.06
LPCAT3-210ENST00000540090 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.67■■□□□ 1.06
LPCAT3-210ENST00000540090 KCND2Q9NZV8 630 aa21.67■■□□□ 1.06
LPCAT3-210ENST00000540090 H0YCG3 227 aa21.66■■□□□ 1.06
LPCAT3-210ENST00000540090 PPEF2O14830 753 aa21.66■■□□□ 1.06
LPCAT3-210ENST00000540090 FAM189A1O60320 539 aa21.66■■□□□ 1.06
LPCAT3-210ENST00000540090 SOAT2O75908 522 aa21.66■■□□□ 1.06
LPCAT3-210ENST00000540090 PAX3P23760 479 aa21.66■■□□□ 1.06
LPCAT3-210ENST00000540090 CACNB1Q02641 598 aaPredicted RBP21.66■■□□□ 1.06
LPCAT3-210ENST00000540090 TNK2Q07912 1038 aa21.66■■□□□ 1.06
LPCAT3-210ENST00000540090 ZRSR1Q15695 479 aaKnown RBP21.66■■□□□ 1.06
LPCAT3-210ENST00000540090 ENOX2Q16206 610 aaKnown RBP21.66■■□□□ 1.06
LPCAT3-210ENST00000540090 SPATA1Q5VX52 437 aa21.66■■□□□ 1.06
LPCAT3-210ENST00000540090 SENP8Q96LD8 212 aa21.66■■□□□ 1.06
LPCAT3-210ENST00000540090 LARSQ9P2J5 1176 aaKnown RBP21.66■■□□□ 1.06
LPCAT3-210ENST00000540090 CHD8Q9HCK8 2581 aa21.65■■□□□ 1.06
LPCAT3-210ENST00000540090 MAP1BP46821 2468 aaKnown RBP21.65■■□□□ 1.06
LPCAT3-210ENST00000540090 PRAMEF12O95522 483 aa21.65■■□□□ 1.06
LPCAT3-210ENST00000540090 TUFMP49411 452 aaKnown RBP21.65■■□□□ 1.06
LPCAT3-210ENST00000540090 LIMK1P53667 647 aa21.65■■□□□ 1.06
LPCAT3-210ENST00000540090 NCKAP1LP55160 1127 aa21.65■■□□□ 1.06
LPCAT3-210ENST00000540090 BICD1Q96G01 975 aa21.65■■□□□ 1.06
LPCAT3-210ENST00000540090 LOXL4Q96JB6 756 aa21.65■■□□□ 1.06
LPCAT3-210ENST00000540090 ZSCAN31Q96LW9 406 aaPredicted RBP21.65■■□□□ 1.06
LPCAT3-210ENST00000540090 RPF1Q9H9Y2 349 aaKnown RBP21.65■■□□□ 1.06
LPCAT3-210ENST00000540090 IL21Q9HBE4 155 aa21.65■■□□□ 1.06
LPCAT3-210ENST00000540090 CCDC163A0A0D9SF12 145 aa21.64■■□□□ 1.05
LPCAT3-210ENST00000540090 TM4SF5O14894 197 aa21.64■■□□□ 1.05
LPCAT3-210ENST00000540090 OGTO15294 1046 aa21.64■■□□□ 1.05
LPCAT3-210ENST00000540090 EXTL3O43909 919 aa21.64■■□□□ 1.05
LPCAT3-210ENST00000540090 PLA2G4BP0C869 781 aa21.64■■□□□ 1.05
LPCAT3-210ENST00000540090 ODC1P11926 461 aa21.64■■□□□ 1.05
LPCAT3-210ENST00000540090 ITPRIPL2Q3MIP1 535 aa21.64■■□□□ 1.05
LPCAT3-210ENST00000540090 ARSHQ5FYA8 562 aa21.64■■□□□ 1.05
LPCAT3-210ENST00000540090 CD302Q8IX05 232 aa21.64■■□□□ 1.05
LPCAT3-210ENST00000540090 OR10T2Q8NGX3 314 aa21.64■■□□□ 1.05
LPCAT3-210ENST00000540090 CHAMP1Q96JM3 812 aa21.64■■□□□ 1.05
LPCAT3-210ENST00000540090 THG1LQ9NWX6 298 aaKnown RBP21.64■■□□□ 1.05
LPCAT3-210ENST00000540090 PDCD11Q14690 1871 aaKnown RBP21.64■■□□□ 1.05
LPCAT3-210ENST00000540090 CNOT1A5YKK6 2376 aaKnown RBP21.63■■□□□ 1.05
LPCAT3-210ENST00000540090 SDK1Q7Z5N4 2213 aa21.63■■□□□ 1.05
LPCAT3-210ENST00000540090 NPHP3-ACAD11A0A0J9YXS1 232 aa21.63■■□□□ 1.05
LPCAT3-210ENST00000540090 PIRO00625 290 aa21.63■■□□□ 1.05
LPCAT3-210ENST00000540090 AXIN1O15169 862 aa21.63■■□□□ 1.05
LPCAT3-210ENST00000540090 PIGRP01833 764 aa21.63■■□□□ 1.05
LPCAT3-210ENST00000540090 CYP11A1P05108 521 aa21.63■■□□□ 1.05
LPCAT3-210ENST00000540090 ZNF806P0C7X5 589 aa21.63■■□□□ 1.05
LPCAT3-210ENST00000540090 CDC25CP30307 473 aa21.63■■□□□ 1.05
LPCAT3-210ENST00000540090 LIG4P49917 911 aa21.63■■□□□ 1.05
LPCAT3-210ENST00000540090 PTPAQ15257 358 aa21.63■■□□□ 1.05
LPCAT3-210ENST00000540090 C9orf57Q5W0N0 161 aa21.63■■□□□ 1.05
LPCAT3-210ENST00000540090 IL31Q6EBC2 164 aa21.63■■□□□ 1.05
LPCAT3-210ENST00000540090 GAB3Q8WWW8 586 aa21.63■■□□□ 1.05
LPCAT3-210ENST00000540090 PLIN2Q99541 437 aa21.63■■□□□ 1.05
LPCAT3-210ENST00000540090 LPIN3Q9BQK8 851 aa21.63■■□□□ 1.05
LPCAT3-210ENST00000540090 FAM83CQ9BQN1 747 aa21.63■■□□□ 1.05
LPCAT3-210ENST00000540090 SLC46A2Q9BY10 475 aa21.63■■□□□ 1.05
LPCAT3-210ENST00000540090 ARRDC1-AS1Q9H2J1 176 aa21.63■■□□□ 1.05
LPCAT3-210ENST00000540090 SH2B1Q9NRF2 756 aaPredicted RBP21.63■■□□□ 1.05
LPCAT3-210ENST00000540090 TBX20Q9UMR3 447 aa21.63■■□□□ 1.05
LPCAT3-210ENST00000540090 CFAP47Q6ZTR5 3102 aa21.62■■□□□ 1.05
LPCAT3-210ENST00000540090 SEC24BO95487 1268 aa21.62■■□□□ 1.05
LPCAT3-210ENST00000540090 ATF6P18850 670 aa21.62■■□□□ 1.05
LPCAT3-210ENST00000540090 SCP2P22307 547 aa21.62■■□□□ 1.05
LPCAT3-210ENST00000540090 RAP1GAPP47736 663 aa21.62■■□□□ 1.05
LPCAT3-210ENST00000540090 MCM2P49736 904 aa21.62■■□□□ 1.05
LPCAT3-210ENST00000540090 CYP4F8P98187 520 aa21.62■■□□□ 1.05
LPCAT3-210ENST00000540090 ATP2C1P98194 919 aaPredicted RBP21.62■■□□□ 1.05
LPCAT3-210ENST00000540090 VEPH1Q14D04 833 aa21.62■■□□□ 1.05
LPCAT3-210ENST00000540090 TMEM196Q5HYL7 178 aa21.62■■□□□ 1.05
LPCAT3-210ENST00000540090 JADE1Q6IE81 842 aa21.62■■□□□ 1.05
LPCAT3-210ENST00000540090 PKN3Q6P5Z2 889 aa21.62■■□□□ 1.05
LPCAT3-210ENST00000540090 CACNA2D4Q7Z3S7 1137 aa21.62■■□□□ 1.05
LPCAT3-210ENST00000540090 SEPT5Q99719 369 aaPredicted RBP21.62■■□□□ 1.05
LPCAT3-210ENST00000540090 ZCWPW1Q9H0M4 648 aa21.62■■□□□ 1.05
LPCAT3-210ENST00000540090 GKN1Q9NS71 199 aa21.62■■□□□ 1.05
LPCAT3-210ENST00000540090 ZMYM5Q9UJ78 669 aa21.62■■□□□ 1.05
LPCAT3-210ENST00000540090 A0A0B4J269 797 aa21.61■■□□□ 1.05
LPCAT3-210ENST00000540090 ANO9A1A5B4 782 aa21.61■■□□□ 1.05
LPCAT3-210ENST00000540090 HNRNPDLO14979 420 aaKnown RBP21.61■■□□□ 1.05
LPCAT3-210ENST00000540090 SF3A2Q15428 464 aaKnown RBP21.61■■□□□ 1.05
LPCAT3-210ENST00000540090 MGAT5BQ3V5L5 792 aa21.61■■□□□ 1.05
LPCAT3-210ENST00000540090 AASDHQ4L235 1098 aaPredicted RBP21.61■■□□□ 1.05
LPCAT3-210ENST00000540090 TMEM119Q4V9L6 283 aa21.61■■□□□ 1.05
LPCAT3-210ENST00000540090 SLC39A12Q504Y0 691 aa21.61■■□□□ 1.05
LPCAT3-210ENST00000540090 FAM212AQ96EL1 285 aa21.61■■□□□ 1.05
LPCAT3-210ENST00000540090 SMG9Q9H0W8 520 aaKnown RBP21.61■■□□□ 1.05
LPCAT3-210ENST00000540090 CPSF3Q9UKF6 684 aaKnown RBP21.61■■□□□ 1.05
LPCAT3-210ENST00000540090 DSEQ9UL01 958 aa21.61■■□□□ 1.05
LPCAT3-210ENST00000540090 ODF2LQ9ULJ1 636 aa21.61■■□□□ 1.05
LPCAT3-210ENST00000540090 RALGAPA1Q6GYQ0 2036 aa21.6■■□□□ 1.05
LPCAT3-210ENST00000540090 TRDMT1O14717 391 aaKnown RBP21.6■■□□□ 1.05
LPCAT3-210ENST00000540090 ATG13O75143 517 aa21.6■■□□□ 1.05
LPCAT3-210ENST00000540090 RPP40O75818 363 aaKnown RBP21.6■■□□□ 1.05
LPCAT3-210ENST00000540090 EPN2O95208 641 aa21.6■■□□□ 1.05
LPCAT3-210ENST00000540090 PMLP29590 882 aa21.6■■□□□ 1.05
LPCAT3-210ENST00000540090 PXNP49023 591 aaPredicted RBP21.6■■□□□ 1.05
LPCAT3-210ENST00000540090 GRSF1Q12849 480 aaKnown RBP eCLIP21.6■■□□□ 1.05
LPCAT3-210ENST00000540090 RILPL1Q5EBL4 403 aa21.6■■□□□ 1.05
LPCAT3-210ENST00000540090 N4BP2L1Q5TBK1 243 aaPredicted RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms