RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 RC3H2Q9HBD1 1191 aaKnown RBP8.19□□□□□ -1.1
GNE-205ENST00000539815 CCDC39Q9UFE4 941 aa8.19□□□□□ -1.1
GNE-205ENST00000539815 PAXBP1Q9Y5B6 917 aa8.19□□□□□ -1.1
GNE-205ENST00000539815 LRRC37A2A6NM11 1700 aa8.19□□□□□ -1.1
GNE-205ENST00000539815 MKI67P46013 3256 aaKnown RBP8.19□□□□□ -1.1
GNE-205ENST00000539815 MEIS3P2A8K0S8 358 aa8.19□□□□□ -1.1
GNE-205ENST00000539815 NRDCO43847 1150 aa8.19□□□□□ -1.1
GNE-205ENST00000539815 RPS6KB1P23443 525 aa8.19□□□□□ -1.1
GNE-205ENST00000539815 NEK4P51957 841 aa8.19□□□□□ -1.1
GNE-205ENST00000539815 STARD6P59095 220 aa8.19□□□□□ -1.1
GNE-205ENST00000539815 TFAMQ00059 246 aaKnown RBP8.19□□□□□ -1.1
GNE-205ENST00000539815 POSTNQ15063 836 aa8.19□□□□□ -1.1
GNE-205ENST00000539815 TRIM61Q5EBN2 209 aa8.19□□□□□ -1.1
GNE-205ENST00000539815 TRMT11Q7Z4G4 463 aaKnown RBP8.19□□□□□ -1.1
GNE-205ENST00000539815 COLGALT2Q8IYK4 626 aa8.19□□□□□ -1.1
GNE-205ENST00000539815 NEK11Q8NG66 645 aa8.19□□□□□ -1.1
GNE-205ENST00000539815 RNF39Q9H2S5 420 aa8.19□□□□□ -1.1
GNE-205ENST00000539815 SNX25Q9H3E2 840 aa8.19□□□□□ -1.1
GNE-205ENST00000539815 HCFC1R1Q9NWW0 138 aa8.19□□□□□ -1.1
GNE-205ENST00000539815 DLL3Q9NYJ7 618 aa8.19□□□□□ -1.1
GNE-205ENST00000539815 KIAA1024Q9UPX6 916 aa8.19□□□□□ -1.1
GNE-205ENST00000539815 AK5Q9Y6K8 562 aa8.19□□□□□ -1.1
GNE-205ENST00000539815 TSPAN1O60635 241 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 OR52Z1P0C646 297 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 CSH1P0DML2 217 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 CSH2P0DML3 217 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 NAMPTP43490 491 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 SFSWAPQ12872 951 aaKnown RBP8.18□□□□□ -1.1
GNE-205ENST00000539815 PDGFRLQ15198 375 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 UGCGQ16739 394 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 RTP2Q5QGT7 225 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 GOLGA6L1Q8N7Z2 621 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 MAB21L3Q8N8X9 362 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 STKLD1Q8NE28 680 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 HMGB4Q8WW32 186 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 PCDHB5Q9Y5E4 795 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 ATP8B3O60423 1300 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 FOXP2O15409 715 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 RRP8O43159 456 aaKnown RBP8.18□□□□□ -1.1
GNE-205ENST00000539815 TNNC2P02585 160 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 TKTP29401 623 aaKnown RBP8.18□□□□□ -1.1
GNE-205ENST00000539815 UNQ6494/PRO21346Q6UXR6 183 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 DPH6Q7L8W6 267 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 GIPC2Q8TF65 315 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 ELSPBP1Q96BH3 223 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 TBC1D32Q96NH3 1257 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 P2RY13Q9BPV8 354 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 TASP1Q9H6P5 420 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 COL11A1P12107 1806 aaPredicted RBP8.18□□□□□ -1.1
GNE-205ENST00000539815 LTBP2Q14767 1821 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 SPECC1L-ADORA2AF8WAN1 911 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 PCSK1P29120 753 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 MCM2P49736 904 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 SLC8A3P57103 927 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 MYO1EQ12965 1108 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 TTC31Q49AM3 519 aaPredicted RBP8.18□□□□□ -1.1
GNE-205ENST00000539815 SYNPOQ8N3V7 929 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 SDR16C5Q8N3Y7 309 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 HHIPQ96QV1 700 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 MSTO1Q9BUK6 570 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 TARS2Q9BW92 718 aaKnown RBP8.18□□□□□ -1.1
GNE-205ENST00000539815 TPSD1Q9BZJ3 242 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 CCDC86Q9H6F5 360 aaKnown RBP8.18□□□□□ -1.1
GNE-205ENST00000539815 KIF9Q9HAQ2 790 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 DUS2Q9NX74 493 aaKnown RBP8.18□□□□□ -1.1
GNE-205ENST00000539815 SLC27A5Q9Y2P5 690 aa8.18□□□□□ -1.1
GNE-205ENST00000539815 MORC2Q9Y6X9 1032 aaPredicted RBP8.18□□□□□ -1.1
GNE-205ENST00000539815 NOTCH2Q04721 2471 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 ANKRD33BA6NCL7 494 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 K7ENM7 598 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 CHADO15335 359 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 NEBLO76041 1014 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 CEBPBP17676 345 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 DRD1P21728 446 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 RPS9P46781 194 aaKnown RBP8.17□□□□□ -1.1
GNE-205ENST00000539815 ANO4Q32M45 955 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 Q4G0T1 1027 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 MRPL10Q7Z7H8 261 aaKnown RBP8.17□□□□□ -1.1
GNE-205ENST00000539815 CHPFQ8IZ52 775 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 KRT222Q8N1A0 295 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 DEFB124Q8NES8 71 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 PYM1Q9BRP8 204 aaKnown RBP8.17□□□□□ -1.1
GNE-205ENST00000539815 RPP25Q9BUL9 199 aaKnown RBP8.17□□□□□ -1.1
GNE-205ENST00000539815 IMPG2Q9BZV3 1241 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 ETAA1Q9NY74 926 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 YIPF1Q9Y548 306 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 PCDHGA5Q9Y5G8 931 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 MYH7BA7E2Y1 1941 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 SPTAN1Q13813 2472 aaKnown RBP8.17□□□□□ -1.1
GNE-205ENST00000539815 H0Y626 953 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 TRIM16O95361 564 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 CLTAP09496 248 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 ATF2P15336 505 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 HDCP19113 662 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 CDC27P30260 824 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 CDR1P51861 262 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 EOGTQ5NDL2 527 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 ANO5Q75V66 913 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 RSRC2Q7L4I2 434 aaKnown RBP8.17□□□□□ -1.1
GNE-205ENST00000539815 TAS1R1Q7RTX1 841 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms