RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 CNGA2Q16280 664 aa18.22■□□□□ 0.51
LTBR-207ENST00000539925 CXCL17Q6UXB2 119 aa18.22■□□□□ 0.51
LTBR-207ENST00000539925 PXYLP1Q8TE99 480 aa18.22■□□□□ 0.51
LTBR-207ENST00000539925 EIF2AQ9BY44 585 aaKnown RBP18.22■□□□□ 0.51
LTBR-207ENST00000539925 MTUS1Q9ULD2 1270 aa18.22■□□□□ 0.51
LTBR-207ENST00000539925 L1RE1Q9UN81 338 aa18.22■□□□□ 0.51
LTBR-207ENST00000539925 PGK1P00558 417 aa18.22■□□□□ 0.51
LTBR-207ENST00000539925 FGGP02679 453 aa18.22■□□□□ 0.51
LTBR-207ENST00000539925 FAM163BP0C2L3 166 aa18.22■□□□□ 0.51
LTBR-207ENST00000539925 PRKAR2AP13861 404 aaKnown RBP18.22■□□□□ 0.51
LTBR-207ENST00000539925 PEX5P50542 639 aa18.22■□□□□ 0.51
LTBR-207ENST00000539925 MMS22LQ6ZRQ5 1243 aa18.22■□□□□ 0.51
LTBR-207ENST00000539925 RNF180Q86T96 592 aa18.22■□□□□ 0.51
LTBR-207ENST00000539925 UNC93AQ86WB7 457 aa18.22■□□□□ 0.51
LTBR-207ENST00000539925 PASD1Q8IV76 773 aa18.22■□□□□ 0.51
LTBR-207ENST00000539925 FEZF2Q8TBJ5 459 aa18.22■□□□□ 0.51
LTBR-207ENST00000539925 TMEM40Q8WWA1 233 aa18.22■□□□□ 0.51
LTBR-207ENST00000539925 NT5C1AQ9BXI3 368 aa18.22■□□□□ 0.51
LTBR-207ENST00000539925 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.22■□□□□ 0.51
LTBR-207ENST00000539925 EHD2Q9NZN4 543 aa18.22■□□□□ 0.51
LTBR-207ENST00000539925 GPR182O15218 404 aa18.21■□□□□ 0.51
LTBR-207ENST00000539925 PSTPIP1O43586 416 aa18.21■□□□□ 0.51
LTBR-207ENST00000539925 CAND2O75155 1236 aa18.21■□□□□ 0.51
LTBR-207ENST00000539925 PRMT2P55345 433 aa18.21■□□□□ 0.51
LTBR-207ENST00000539925 SNX16P57768 344 aa18.21■□□□□ 0.51
LTBR-207ENST00000539925 ZNF394Q53GI3 561 aa18.21■□□□□ 0.51
LTBR-207ENST00000539925 SGO2Q562F6 1265 aa18.21■□□□□ 0.51
LTBR-207ENST00000539925 UBXN11Q5T124 520 aa18.21■□□□□ 0.51
LTBR-207ENST00000539925 DNAJC24Q6P3W2 148 aa18.21■□□□□ 0.51
LTBR-207ENST00000539925 KRT222Q8N1A0 295 aa18.21■□□□□ 0.51
LTBR-207ENST00000539925 SLC4A11Q8NBS3 891 aa18.21■□□□□ 0.51
LTBR-207ENST00000539925 KRT12Q99456 494 aa18.21■□□□□ 0.51
LTBR-207ENST00000539925 NXF3Q9H4D5 531 aaKnown RBP18.21■□□□□ 0.51
LTBR-207ENST00000539925 SMYD3Q9H7B4 428 aa18.21■□□□□ 0.51
LTBR-207ENST00000539925 SMARCAL1Q9NZC9 954 aa18.21■□□□□ 0.51
LTBR-207ENST00000539925 CDY2AQ9Y6F7 541 aa18.21■□□□□ 0.51
LTBR-207ENST00000539925 RPS6KA5O75582 802 aa18.2■□□□□ 0.5
LTBR-207ENST00000539925 CETN2P41208 172 aa18.2■□□□□ 0.5
LTBR-207ENST00000539925 PAK2Q13177 524 aa18.2■□□□□ 0.5
LTBR-207ENST00000539925 MAP3K21Q5TCX8 1036 aa18.2■□□□□ 0.5
LTBR-207ENST00000539925 TWF2Q6IBS0 349 aaKnown RBP18.2■□□□□ 0.5
LTBR-207ENST00000539925 EMBQ6PCB8 327 aa18.2■□□□□ 0.5
LTBR-207ENST00000539925 C3orf20Q8ND61 904 aa18.2■□□□□ 0.5
LTBR-207ENST00000539925 TFAP2BQ92481 460 aa18.2■□□□□ 0.5
LTBR-207ENST00000539925 ALG3Q92685 438 aa18.2■□□□□ 0.5
LTBR-207ENST00000539925 FUT8Q9BYC5 575 aa18.2■□□□□ 0.5
LTBR-207ENST00000539925 VIPAS39Q9H9C1 493 aa18.2■□□□□ 0.5
LTBR-207ENST00000539925 SLC38A7Q9NVC3 462 aa18.2■□□□□ 0.5
LTBR-207ENST00000539925 RNF216Q9NWF9 866 aaPredicted RBP18.2■□□□□ 0.5
LTBR-207ENST00000539925 FAM53CQ9NYF3 392 aa18.2■□□□□ 0.5
LTBR-207ENST00000539925 PARP2Q9UGN5 583 aa18.2■□□□□ 0.5
LTBR-207ENST00000539925 MAP2K7O14733 419 aa18.19■□□□□ 0.5
LTBR-207ENST00000539925 AOC2O75106 756 aa18.19■□□□□ 0.5
LTBR-207ENST00000539925 CALCAP01258 141 aa18.19■□□□□ 0.5
LTBR-207ENST00000539925 ASGR1P07306 291 aa18.19■□□□□ 0.5
LTBR-207ENST00000539925 EPHB4P54760 987 aa18.19■□□□□ 0.5
LTBR-207ENST00000539925 NNTQ13423 1086 aa18.19■□□□□ 0.5
LTBR-207ENST00000539925 PIGHQ14442 188 aaPredicted RBP18.19■□□□□ 0.5
LTBR-207ENST00000539925 KCNA10Q16322 511 aa18.19■□□□□ 0.5
LTBR-207ENST00000539925 FAM47CQ5HY64 1035 aa18.19■□□□□ 0.5
LTBR-207ENST00000539925 LRRC38Q5VT99 294 aa18.19■□□□□ 0.5
LTBR-207ENST00000539925 DCAF12L1Q5VU92 463 aa18.19■□□□□ 0.5
LTBR-207ENST00000539925 C9orf57Q5W0N0 161 aa18.19■□□□□ 0.5
LTBR-207ENST00000539925 SCARA3Q6AZY7 606 aa18.19■□□□□ 0.5
LTBR-207ENST00000539925 GDF6Q6KF10 455 aaPredicted RBP18.19■□□□□ 0.5
LTBR-207ENST00000539925 FAM228AQ86W67 206 aa18.19■□□□□ 0.5
LTBR-207ENST00000539925 RHOT1Q8IXI2 618 aa18.19■□□□□ 0.5
LTBR-207ENST00000539925 C1orf131Q8NDD1 294 aaKnown RBP18.19■□□□□ 0.5
LTBR-207ENST00000539925 WHAMMQ8TF30 809 aa18.19■□□□□ 0.5
LTBR-207ENST00000539925 SENP6Q9GZR1 1112 aaPredicted RBP18.19■□□□□ 0.5
LTBR-207ENST00000539925 SDCBP2Q9H190 292 aa18.19■□□□□ 0.5
LTBR-207ENST00000539925 GDF3Q9NR23 364 aa18.19■□□□□ 0.5
LTBR-207ENST00000539925 DDX20Q9UHI6 824 aaKnown RBP18.19■□□□□ 0.5
LTBR-207ENST00000539925 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.19■□□□□ 0.5
LTBR-207ENST00000539925 IPPQ9Y573 584 aa18.19■□□□□ 0.5
LTBR-207ENST00000539925 SQORQ9Y6N5 450 aa18.19■□□□□ 0.5
LTBR-207ENST00000539925 SMIM28A0A1B0GU29 152 aa18.18■□□□□ 0.5
LTBR-207ENST00000539925 MOXD2PA6NHM9 499 aa18.18■□□□□ 0.5
LTBR-207ENST00000539925 SART1O43290 800 aaKnown RBP18.18■□□□□ 0.5
LTBR-207ENST00000539925 HEXIM1O94992 359 aaKnown RBP18.18■□□□□ 0.5
LTBR-207ENST00000539925 SETSIPP0DME0 302 aa18.18■□□□□ 0.5
LTBR-207ENST00000539925 RAB27AP51159 221 aa18.18■□□□□ 0.5
LTBR-207ENST00000539925 APLP1P51693 650 aa18.18■□□□□ 0.5
LTBR-207ENST00000539925 RNASE9P60153 205 aaKnown RBP18.18■□□□□ 0.5
LTBR-207ENST00000539925 PTK7Q13308 1070 aa18.18■□□□□ 0.5
LTBR-207ENST00000539925 CUL1Q13616 776 aa18.18■□□□□ 0.5
LTBR-207ENST00000539925 DHX34Q14147 1143 aaKnown RBP18.18■□□□□ 0.5
LTBR-207ENST00000539925 ZNF268Q14587 947 aaPredicted RBP18.18■□□□□ 0.5
LTBR-207ENST00000539925 PTPROQ16827 1216 aa18.18■□□□□ 0.5
LTBR-207ENST00000539925 SV2CQ496J9 727 aa18.18■□□□□ 0.5
LTBR-207ENST00000539925 CCSAPQ6IQ19 270 aaPredicted RBP18.18■□□□□ 0.5
LTBR-207ENST00000539925 DPH6Q7L8W6 267 aa18.18■□□□□ 0.5
LTBR-207ENST00000539925 IPO4Q8TEX9 1081 aaKnown RBP18.18■□□□□ 0.5
LTBR-207ENST00000539925 HEXIM2Q96MH2 286 aaKnown RBP18.18■□□□□ 0.5
LTBR-207ENST00000539925 TSEN34Q9BSV6 310 aaKnown RBP18.18■□□□□ 0.5
LTBR-207ENST00000539925 ELOVL4Q9GZR5 314 aa18.18■□□□□ 0.5
LTBR-207ENST00000539925 RNF186Q9NXI6 227 aa18.18■□□□□ 0.5
LTBR-207ENST00000539925 GDAP2Q9NXN4 497 aa18.18■□□□□ 0.5
LTBR-207ENST00000539925 FAM187AA6NFU0 413 aa18.18■□□□□ 0.5
LTBR-207ENST00000539925 TMEM191CA6NGB0 347 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms